RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 ITGB1P05556 798 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 ADRB2P07550 413 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 GALTP07902 379 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 MYBL2P10244 700 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 HARSP12081 509 aaKnown RBP4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 CYP3A5P20815 502 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 MAGEA9P43362 315 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 NAP1L1P55209 391 aaKnown RBP4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 ARID5AQ03989 594 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 C2orf54Q08AI8 447 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 TUSC3Q13454 348 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 SURF1Q15526 300 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 ENOX2Q16206 610 aaKnown RBP4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 KNOP1Q1ED39 458 aaKnown RBP4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 ASTE1Q2TB18 679 aaPredicted RBP4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 ZCWPW2Q504Y3 356 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 HGSNATQ68CP4 663 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 SLC39A4Q6P5W5 647 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 CCNI2Q6ZMN8 369 aaPredicted RBP4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 HS2ST1Q7LGA3 356 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 DDX53Q86TM3 631 aaKnown RBP4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 NT5DC4Q86YG4 428 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 C12orf56Q8IXR9 622 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 KLHL23Q8NBE8 558 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 HDAC7Q8WUI4 952 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 TMEM174Q8WUU8 243 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 MYLIPQ8WY64 445 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 EXOC4Q96A65 974 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 IQCDQ96DY2 449 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 TMEM169Q96HH4 297 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 IGSF21Q96ID5 467 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 ZBTB45Q96K62 511 aaPredicted RBP4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 PPP1R10Q96QC0 940 aaKnown RBP4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 CDCA3Q99618 268 aaPredicted RBP4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 TSGA10Q9BZW7 698 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 ASB7Q9H672 318 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 CERS4Q9HA82 394 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 NGRNQ9NPE2 291 aaKnown RBP4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 SMARCAL1Q9NZC9 954 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 KLK14Q9P0G3 267 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 CPSF3Q9UKF6 684 aaKnown RBP4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 MTUS1Q9ULD2 1270 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 SNX12Q9UMY4 172 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 USP20Q9Y2K6 914 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 SMIM28A0A1B0GU29 152 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 EPOPA6NHQ4 379 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 ANKRD63C9JTQ0 380 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 TMEM189-UBE2V1I3L0A0 370 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 NRP1O14786 923 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 FSCN2O14926 492 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 DDHD2O94830 711 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 LCA5LO95447 670 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 IGFBP4P22692 258 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 RPL9P32969 192 aaKnown RBP4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 OR1G1P47890 313 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 SLC11A1P49279 550 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 CASP5P51878 434 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 POLR2FP61218 127 aaKnown RBP4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 CREMQ03060 361 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 CKAP4Q07065 602 aaKnown RBP4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 ELAVL2Q12926 359 aaKnown RBP4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 MYBPC2Q14324 1141 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 TDRD12Q587J7 1177 aaKnown RBP4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 HSP90B2PQ58FF3 399 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 PDXDC1Q6P996 788 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 ZNF280BQ86YH2 543 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 GPR65Q8IYL9 337 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 GPD1LQ8N335 351 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 MICALL1Q8N3F8 863 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 BEST2Q8NFU1 509 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 SPPL3Q8TCT6 385 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 SCFD1Q8WVM8 642 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 RPGRIP1Q96KN7 1286 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 ZFP42Q96MM3 310 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 LRRC1Q9BTT6 524 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 HERC2P3Q9BVR0 1158 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 HAPLN2Q9GZV7 340 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 NSUN3Q9H649 340 aaKnown RBP4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 TLR9Q9NR96 1032 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 MIOSQ9NXC5 875 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 EHD2Q9NZN4 543 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 ADAMTS1Q9UHI8 967 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 MTCH2Q9Y6C9 303 aa4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 PDCD11Q14690 1871 aaKnown RBP4.47□□□□□ -1.69
GAPVD1-216ENST00000474637 TARSL2A2RTX5 802 aaKnown RBP4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 LACTBL1A8MY62 500 aa4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 PDXKO00764 312 aa4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 CITO14578 2027 aa4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 PTGESO14684 152 aa4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 TRAPPC3O43617 180 aa4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 FAM189A1O60320 539 aa4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 SYF2O95926 243 aaKnown RBP4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 IVLP07476 585 aa4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 CCDC172P0C7W6 258 aa4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 SRGAP2BP0DMP2 458 aa4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 PRLRP16471 622 aa4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 MCM3P25205 808 aa4.46□□□□□ -1.69
GAPVD1-216ENST00000474637 BRD2P25440 801 aaKnown RBP4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms