RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 ADCY6O43306 1168 aa23.08■■□□□ 1.28
CCM2-206ENST00000474617 HOXC8P31273 242 aa23.08■■□□□ 1.28
CCM2-206ENST00000474617 MARCKSL1P49006 195 aa23.08■■□□□ 1.28
CCM2-206ENST00000474617 COPS2P61201 443 aa23.08■■□□□ 1.28
CCM2-206ENST00000474617 PTPN11Q06124 597 aaPredicted RBP23.08■■□□□ 1.28
CCM2-206ENST00000474617 DUPD1Q68J44 220 aa23.08■■□□□ 1.28
CCM2-206ENST00000474617 TAF2Q6P1X5 1199 aa23.08■■□□□ 1.28
CCM2-206ENST00000474617 CDR2LQ86X02 465 aaPredicted RBP23.08■■□□□ 1.28
CCM2-206ENST00000474617 BEST2Q8NFU1 509 aa23.08■■□□□ 1.28
CCM2-206ENST00000474617 TMEM176AQ96HP8 235 aa23.08■■□□□ 1.28
CCM2-206ENST00000474617 RBM41Q96IZ5 413 aaKnown RBP23.08■■□□□ 1.28
CCM2-206ENST00000474617 BTBD6Q96KE9 485 aa23.08■■□□□ 1.28
CCM2-206ENST00000474617 TCRBV5S1A1TA0A578 114 aa23.07■■□□□ 1.28
CCM2-206ENST00000474617 A6NNZ2 444 aa23.07■■□□□ 1.28
CCM2-206ENST00000474617 DUSP11O75319 330 aaKnown RBP23.07■■□□□ 1.28
CCM2-206ENST00000474617 BRD2P25440 801 aaKnown RBP23.07■■□□□ 1.28
CCM2-206ENST00000474617 RAD23BP54727 409 aa23.07■■□□□ 1.28
CCM2-206ENST00000474617 SNX16P57768 344 aa23.07■■□□□ 1.28
CCM2-206ENST00000474617 ACAP1Q15027 740 aa23.07■■□□□ 1.28
CCM2-206ENST00000474617 CNGA2Q16280 664 aa23.07■■□□□ 1.28
CCM2-206ENST00000474617 KIZQ2M2Z5 673 aa23.07■■□□□ 1.28
CCM2-206ENST00000474617 TUBB8Q3ZCM7 444 aa23.07■■□□□ 1.28
CCM2-206ENST00000474617 JAMLQ86YT9 394 aa23.07■■□□□ 1.28
CCM2-206ENST00000474617 IQCKQ8N0W5 287 aa23.07■■□□□ 1.28
CCM2-206ENST00000474617 KIF12Q96FN5 646 aa23.07■■□□□ 1.28
CCM2-206ENST00000474617 DDX27Q96GQ7 796 aaKnown RBP23.07■■□□□ 1.28
CCM2-206ENST00000474617 SNX27Q96L92 541 aa23.07■■□□□ 1.28
CCM2-206ENST00000474617 NMRK2Q9NPI5 230 aa23.07■■□□□ 1.28
CCM2-206ENST00000474617 DDX56Q9NY93 547 aaKnown RBP23.07■■□□□ 1.28
CCM2-206ENST00000474617 PASKQ96RG2 1323 aa23.07■■□□□ 1.28
CCM2-206ENST00000474617 ESYT3A0FGR9 886 aa23.06■■□□□ 1.28
CCM2-206ENST00000474617 C17orf102A2RUQ5 167 aa23.06■■□□□ 1.28
CCM2-206ENST00000474617 POLR3GO15318 223 aaPredicted RBP23.06■■□□□ 1.28
CCM2-206ENST00000474617 SYF2O95926 243 aaKnown RBP23.06■■□□□ 1.28
CCM2-206ENST00000474617 ALDH1A1P00352 501 aa23.06■■□□□ 1.28
CCM2-206ENST00000474617 CD4P01730 458 aa23.06■■□□□ 1.28
CCM2-206ENST00000474617 CD19P15391 556 aa23.06■■□□□ 1.28
CCM2-206ENST00000474617 HOXA11P31270 313 aaPredicted RBP23.06■■□□□ 1.28
CCM2-206ENST00000474617 CRYBB1P53674 252 aaPredicted RBP23.06■■□□□ 1.28
CCM2-206ENST00000474617 ZNF268Q14587 947 aaPredicted RBP23.06■■□□□ 1.28
CCM2-206ENST00000474617 PPP1R15BQ5SWA1 713 aa23.06■■□□□ 1.28
CCM2-206ENST00000474617 DCUN1D2Q6PH85 259 aa23.06■■□□□ 1.28
CCM2-206ENST00000474617 CCDC137Q6PK04 289 aaKnown RBP23.06■■□□□ 1.28
CCM2-206ENST00000474617 SCARA5Q6ZMJ2 495 aa23.06■■□□□ 1.28
CCM2-206ENST00000474617 RCOR2Q8IZ40 523 aa23.06■■□□□ 1.28
CCM2-206ENST00000474617 FLRT1Q9NZU1 646 aa23.06■■□□□ 1.28
CCM2-206ENST00000474617 CNTN3Q9P232 1028 aa23.06■■□□□ 1.28
CCM2-206ENST00000474617 CHORDC1Q9UHD1 332 aaPredicted RBP23.06■■□□□ 1.28
CCM2-206ENST00000474617 AGAP1Q9UPQ3 857 aa23.06■■□□□ 1.28
CCM2-206ENST00000474617 CITO14578 2027 aa23.06■■□□□ 1.28
CCM2-206ENST00000474617 RNF40O75150 1001 aa23.05■■□□□ 1.28
CCM2-206ENST00000474617 CALCAP01258 141 aa23.05■■□□□ 1.28
CCM2-206ENST00000474617 ECHS1P30084 290 aa23.05■■□□□ 1.28
CCM2-206ENST00000474617 PTPN7P35236 360 aa23.05■■□□□ 1.28
CCM2-206ENST00000474617 COILP38432 576 aaPredicted RBP23.05■■□□□ 1.28
CCM2-206ENST00000474617 GGCXP38435 758 aa23.05■■□□□ 1.28
CCM2-206ENST00000474617 TM4SF4P48230 202 aa23.05■■□□□ 1.28
CCM2-206ENST00000474617 MRPS25P82663 173 aaKnown RBP23.05■■□□□ 1.28
CCM2-206ENST00000474617 FSCN1Q16658 493 aaKnown RBP23.05■■□□□ 1.28
CCM2-206ENST00000474617 POLNQ7Z5Q5 900 aa23.05■■□□□ 1.28
CCM2-206ENST00000474617 TRIM6Q9C030 488 aaPredicted RBP23.05■■□□□ 1.28
CCM2-206ENST00000474617 FAM49AQ9H0Q0 323 aaPredicted RBP23.05■■□□□ 1.28
CCM2-206ENST00000474617 TSPYL1Q9H0U9 437 aa23.05■■□□□ 1.28
CCM2-206ENST00000474617 VPS18Q9P253 973 aa23.05■■□□□ 1.28
CCM2-206ENST00000474617 POLIQ9UNA4 740 aa23.05■■□□□ 1.28
CCM2-206ENST00000474617 TLL2Q9Y6L7 1015 aa23.05■■□□□ 1.28
CCM2-206ENST00000474617 ZSCAN5CA6NGD5 496 aaPredicted RBP23.04■■□□□ 1.28
CCM2-206ENST00000474617 DCAF8L1A6NGE4 600 aa23.04■■□□□ 1.28
CCM2-206ENST00000474617 SIGLEC16A6NMB1 481 aa23.04■■□□□ 1.28
CCM2-206ENST00000474617 MEFVO15553 781 aaPredicted RBP23.04■■□□□ 1.28
CCM2-206ENST00000474617 NPTXRO95502 500 aa23.04■■□□□ 1.28
CCM2-206ENST00000474617 CFHP08603 1231 aa23.04■■□□□ 1.28
CCM2-206ENST00000474617 PNPLA4P41247 253 aa23.04■■□□□ 1.28
CCM2-206ENST00000474617 PTGIRP43119 386 aa23.04■■□□□ 1.28
CCM2-206ENST00000474617 NKX3-2P78367 333 aa23.04■■□□□ 1.28
CCM2-206ENST00000474617 LMNB2Q03252 620 aa23.04■■□□□ 1.28
CCM2-206ENST00000474617 SGO2Q562F6 1265 aa23.04■■□□□ 1.28
CCM2-206ENST00000474617 SLC4A11Q8NBS3 891 aa23.04■■□□□ 1.28
CCM2-206ENST00000474617 TFAP2BQ92481 460 aa23.04■■□□□ 1.28
CCM2-206ENST00000474617 UBQLN1Q9UMX0 589 aaKnown RBP23.04■■□□□ 1.28
CCM2-206ENST00000474617 AGPSO00116 658 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 DAPK3O43293 454 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 CSDE1O75534 798 aaKnown RBP23.03■■□□□ 1.28
CCM2-206ENST00000474617 ECEL1O95672 775 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 MYL3P08590 195 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 SETSIPP0DME0 302 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 CYP2B6P20813 491 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 CYP2C19P33261 490 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 GABRB2P47870 512 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 FCGRTP55899 365 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 SIX1Q15475 284 aaPredicted RBP23.03■■□□□ 1.28
CCM2-206ENST00000474617 ZBTB6Q15916 424 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 PRAMEF19Q5SWL8 479 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 MFSD14CQ5VZR4 134 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 UNC93AQ86WB7 457 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 C18orf8Q96DM3 657 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 GDAP1L1Q96MZ0 367 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 PPP1R16BQ96T49 567 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 FMO2Q99518 471 aa23.03■■□□□ 1.28
CCM2-206ENST00000474617 NT5C1AQ9BXI3 368 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms