RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 GNA11P29992 359 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 METAP2P50579 478 aaKnown RBP eCLIP4.71□□□□□ -1.66
VPS13D-206ENST00000476045 MRPS6P82932 125 aaKnown RBP4.71□□□□□ -1.66
VPS13D-206ENST00000476045 AKAP17AQ02040 695 aaKnown RBP4.71□□□□□ -1.66
VPS13D-206ENST00000476045 SP2Q02086 613 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 EGR3Q06889 387 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 RESTQ13127 1097 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 PFKFB3Q16875 520 aaPredicted RBP4.71□□□□□ -1.66
VPS13D-206ENST00000476045 USP17L6PQ6QN14 398 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 Q6ZUG5 572 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 PLPPR4Q7Z2D5 763 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 NT5DC4Q86YG4 428 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 CREG2Q8IUH2 290 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 CKAP2LQ8IYA6 745 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 CMTR2Q8IYT2 770 aaKnown RBP4.71□□□□□ -1.66
VPS13D-206ENST00000476045 LILRA2Q8N149 483 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 NME8Q8N427 588 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 TAB3Q8N5C8 712 aaPredicted RBP4.71□□□□□ -1.66
VPS13D-206ENST00000476045 FAM184AQ8NB25 1140 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 DAGLBQ8NCG7 672 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 DBF4BQ8NFT6 615 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 LINC01599Q8WXQ3 324 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 BRF1Q92994 677 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 P2RX5Q93086 422 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 TOP1MTQ969P6 601 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 SPATA32Q96LK8 384 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 MXRA8Q9BRK3 442 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 FUCA2Q9BTY2 467 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 NUP62CLQ9H1M0 184 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 RNPEPQ9H4A4 650 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 NSUN3Q9H649 340 aaKnown RBP4.71□□□□□ -1.66
VPS13D-206ENST00000476045 UBE2ZQ9H832 354 aaPredicted RBP4.71□□□□□ -1.66
VPS13D-206ENST00000476045 C1orf112Q9NSG2 853 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 PRR13Q9NZ81 148 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 UBP1Q9NZI7 540 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 PRKAG3Q9UGI9 489 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 PYCARDQ9ULZ3 195 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 PCDHA2Q9Y5H9 948 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 TRPV2Q9Y5S1 764 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 DENND4AQ7Z401 1863 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 IGSF9BQ9UPX0 1349 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 RIF1Q5UIP0 2472 aaKnown RBP4.7□□□□□ -1.66
VPS13D-206ENST00000476045 FAM186AA6NE01 2351 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 KLF18A0A0U1RQI7 1052 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 SMIM35A0A1B0GVV1 85 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 LCHNA4D1U4 455 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 EPOPA6NHQ4 379 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 H3BNC9 293 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 H3BQV1 296 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 MEIS1O00470 390 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 HBP1O60381 514 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 MMP1P03956 469 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 CYP3A4P08684 503 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 SRGAP2BP0DMP2 458 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 CCDC192P0DO97 292 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 MED14OSP0DP75 135 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 GHRP10912 638 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 SCG2P13521 617 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 RAC2P15153 192 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 CTNNB1P35222 781 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 JAK3P52333 1124 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 TERF1P54274 439 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 ACTR2P61160 394 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 CCT2P78371 535 aaKnown RBP4.7□□□□□ -1.66
VPS13D-206ENST00000476045 SP4Q02446 784 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 CEBPZQ03701 1054 aaKnown RBP4.7□□□□□ -1.66
VPS13D-206ENST00000476045 MGAT3Q09327 533 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 APOBRQ0VD83 1088 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 PAK2Q13177 524 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 GPNMBQ14956 572 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 NOLC1Q14978 699 aaKnown RBP eCLIP4.7□□□□□ -1.66
VPS13D-206ENST00000476045 MLANAQ16655 118 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 UBE2SQ16763 222 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 KRTAP19-4Q3LI73 84 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 LEXMQ3ZCV2 418 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 EPC2Q52LR7 807 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 ARSHQ5FYA8 562 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 ZNF484Q5JVG2 852 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 FBXO47Q5MNV8 452 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 UTP14CQ5TAP6 766 aaKnown RBP4.7□□□□□ -1.66
VPS13D-206ENST00000476045 MIS18BP1Q6P0N0 1132 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 CPLX2Q6PUV4 134 aaKnown RBP4.7□□□□□ -1.66
VPS13D-206ENST00000476045 NLRC3Q7RTR2 1065 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 TMEM192Q8IY95 271 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 PHACTR4Q8IZ21 702 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 FIBCD1Q8N539 461 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 RDM1Q8NG50 284 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 ATP8B4Q8TF62 1192 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 LEO1Q8WVC0 666 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-206ENST00000476045 PIBF1Q8WXW3 757 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 PPM1EQ8WY54 764 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 PABPC5Q96DU9 382 aaKnown RBP4.7□□□□□ -1.66
VPS13D-206ENST00000476045 EAF1Q96JC9 268 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-206ENST00000476045 PGBD1Q96JS3 809 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 MAP7D2Q96T17 732 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 PPP1R16BQ96T49 567 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 RNF26Q9BY78 433 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-206ENST00000476045 TGIF2Q9GZN2 237 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 ZMYND12Q9H0C1 365 aa4.7□□□□□ -1.66
VPS13D-206ENST00000476045 TNMDQ9H2S6 317 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms