RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 PAPOLAP51003 745 aaKnown RBP4.8□□□□□ -1.64
VPS13D-207ENST00000476169 ADCY7P51828 1080 aa4.8□□□□□ -1.64
VPS13D-207ENST00000476169 CLNS1AP54105 237 aaKnown RBP4.8□□□□□ -1.64
VPS13D-207ENST00000476169 APBA1Q02410 837 aa4.8□□□□□ -1.64
VPS13D-207ENST00000476169 TRPC3Q13507 836 aa4.8□□□□□ -1.64
VPS13D-207ENST00000476169 CCNG2Q16589 344 aa4.8□□□□□ -1.64
VPS13D-207ENST00000476169 TBR1Q16650 682 aa4.8□□□□□ -1.64
VPS13D-207ENST00000476169 ZNF568Q3ZCX4 644 aa4.8□□□□□ -1.64
VPS13D-207ENST00000476169 VWA3BQ502W6 1294 aa4.8□□□□□ -1.64
VPS13D-207ENST00000476169 FBXO47Q5MNV8 452 aa4.8□□□□□ -1.64
VPS13D-207ENST00000476169 SPATA1Q5VX52 437 aa4.8□□□□□ -1.64
VPS13D-207ENST00000476169 RRAGBQ5VZM2 374 aa4.8□□□□□ -1.64
VPS13D-207ENST00000476169 AFMIDQ63HM1 303 aa4.8□□□□□ -1.64
VPS13D-207ENST00000476169 FAM90A1Q86YD7 464 aa4.8□□□□□ -1.64
VPS13D-207ENST00000476169 PLXDC1Q8IUK5 500 aa4.8□□□□□ -1.64
VPS13D-207ENST00000476169 FTSJ3Q8IY81 847 aaKnown RBP4.8□□□□□ -1.64
VPS13D-207ENST00000476169 ADGRG2Q8IZP9 1017 aa4.8□□□□□ -1.64
VPS13D-207ENST00000476169 CMTM4Q8IZR5 234 aa4.8□□□□□ -1.64
VPS13D-207ENST00000476169 TXNDC5Q8NBS9 432 aaKnown RBP4.8□□□□□ -1.64
VPS13D-207ENST00000476169 CCDC150Q8NCX0 1101 aa4.8□□□□□ -1.64
VPS13D-207ENST00000476169 OR10H5Q8NGA6 315 aa4.8□□□□□ -1.64
VPS13D-207ENST00000476169 STYXQ8WUJ0 223 aa4.8□□□□□ -1.64
VPS13D-207ENST00000476169 TNPO1Q92973 898 aaKnown RBP4.8□□□□□ -1.64
VPS13D-207ENST00000476169 SERINC2Q96SA4 455 aa4.8□□□□□ -1.64
VPS13D-207ENST00000476169 P2RX7Q99572 595 aaKnown RBP4.8□□□□□ -1.64
VPS13D-207ENST00000476169 SLAMF7Q9NQ25 335 aa4.8□□□□□ -1.64
VPS13D-207ENST00000476169 STK32BQ9NY57 414 aa4.8□□□□□ -1.64
VPS13D-207ENST00000476169 KIF17Q9P2E2 1029 aa4.8□□□□□ -1.64
VPS13D-207ENST00000476169 CNOT6Q9ULM6 557 aaKnown RBP4.8□□□□□ -1.64
VPS13D-207ENST00000476169 NR2E1Q9Y466 385 aa4.8□□□□□ -1.64
VPS13D-207ENST00000476169 ATRNL1Q5VV63 1379 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 A0A1B0GTL3 188 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 FAM234BA2RU67 622 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 SH3D21A4FU49 640 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 HMX3A6NHT5 357 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 C9orf118A6NHY6 69 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 TSPY2A6NKD2 308 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 RFXAPO00287 272 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 PIP5K1BO14986 540 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 AREL1O15033 823 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 GRM6O15303 877 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 TBC1D4O60343 1298 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 TNFRSF6BO95407 300 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 RPN1P04843 607 aaKnown RBP4.79□□□□□ -1.64
VPS13D-207ENST00000476169 ANXA2P07355 339 aaKnown RBP4.79□□□□□ -1.64
VPS13D-207ENST00000476169 GNAI3P08754 354 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 TSPY3P0CV98 308 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 TSPY8P0CW00 308 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 MTHFD1P11586 935 aaKnown RBP4.79□□□□□ -1.64
VPS13D-207ENST00000476169 RPS6KB1P23443 525 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 ADD2P35612 726 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 FLT3LGP49771 235 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 GZMKP49863 264 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 NPEPPSP55786 919 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 SOX8P57073 446 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 GNAI1P63096 354 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 TSPY1Q01534 308 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 PTH1RQ03431 593 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 HGFACQ04756 655 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 EXOSC9Q06265 439 aaKnown RBP4.79□□□□□ -1.64
VPS13D-207ENST00000476169 FOXO1Q12778 655 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 NBPF8Q3BBV2 869 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 PABPC1LQ4VXU2 614 aaKnown RBP4.79□□□□□ -1.64
VPS13D-207ENST00000476169 SLC44A4Q53GD3 710 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 FAM47AQ5JRC9 791 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 FAM26FQ5R3K3 315 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 MFSD14BQ5SR56 506 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 C1QTNF12Q5T7M4 302 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 MFSD4BQ5TF39 518 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 SPOCD1Q6ZMY3 1216 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 RNF44Q7L0R7 432 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 MOGAT3Q86VF5 341 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 CREBRFQ8IUR6 639 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 CARFQ8N187 725 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 TTC30BQ8N4P2 665 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 TCP11L2Q8N4U5 519 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 OR6B3Q8NGW1 331 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 FAM71BQ8TC56 605 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 KBTBD7Q8WVZ9 684 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 RILPL2Q969X0 211 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 MAELQ96JY0 434 aaKnown RBP4.79□□□□□ -1.64
VPS13D-207ENST00000476169 MSLNLQ96KJ4 702 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 SNX22Q96L94 193 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 TIGD1Q96MW7 591 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 STK31Q9BXU1 1019 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 PACSIN1Q9BY11 444 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 SMYD2Q9NRG4 433 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 TBC1D23Q9NUY8 699 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 SIDT1Q9NXL6 827 aaKnown RBP4.79□□□□□ -1.64
VPS13D-207ENST00000476169 COL20A1Q9P218 1284 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 ARHGAP26Q9UNA1 814 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 KCTD3Q9Y597 815 aa4.79□□□□□ -1.64
VPS13D-207ENST00000476169 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.79□□□□□ -1.64
VPS13D-207ENST00000476169 ZMYM3Q14202 1370 aa4.78□□□□□ -1.64
VPS13D-207ENST00000476169 SYNDIG1LA6NDD5 238 aa4.78□□□□□ -1.64
VPS13D-207ENST00000476169 TCAF2A6NFQ2 919 aa4.78□□□□□ -1.64
VPS13D-207ENST00000476169 KIAA0391O15091 583 aaKnown RBP4.78□□□□□ -1.64
VPS13D-207ENST00000476169 ZBED4O75132 1171 aa4.78□□□□□ -1.64
VPS13D-207ENST00000476169 MATN4O95460 622 aa4.78□□□□□ -1.64
VPS13D-207ENST00000476169 DDX58O95786 925 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms