RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 MRPL44Q9H9J2 332 aaKnown RBP7.6□□□□□ -1.19
HDAC3-207ENST00000475549 IL21Q9HBE4 155 aa7.6□□□□□ -1.19
HDAC3-207ENST00000475549 ASAH2Q9NR71 780 aa7.6□□□□□ -1.19
HDAC3-207ENST00000475549 TMLHEQ9NVH6 421 aa7.6□□□□□ -1.19
HDAC3-207ENST00000475549 SPATA6Q9NWH7 488 aaPredicted RBP7.6□□□□□ -1.19
HDAC3-207ENST00000475549 STK17AQ9UEE5 414 aa7.6□□□□□ -1.19
HDAC3-207ENST00000475549 KPNA7A9QM74 516 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 CYB561D2O14569 222 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 XPOTO43592 962 aaKnown RBP7.59□□□□□ -1.19
HDAC3-207ENST00000475549 HCRTO43612 131 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 CHRNB1P11230 501 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 ODC1P11926 461 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 PDCP20941 246 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 ALDH1A3P47895 512 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 SOX9P48436 509 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 EPHB3P54753 998 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 POU5F1Q01860 360 aaKnown RBP7.59□□□□□ -1.19
HDAC3-207ENST00000475549 E2F4Q16254 413 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 CCDC142Q17RM4 750 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 ZNF528Q3MIS6 628 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 SLC39A12Q504Y0 691 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 L1TD1Q5T7N2 865 aaKnown RBP7.59□□□□□ -1.19
HDAC3-207ENST00000475549 ARMCX5Q6P1M9 558 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 TXNDC11Q6PKC3 985 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 MAMSTRQ6ZN01 415 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 SV2BQ7L1I2 683 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 ELMOD1Q8N336 334 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 C1orf127Q8N9H9 656 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 LEMD2Q8NC56 503 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 STKLD1Q8NE28 680 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 POMGNT1Q8WZA1 660 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 FAM3CQ92520 227 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 DNASE1L2Q92874 299 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 IRF7Q92985 503 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 HPS3Q969F9 1004 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 RMDN1Q96DB5 314 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 SAAL1Q96ER3 474 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 INTS4Q96HW7 963 aaKnown RBP7.59□□□□□ -1.19
HDAC3-207ENST00000475549 ZFYVE19Q96K21 471 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 PYM1Q9BRP8 204 aaKnown RBP7.59□□□□□ -1.19
HDAC3-207ENST00000475549 CBWD1Q9BRT8 395 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 FAM213AQ9BRX8 229 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 SLC46A2Q9BY10 475 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 SMG9Q9H0W8 520 aaKnown RBP7.59□□□□□ -1.19
HDAC3-207ENST00000475549 ATXN3LQ9H3M9 355 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 PRMT8Q9NR22 394 aaPredicted RBP7.59□□□□□ -1.19
HDAC3-207ENST00000475549 OLFML3Q9NRN5 406 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 C2orf42Q9NWW7 574 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 HSFX1Q9UBD0 423 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 CCDC39Q9UFE4 941 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 SIX4Q9UIU6 781 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 FBXO4Q9UKT5 387 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 NDRG2Q9UN36 371 aaKnown RBP7.59□□□□□ -1.19
HDAC3-207ENST00000475549 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.59□□□□□ -1.19
HDAC3-207ENST00000475549 PIAS3Q9Y6X2 628 aa7.59□□□□□ -1.19
HDAC3-207ENST00000475549 MORC2Q9Y6X9 1032 aaPredicted RBP7.59□□□□□ -1.19
HDAC3-207ENST00000475549 MTCL1Q9Y4B5 1905 aaKnown RBP7.58□□□□□ -1.2
HDAC3-207ENST00000475549 GOLGA8IPA6NC78 632 aa7.58□□□□□ -1.2
HDAC3-207ENST00000475549 OTOL1A6NHN0 477 aaPredicted RBP7.58□□□□□ -1.2
HDAC3-207ENST00000475549 GOLGA8JA6NMD2 632 aa7.58□□□□□ -1.2
HDAC3-207ENST00000475549 ZNF263O14978 683 aa7.58□□□□□ -1.2
HDAC3-207ENST00000475549 LAMTOR5O43504 91 aa7.58□□□□□ -1.2
HDAC3-207ENST00000475549 LILRB5O75023 590 aa7.58□□□□□ -1.2
HDAC3-207ENST00000475549 PRPF6O94906 941 aaKnown RBP7.58□□□□□ -1.2
HDAC3-207ENST00000475549 PRAMEF12O95522 483 aa7.58□□□□□ -1.2
HDAC3-207ENST00000475549 HAPLN1P10915 354 aaPredicted RBP7.58□□□□□ -1.2
HDAC3-207ENST00000475549 HMGA1P17096 107 aaKnown RBP7.58□□□□□ -1.2
HDAC3-207ENST00000475549 TGM1P22735 817 aa7.58□□□□□ -1.2
HDAC3-207ENST00000475549 PAX3P23760 479 aa7.58□□□□□ -1.2
HDAC3-207ENST00000475549 CCNE1P24864 410 aa7.58□□□□□ -1.2
HDAC3-207ENST00000475549 GABRR2P28476 465 aa7.58□□□□□ -1.2
HDAC3-207ENST00000475549 ABCD1P33897 745 aa7.58□□□□□ -1.2
HDAC3-207ENST00000475549 NASPP49321 788 aaPredicted RBP7.58□□□□□ -1.2
HDAC3-207ENST00000475549 GPR15P49685 360 aa7.58□□□□□ -1.2
HDAC3-207ENST00000475549 TAF6P49848 677 aa7.58□□□□□ -1.2
HDAC3-207ENST00000475549 MLLT6P55198 1093 aaPredicted RBP7.58□□□□□ -1.2
HDAC3-207ENST00000475549 TNK2Q07912 1038 aa7.58□□□□□ -1.2
HDAC3-207ENST00000475549 PLD1Q13393 1074 aa7.58□□□□□ -1.2
HDAC3-207ENST00000475549 POSTNQ15063 836 aa7.58□□□□□ -1.2
HDAC3-207ENST00000475549 OSTM1Q86WC4 334 aa7.58□□□□□ -1.2
HDAC3-207ENST00000475549 KIAA2013Q8IYS2 634 aa7.58□□□□□ -1.2
HDAC3-207ENST00000475549 PDCL2Q8N4E4 241 aa7.58□□□□□ -1.2
HDAC3-207ENST00000475549 PDILTQ8N807 584 aa7.58□□□□□ -1.2
HDAC3-207ENST00000475549 LINC00301Q8NCQ3 95 aa7.58□□□□□ -1.2
HDAC3-207ENST00000475549 TTC8Q8TAM2 541 aa7.58□□□□□ -1.2
HDAC3-207ENST00000475549 RIN3Q8TB24 985 aa7.58□□□□□ -1.2
HDAC3-207ENST00000475549 GIPC2Q8TF65 315 aa7.58□□□□□ -1.2
HDAC3-207ENST00000475549 CHFRQ96EP1 664 aa7.58□□□□□ -1.2
HDAC3-207ENST00000475549 ACCSQ96QU6 501 aa7.58□□□□□ -1.2
HDAC3-207ENST00000475549 PKMYT1Q99640 499 aa7.58□□□□□ -1.2
HDAC3-207ENST00000475549 SEPT5Q99719 369 aaPredicted RBP7.58□□□□□ -1.2
HDAC3-207ENST00000475549 GPR88Q9GZN0 384 aa7.58□□□□□ -1.2
HDAC3-207ENST00000475549 CHRDQ9H2X0 955 aa7.58□□□□□ -1.2
HDAC3-207ENST00000475549 PCIF1Q9H4Z3 704 aa7.58□□□□□ -1.2
HDAC3-207ENST00000475549 LMAN1LQ9HAT1 526 aa7.58□□□□□ -1.2
HDAC3-207ENST00000475549 PDE11AQ9HCR9 933 aa7.58□□□□□ -1.2
HDAC3-207ENST00000475549 RBM12Q9NTZ6 932 aaKnown RBP7.58□□□□□ -1.2
HDAC3-207ENST00000475549 PANK4Q9NVE7 773 aa7.58□□□□□ -1.2
HDAC3-207ENST00000475549 ZSCAN32Q9NX65 697 aa7.58□□□□□ -1.2
HDAC3-207ENST00000475549 GTSE1Q9NYZ3 720 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms