RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 ANO9A1A5B4 782 aa12.91□□□□□ -0.34
SMPD4-217ENST00000473720 HEPACAM2A8MVW5 462 aa12.91□□□□□ -0.34
SMPD4-217ENST00000473720 K7ELQ4 463 aaPredicted RBP12.91□□□□□ -0.34
SMPD4-217ENST00000473720 ZNF263O14978 683 aa12.91□□□□□ -0.34
SMPD4-217ENST00000473720 NCAM2O15394 837 aa12.91□□□□□ -0.34
SMPD4-217ENST00000473720 STX6O43752 255 aa12.91□□□□□ -0.34
SMPD4-217ENST00000473720 GAP43P17677 238 aa12.91□□□□□ -0.34
SMPD4-217ENST00000473720 GABRR2P28476 465 aa12.91□□□□□ -0.34
SMPD4-217ENST00000473720 ADSSP30520 456 aa12.91□□□□□ -0.34
SMPD4-217ENST00000473720 TFAMQ00059 246 aaKnown RBP12.91□□□□□ -0.34
SMPD4-217ENST00000473720 POSTNQ15063 836 aa12.91□□□□□ -0.34
SMPD4-217ENST00000473720 TAF12Q16514 161 aa12.91□□□□□ -0.34
SMPD4-217ENST00000473720 L1TD1Q5T7N2 865 aaKnown RBP12.91□□□□□ -0.34
SMPD4-217ENST00000473720 WSCD1Q658N2 575 aa12.91□□□□□ -0.34
SMPD4-217ENST00000473720 TSSK4Q6SA08 328 aa12.91□□□□□ -0.34
SMPD4-217ENST00000473720 CRELD2Q6UXH1 353 aaPredicted RBP12.91□□□□□ -0.34
SMPD4-217ENST00000473720 TMC8Q8IU68 726 aa12.91□□□□□ -0.34
SMPD4-217ENST00000473720 YAF2Q8IY57 180 aa12.91□□□□□ -0.34
SMPD4-217ENST00000473720 THEM5Q8N1Q8 247 aa12.91□□□□□ -0.34
SMPD4-217ENST00000473720 LEMD2Q8NC56 503 aa12.91□□□□□ -0.34
SMPD4-217ENST00000473720 TTC8Q8TAM2 541 aa12.91□□□□□ -0.34
SMPD4-217ENST00000473720 GIPC2Q8TF65 315 aa12.91□□□□□ -0.34
SMPD4-217ENST00000473720 IRF7Q92985 503 aa12.91□□□□□ -0.34
SMPD4-217ENST00000473720 FAM84AQ96KN4 292 aa12.91□□□□□ -0.34
SMPD4-217ENST00000473720 FGFBP2Q9BYJ0 223 aa12.91□□□□□ -0.34
SMPD4-217ENST00000473720 ATXN3LQ9H3M9 355 aa12.91□□□□□ -0.34
SMPD4-217ENST00000473720 PANK4Q9NVE7 773 aa12.91□□□□□ -0.34
SMPD4-217ENST00000473720 ABI2Q9NYB9 513 aaPredicted RBP12.91□□□□□ -0.34
SMPD4-217ENST00000473720 TFIP11Q9UBB9 837 aaKnown RBP12.91□□□□□ -0.34
SMPD4-217ENST00000473720 MRPS17Q9Y2R5 130 aaKnown RBP12.91□□□□□ -0.34
SMPD4-217ENST00000473720 C2CD2Q9Y426 696 aa12.91□□□□□ -0.34
SMPD4-217ENST00000473720 STYXL1Q9Y6J8 313 aa12.91□□□□□ -0.34
SMPD4-217ENST00000473720 DMDP11532 3685 aa12.91□□□□□ -0.34
SMPD4-217ENST00000473720 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.9□□□□□ -0.34
SMPD4-217ENST00000473720 DPYSL4O14531 572 aa12.9□□□□□ -0.34
SMPD4-217ENST00000473720 PPP1R37O75864 691 aa12.9□□□□□ -0.34
SMPD4-217ENST00000473720 MICAL2O94851 1124 aa12.9□□□□□ -0.34
SMPD4-217ENST00000473720 PRPF6O94906 941 aaKnown RBP12.9□□□□□ -0.34
SMPD4-217ENST00000473720 IL18RAPO95256 599 aa12.9□□□□□ -0.34
SMPD4-217ENST00000473720 ITGB3P05106 788 aa12.9□□□□□ -0.34
SMPD4-217ENST00000473720 KRT19P08727 400 aa12.9□□□□□ -0.34
SMPD4-217ENST00000473720 POLR2BP30876 1174 aaKnown RBP12.9□□□□□ -0.34
SMPD4-217ENST00000473720 EPHA5P54756 1037 aa12.9□□□□□ -0.34
SMPD4-217ENST00000473720 WNT7BP56706 349 aa12.9□□□□□ -0.34
SMPD4-217ENST00000473720 CYP4F8P98187 520 aa12.9□□□□□ -0.34
SMPD4-217ENST00000473720 VEPH1Q14D04 833 aa12.9□□□□□ -0.34
SMPD4-217ENST00000473720 SLC39A14Q15043 492 aa12.9□□□□□ -0.34
SMPD4-217ENST00000473720 SV2CQ496J9 727 aa12.9□□□□□ -0.34
SMPD4-217ENST00000473720 GPR158Q5T848 1215 aa12.9□□□□□ -0.34
SMPD4-217ENST00000473720 DNAJB7Q7Z6W7 309 aaPredicted RBP12.9□□□□□ -0.34
SMPD4-217ENST00000473720 MAML2Q8IZL2 1156 aaPredicted RBP12.9□□□□□ -0.34
SMPD4-217ENST00000473720 CSGALNACT1Q8TDX6 532 aa12.9□□□□□ -0.34
SMPD4-217ENST00000473720 FAM3CQ92520 227 aa12.9□□□□□ -0.34
SMPD4-217ENST00000473720 DNASE1L2Q92874 299 aa12.9□□□□□ -0.34
SMPD4-217ENST00000473720 INTS4Q96HW7 963 aaKnown RBP12.9□□□□□ -0.34
SMPD4-217ENST00000473720 ZNF560Q96MR9 790 aa12.9□□□□□ -0.34
SMPD4-217ENST00000473720 LRRC3Q9BY71 257 aa12.9□□□□□ -0.34
SMPD4-217ENST00000473720 BACH2Q9BYV9 841 aa12.9□□□□□ -0.34
SMPD4-217ENST00000473720 ZSCAN16Q9H4T2 348 aaPredicted RBP12.9□□□□□ -0.34
SMPD4-217ENST00000473720 RBAKQ9NYW8 714 aaPredicted RBP12.9□□□□□ -0.34
SMPD4-217ENST00000473720 DSEQ9UL01 958 aa12.9□□□□□ -0.34
SMPD4-217ENST00000473720 AGAP1Q9UPQ3 857 aa12.9□□□□□ -0.34
SMPD4-217ENST00000473720 PCDHB13Q9Y5F0 798 aa12.9□□□□□ -0.34
SMPD4-217ENST00000473720 PIAS3Q9Y6X2 628 aa12.9□□□□□ -0.34
SMPD4-217ENST00000473720 MYOFQ9NZM1 2061 aa12.9□□□□□ -0.34
SMPD4-217ENST00000473720 EML5Q05BV3 1969 aa12.89□□□□□ -0.35
SMPD4-217ENST00000473720 SLC38A8A6NNN8 435 aa12.89□□□□□ -0.35
SMPD4-217ENST00000473720 KPNA7A9QM74 516 aa12.89□□□□□ -0.35
SMPD4-217ENST00000473720 KINO60870 393 aaKnown RBP12.89□□□□□ -0.35
SMPD4-217ENST00000473720 CYP11A1P05108 521 aa12.89□□□□□ -0.35
SMPD4-217ENST00000473720 CCNE1P24864 410 aa12.89□□□□□ -0.35
SMPD4-217ENST00000473720 BFSP1Q12934 665 aa12.89□□□□□ -0.35
SMPD4-217ENST00000473720 ARHGAP15Q53QZ3 475 aa12.89□□□□□ -0.35
SMPD4-217ENST00000473720 LMBRD2Q68DH5 695 aaPredicted RBP12.89□□□□□ -0.35
SMPD4-217ENST00000473720 GAREM2Q75VX8 874 aa12.89□□□□□ -0.35
SMPD4-217ENST00000473720 ITIH5Q86UX2 942 aa12.89□□□□□ -0.35
SMPD4-217ENST00000473720 LRRTM3Q86VH5 581 aa12.89□□□□□ -0.35
SMPD4-217ENST00000473720 ARID3BQ8IVW6 561 aaPredicted RBP12.89□□□□□ -0.35
SMPD4-217ENST00000473720 MFSD6LQ8IWD5 586 aa12.89□□□□□ -0.35
SMPD4-217ENST00000473720 CCDC65Q8IXS2 484 aa12.89□□□□□ -0.35
SMPD4-217ENST00000473720 KIAA2013Q8IYS2 634 aa12.89□□□□□ -0.35
SMPD4-217ENST00000473720 CSGALNACT2Q8N6G5 542 aa12.89□□□□□ -0.35
SMPD4-217ENST00000473720 STKLD1Q8NE28 680 aa12.89□□□□□ -0.35
SMPD4-217ENST00000473720 DEPDC1BQ8WUY9 529 aa12.89□□□□□ -0.35
SMPD4-217ENST00000473720 HPS3Q969F9 1004 aa12.89□□□□□ -0.35
SMPD4-217ENST00000473720 PSMG2Q969U7 264 aa12.89□□□□□ -0.35
SMPD4-217ENST00000473720 RSPRY1Q96DX4 576 aa12.89□□□□□ -0.35
SMPD4-217ENST00000473720 ZFYVE19Q96K21 471 aa12.89□□□□□ -0.35
SMPD4-217ENST00000473720 GCNAQ96QF7 691 aa12.89□□□□□ -0.35
SMPD4-217ENST00000473720 NELL2Q99435 816 aa12.89□□□□□ -0.35
SMPD4-217ENST00000473720 CBWD1Q9BRT8 395 aa12.89□□□□□ -0.35
SMPD4-217ENST00000473720 OSBPL6Q9BZF3 934 aa12.89□□□□□ -0.35
SMPD4-217ENST00000473720 GPR88Q9GZN0 384 aa12.89□□□□□ -0.35
SMPD4-217ENST00000473720 ZCWPW1Q9H0M4 648 aa12.89□□□□□ -0.35
SMPD4-217ENST00000473720 SPAG17Q6Q759 2223 aa12.88□□□□□ -0.35
SMPD4-217ENST00000473720 MAN2B1O00754 1011 aa12.88□□□□□ -0.35
SMPD4-217ENST00000473720 SPTLC2O15270 562 aa12.88□□□□□ -0.35
SMPD4-217ENST00000473720 LDHAP00338 332 aaKnown RBP12.88□□□□□ -0.35
SMPD4-217ENST00000473720 HSP90AA1P07900 732 aaKnown RBP12.88□□□□□ -0.35
SMPD4-217ENST00000473720 ATF6P18850 670 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms