RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 SCN1AP35498 2009 aa17.21■□□□□ 0.35
ITGB1-210ENST00000474568 PRR33A8MZF0 331 aa17.21■□□□□ 0.35
ITGB1-210ENST00000474568 PDXKO00764 312 aa17.21■□□□□ 0.35
ITGB1-210ENST00000474568 HCRTO43612 131 aa17.21■□□□□ 0.35
ITGB1-210ENST00000474568 CALUO43852 315 aaPredicted RBP17.21■□□□□ 0.35
ITGB1-210ENST00000474568 CLSTN1O94985 981 aa17.21■□□□□ 0.35
ITGB1-210ENST00000474568 POU2F2P09086 479 aa17.21■□□□□ 0.35
ITGB1-210ENST00000474568 LAMP2P13473 410 aa17.21■□□□□ 0.35
ITGB1-210ENST00000474568 PTPN2P17706 415 aa17.21■□□□□ 0.35
ITGB1-210ENST00000474568 COL9A1P20849 921 aa17.21■□□□□ 0.35
ITGB1-210ENST00000474568 ACAT1P24752 427 aaKnown RBP17.21■□□□□ 0.35
ITGB1-210ENST00000474568 KCNB1Q14721 858 aa17.21■□□□□ 0.35
ITGB1-210ENST00000474568 CENPPQ6IPU0 288 aa17.21■□□□□ 0.35
ITGB1-210ENST00000474568 HFE2Q6ZVN8 426 aa17.21■□□□□ 0.35
ITGB1-210ENST00000474568 OSTM1Q86WC4 334 aa17.21■□□□□ 0.35
ITGB1-210ENST00000474568 ELMOD1Q8N336 334 aa17.21■□□□□ 0.35
ITGB1-210ENST00000474568 ZNF516Q92618 1163 aa17.21■□□□□ 0.35
ITGB1-210ENST00000474568 FGF13Q92913 245 aa17.21■□□□□ 0.35
ITGB1-210ENST00000474568 TCEAL4Q96EI5 215 aa17.21■□□□□ 0.35
ITGB1-210ENST00000474568 MFSD14AQ96MC6 490 aa17.21■□□□□ 0.35
ITGB1-210ENST00000474568 SEPT5Q99719 369 aaPredicted RBP17.21■□□□□ 0.35
ITGB1-210ENST00000474568 ZCWPW1Q9H0M4 648 aa17.21■□□□□ 0.35
ITGB1-210ENST00000474568 DMAC2Q9NW81 257 aa17.21■□□□□ 0.35
ITGB1-210ENST00000474568 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.21■□□□□ 0.351e-6■■□□□ 13.9
ITGB1-210ENST00000474568 EPS15L1Q9UBC2 864 aa17.21■□□□□ 0.35
ITGB1-210ENST00000474568 CDH7Q9ULB5 785 aa17.21■□□□□ 0.35
ITGB1-210ENST00000474568 DENND4AQ7Z401 1863 aa17.2■□□□□ 0.34
ITGB1-210ENST00000474568 MTCL1Q9Y4B5 1905 aaKnown RBP17.2■□□□□ 0.34
ITGB1-210ENST00000474568 LRRIQ3A6PVS8 624 aaPredicted RBP17.2■□□□□ 0.34
ITGB1-210ENST00000474568 NRG2O14511 850 aaPredicted RBP17.2■□□□□ 0.34
ITGB1-210ENST00000474568 NARSO43776 548 aaKnown RBP17.2■□□□□ 0.34
ITGB1-210ENST00000474568 KIF20AO95235 890 aa17.2■□□□□ 0.34
ITGB1-210ENST00000474568 CST3P01034 146 aaPredicted RBP17.2■□□□□ 0.34
ITGB1-210ENST00000474568 MYL4P12829 197 aa17.2■□□□□ 0.34
ITGB1-210ENST00000474568 CEBPBP17676 345 aa17.2■□□□□ 0.34
ITGB1-210ENST00000474568 SIGLEC14Q08ET2 396 aa17.2■□□□□ 0.34
ITGB1-210ENST00000474568 MYO1EQ12965 1108 aa17.2■□□□□ 0.34
ITGB1-210ENST00000474568 BIRC3Q13489 604 aa17.2■□□□□ 0.34
ITGB1-210ENST00000474568 MGAT5BQ3V5L5 792 aa17.2■□□□□ 0.34
ITGB1-210ENST00000474568 RTL10Q7L3V2 364 aa17.2■□□□□ 0.34
ITGB1-210ENST00000474568 LRRTM3Q86VH5 581 aa17.2■□□□□ 0.34
ITGB1-210ENST00000474568 ADGRF2Q8IZF7 708 aa17.2■□□□□ 0.34
ITGB1-210ENST00000474568 ELMO3Q96BJ8 720 aa17.2■□□□□ 0.34
ITGB1-210ENST00000474568 MCRS1Q96EZ8 462 aa17.2■□□□□ 0.34
ITGB1-210ENST00000474568 ZNF512Q96ME7 567 aaPredicted RBP17.2■□□□□ 0.34
ITGB1-210ENST00000474568 TMLHEQ9NVH6 421 aa17.2■□□□□ 0.34
ITGB1-210ENST00000474568 DDX43Q9NXZ2 648 aaKnown RBP17.2■□□□□ 0.34
ITGB1-210ENST00000474568 ABI2Q9NYB9 513 aaPredicted RBP17.2■□□□□ 0.34
ITGB1-210ENST00000474568 CHMP5Q9NZZ3 219 aa17.2■□□□□ 0.34
ITGB1-210ENST00000474568 PHACTR2O75167 634 aa17.19■□□□□ 0.34
ITGB1-210ENST00000474568 PRPF40AO75400 957 aaKnown RBP17.19■□□□□ 0.34
ITGB1-210ENST00000474568 GJA1P17302 382 aa17.19■□□□□ 0.34
ITGB1-210ENST00000474568 DLG4P78352 724 aa17.19■□□□□ 0.34
ITGB1-210ENST00000474568 TSPY1Q01534 308 aa17.19■□□□□ 0.34
ITGB1-210ENST00000474568 TRPC3Q13507 836 aa17.19■□□□□ 0.34
ITGB1-210ENST00000474568 TDGQ13569 410 aa17.19■□□□□ 0.34
ITGB1-210ENST00000474568 CCDC142Q17RM4 750 aa17.19■□□□□ 0.34
ITGB1-210ENST00000474568 SOWAHAQ2M3V2 549 aa17.19■□□□□ 0.34
ITGB1-210ENST00000474568 ISM2Q6H9L7 571 aa17.19■□□□□ 0.34
ITGB1-210ENST00000474568 IQCEQ6IPM2 695 aa17.19■□□□□ 0.34
ITGB1-210ENST00000474568 PDZD4Q76G19 769 aaPredicted RBP17.19■□□□□ 0.34
ITGB1-210ENST00000474568 SLC9A9Q8IVB4 645 aa17.19■□□□□ 0.34
ITGB1-210ENST00000474568 NPAS3Q8IXF0 933 aa17.19■□□□□ 0.34
ITGB1-210ENST00000474568 GUF1Q8N442 669 aaKnown RBP17.19■□□□□ 0.34
ITGB1-210ENST00000474568 SMARCE1Q969G3 411 aa17.19■□□□□ 0.34
ITGB1-210ENST00000474568 PBXIP1Q96AQ6 731 aa17.19■□□□□ 0.34
ITGB1-210ENST00000474568 MMS19Q96T76 1030 aa17.19■□□□□ 0.34
ITGB1-210ENST00000474568 GDAP2Q9NXN4 497 aa17.19■□□□□ 0.34
ITGB1-210ENST00000474568 TRAF3IP3Q9Y228 551 aa17.19■□□□□ 0.34
ITGB1-210ENST00000474568 PCDHA5Q9Y5H7 936 aa17.19■□□□□ 0.34
ITGB1-210ENST00000474568 NUMBLQ9Y6R0 609 aa17.19■□□□□ 0.34
ITGB1-210ENST00000474568 SMC2O95347 1197 aa17.18■□□□□ 0.34
ITGB1-210ENST00000474568 PDGFBP01127 241 aaPredicted RBP17.18■□□□□ 0.34
ITGB1-210ENST00000474568 NR2F2P24468 414 aa17.18■□□□□ 0.34
ITGB1-210ENST00000474568 CCR2P41597 374 aa17.18■□□□□ 0.34
ITGB1-210ENST00000474568 ALDH1A3P47895 512 aa17.18■□□□□ 0.34
ITGB1-210ENST00000474568 EPHB3P54753 998 aa17.18■□□□□ 0.34
ITGB1-210ENST00000474568 MYL6P60660 151 aa17.18■□□□□ 0.34
ITGB1-210ENST00000474568 MYL7Q01449 175 aa17.18■□□□□ 0.34
ITGB1-210ENST00000474568 CYP4A22Q5TCH4 519 aa17.18■□□□□ 0.34
ITGB1-210ENST00000474568 TDRD10Q5VZ19 366 aaKnown RBP17.18■□□□□ 0.34
ITGB1-210ENST00000474568 PARM1Q6UWI2 310 aa17.18■□□□□ 0.34
ITGB1-210ENST00000474568 UBALD2Q8IYN6 164 aa17.18■□□□□ 0.34
ITGB1-210ENST00000474568 DCP1BQ8IZD4 617 aaKnown RBP17.18■□□□□ 0.34
ITGB1-210ENST00000474568 TOP6BLQ8N6T0 577 aa17.18■□□□□ 0.34
ITGB1-210ENST00000474568 FAM200AQ8TCP9 573 aa17.18■□□□□ 0.34
ITGB1-210ENST00000474568 PARD3BQ8TEW8 1205 aa17.18■□□□□ 0.34
ITGB1-210ENST00000474568 ASIC4Q96FT7 647 aa17.18■□□□□ 0.34
ITGB1-210ENST00000474568 EEF2KMTQ96G04 330 aa17.18■□□□□ 0.34
ITGB1-210ENST00000474568 LPIN3Q9BQK8 851 aa17.18■□□□□ 0.34
ITGB1-210ENST00000474568 RPP25Q9BUL9 199 aaKnown RBP17.18■□□□□ 0.34
ITGB1-210ENST00000474568 DNAJC25Q9H1X3 360 aa17.18■□□□□ 0.34
ITGB1-210ENST00000474568 ASAH2Q9NR71 780 aa17.18■□□□□ 0.34
ITGB1-210ENST00000474568 RMND1Q9NWS8 449 aa17.18■□□□□ 0.34
ITGB1-210ENST00000474568 IGSF9Q9P2J2 1179 aa17.18■□□□□ 0.34
ITGB1-210ENST00000474568 MAFFQ9ULX9 164 aa17.18■□□□□ 0.34
ITGB1-210ENST00000474568 FRMD4BQ9Y2L6 1034 aa17.18■□□□□ 0.34
ITGB1-210ENST00000474568 KINO60870 393 aaKnown RBP17.17■□□□□ 0.34
ITGB1-210ENST00000474568 GPR15P49685 360 aa17.17■□□□□ 0.34
ITGB1-210ENST00000474568 PSMC1P62191 440 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms