RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 INCA1Q0VD86 236 aa11.11□□□□□ -0.63
CASC3-204ENST00000474190 TRPC3Q13507 836 aa11.11□□□□□ -0.63
CASC3-204ENST00000474190 KCNC3Q14003 757 aa11.11□□□□□ -0.63
CASC3-204ENST00000474190 SYCP1Q15431 976 aa11.11□□□□□ -0.63
CASC3-204ENST00000474190 EXOC3L4Q17RC7 722 aa11.11□□□□□ -0.63
CASC3-204ENST00000474190 SV2CQ496J9 727 aa11.11□□□□□ -0.63
CASC3-204ENST00000474190 VARS2Q5ST30 1063 aaKnown RBP11.11□□□□□ -0.63
CASC3-204ENST00000474190 KLHDC7AQ5VTJ3 777 aa11.11□□□□□ -0.63
CASC3-204ENST00000474190 GBP6Q6ZN66 633 aa11.11□□□□□ -0.63
CASC3-204ENST00000474190 MRPL43Q8N983 215 aaKnown RBP11.11□□□□□ -0.63
CASC3-204ENST00000474190 VN1R2Q8NFZ6 395 aa11.11□□□□□ -0.63
CASC3-204ENST00000474190 TMEM169Q96HH4 297 aa11.11□□□□□ -0.63
CASC3-204ENST00000474190 FAXDC2Q96IV6 333 aa11.11□□□□□ -0.63
CASC3-204ENST00000474190 ZNF560Q96MR9 790 aa11.11□□□□□ -0.63
CASC3-204ENST00000474190 ZSWIM1Q9BR11 485 aa11.11□□□□□ -0.63
CASC3-204ENST00000474190 TTPALQ9BTX7 342 aa11.11□□□□□ -0.63
CASC3-204ENST00000474190 XPO4Q9C0E2 1151 aaKnown RBP11.11□□□□□ -0.63
CASC3-204ENST00000474190 PLCB1Q9NQ66 1216 aa11.11□□□□□ -0.63
CASC3-204ENST00000474190 TMLHEQ9NVH6 421 aa11.11□□□□□ -0.63
CASC3-204ENST00000474190 IFNKQ9P0W0 207 aa11.11□□□□□ -0.63
CASC3-204ENST00000474190 MTRRQ9UBK8 725 aa11.11□□□□□ -0.63
CASC3-204ENST00000474190 NXF1Q9UBU9 619 aaKnown RBP11.11□□□□□ -0.63
CASC3-204ENST00000474190 A0A1W2PQC6 194 aa11.1□□□□□ -0.63
CASC3-204ENST00000474190 CARNS1A5YM72 827 aa11.1□□□□□ -0.63
CASC3-204ENST00000474190 TNFRSF10AO00220 468 aa11.1□□□□□ -0.63
CASC3-204ENST00000474190 TEX28O15482 410 aa11.1□□□□□ -0.63
CASC3-204ENST00000474190 ATP2C2O75185 946 aa11.1□□□□□ -0.63
CASC3-204ENST00000474190 CILPO75339 1184 aa11.1□□□□□ -0.63
CASC3-204ENST00000474190 CNPP09543 421 aaKnown RBP11.1□□□□□ -0.63
CASC3-204ENST00000474190 FAM163BP0C2L3 166 aa11.1□□□□□ -0.63
CASC3-204ENST00000474190 FOSL2P15408 326 aa11.1□□□□□ -0.63
CASC3-204ENST00000474190 CDK11BP21127 795 aaKnown RBP11.1□□□□□ -0.63
CASC3-204ENST00000474190 GCNT1Q02742 428 aa11.1□□□□□ -0.63
CASC3-204ENST00000474190 UBXN1Q04323 297 aa11.1□□□□□ -0.63
CASC3-204ENST00000474190 MYO1EQ12965 1108 aa11.1□□□□□ -0.63
CASC3-204ENST00000474190 CUL2Q13617 745 aa11.1□□□□□ -0.63
CASC3-204ENST00000474190 COL19A1Q14993 1142 aa11.1□□□□□ -0.63
CASC3-204ENST00000474190 USP41Q3LFD5 358 aa11.1□□□□□ -0.63
CASC3-204ENST00000474190 ZNF667Q5HYK9 610 aa11.1□□□□□ -0.63
CASC3-204ENST00000474190 E4F1Q66K89 784 aaPredicted RBP11.1□□□□□ -0.63
CASC3-204ENST00000474190 IQCEQ6IPM2 695 aa11.1□□□□□ -0.63
CASC3-204ENST00000474190 SLC8B1Q6J4K2 584 aa11.1□□□□□ -0.63
CASC3-204ENST00000474190 LILRA6Q6PI73 481 aa11.1□□□□□ -0.63
CASC3-204ENST00000474190 SCARA5Q6ZMJ2 495 aa11.1□□□□□ -0.63
CASC3-204ENST00000474190 RRAGAQ7L523 313 aa11.1□□□□□ -0.63
CASC3-204ENST00000474190 DPH6Q7L8W6 267 aa11.1□□□□□ -0.63
CASC3-204ENST00000474190 BAP1Q92560 729 aa11.1□□□□□ -0.63
CASC3-204ENST00000474190 TCF25Q9BQ70 676 aa11.1□□□□□ -0.63
CASC3-204ENST00000474190 ELOVL4Q9GZR5 314 aa11.1□□□□□ -0.63
CASC3-204ENST00000474190 CRISPLD1Q9H336 500 aa11.1□□□□□ -0.63
CASC3-204ENST00000474190 DPEP3Q9H4B8 488 aa11.1□□□□□ -0.63
CASC3-204ENST00000474190 CRTAC1Q9NQ79 661 aa11.1□□□□□ -0.63
CASC3-204ENST00000474190 TLR9Q9NR96 1032 aa11.1□□□□□ -0.63
CASC3-204ENST00000474190 TMEM30AQ9NV96 361 aa11.1□□□□□ -0.63
CASC3-204ENST00000474190 APEX2Q9UBZ4 518 aa11.1□□□□□ -0.63
CASC3-204ENST00000474190 FBXL5Q9UKA1 691 aa11.1□□□□□ -0.63
CASC3-204ENST00000474190 BACE2Q9Y5Z0 518 aa11.1□□□□□ -0.63
CASC3-204ENST00000474190 FHOD1Q9Y613 1164 aa11.1□□□□□ -0.63
CASC3-204ENST00000474190 MTCH2Q9Y6C9 303 aa11.1□□□□□ -0.63
CASC3-204ENST00000474190 VWA8A3KMH1 1905 aa11.09□□□□□ -0.63
CASC3-204ENST00000474190 GOLGA6L19H0YKK7 550 aa11.09□□□□□ -0.63
CASC3-204ENST00000474190 CALCAP01258 141 aa11.09□□□□□ -0.63
CASC3-204ENST00000474190 OR4Q2P0C623 313 aa11.09□□□□□ -0.63
CASC3-204ENST00000474190 PNMA6AP0CW24 399 aaPredicted RBP11.09□□□□□ -0.63
CASC3-204ENST00000474190 UCHL3P15374 230 aa11.09□□□□□ -0.63
CASC3-204ENST00000474190 GTF2F1P35269 517 aaKnown RBP eCLIP11.09□□□□□ -0.63
CASC3-204ENST00000474190 GLUD2P49448 558 aa11.09□□□□□ -0.63
CASC3-204ENST00000474190 UBASH3AP57075 661 aa11.09□□□□□ -0.63
CASC3-204ENST00000474190 JAM2P57087 298 aa11.09□□□□□ -0.63
CASC3-204ENST00000474190 RBM10P98175 930 aaKnown RBP11.09□□□□□ -0.63
CASC3-204ENST00000474190 KRT17Q04695 432 aa11.09□□□□□ -0.63
CASC3-204ENST00000474190 ELAVL2Q12926 359 aaKnown RBP11.09□□□□□ -0.63
CASC3-204ENST00000474190 ORC1Q13415 861 aa11.09□□□□□ -0.63
CASC3-204ENST00000474190 FAM171BQ6P995 826 aa11.09□□□□□ -0.63
CASC3-204ENST00000474190 DSTYKQ6XUX3 929 aa11.09□□□□□ -0.63
CASC3-204ENST00000474190 PAQR9Q6ZVX9 377 aa11.09□□□□□ -0.63
CASC3-204ENST00000474190 ADGRF2Q8IZF7 708 aa11.09□□□□□ -0.63
CASC3-204ENST00000474190 SLC4A11Q8NBS3 891 aa11.09□□□□□ -0.63
CASC3-204ENST00000474190 SPATA18Q8TC71 538 aa11.09□□□□□ -0.63
CASC3-204ENST00000474190 RIN2Q8WYP3 895 aaPredicted RBP11.09□□□□□ -0.63
CASC3-204ENST00000474190 SHC3Q92529 594 aa11.09□□□□□ -0.63
CASC3-204ENST00000474190 MRPL38Q96DV4 380 aaKnown RBP11.09□□□□□ -0.63
CASC3-204ENST00000474190 KLHL5Q96PQ7 755 aa11.09□□□□□ -0.63
CASC3-204ENST00000474190 LSM14BQ9BX40 385 aaKnown RBP11.09□□□□□ -0.63
CASC3-204ENST00000474190 ZCWPW1Q9H0M4 648 aa11.09□□□□□ -0.63
CASC3-204ENST00000474190 CYP3A43Q9HB55 503 aa11.09□□□□□ -0.63
CASC3-204ENST00000474190 ACP6Q9NPH0 428 aa11.09□□□□□ -0.63
CASC3-204ENST00000474190 CISHQ9NSE2 258 aa11.09□□□□□ -0.63
CASC3-204ENST00000474190 FNIP2Q9P278 1114 aa11.09□□□□□ -0.63
CASC3-204ENST00000474190 TDRD15B5MCY1 1934 aaKnown RBP11.08□□□□□ -0.64
CASC3-204ENST00000474190 WDR27A2RRH5 827 aa11.08□□□□□ -0.64
CASC3-204ENST00000474190 MYBPHLA2RUH7 354 aa11.08□□□□□ -0.64
CASC3-204ENST00000474190 FOXN3O00409 490 aaPredicted RBP11.08□□□□□ -0.64
CASC3-204ENST00000474190 C2CD2LO14523 706 aa11.08□□□□□ -0.64
CASC3-204ENST00000474190 TRAPPC3O43617 180 aa11.08□□□□□ -0.64
CASC3-204ENST00000474190 CLASP2O75122 1294 aaKnown RBP11.08□□□□□ -0.64
CASC3-204ENST00000474190 ABLIM3O94929 683 aa11.08□□□□□ -0.64
CASC3-204ENST00000474190 PAPLNO95428 1278 aa11.08□□□□□ -0.64
CASC3-204ENST00000474190 CXCL14O95715 111 aa11.08□□□□□ -0.64
CASC3-204ENST00000474190 ODC1P11926 461 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms