RNA–Protein interactions for RNA: ENST00000473460.1

GINS1-202, Transcript of GINS complex subunit 1, humanhuman

TSL 2

Gene GINS1, Length 541 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS1-202ENST00000473460 RAB39AQ14964 217 aa4.42□□□□□ -1.7
GINS1-202ENST00000473460 C3orf36Q3SXR2 165 aa4.42□□□□□ -1.7
GINS1-202ENST00000473460 SUPT20HL1Q3ZLR7 823 aa4.42□□□□□ -1.7
GINS1-202ENST00000473460 CT47A1Q5JQC4 288 aaPredicted RBP4.42□□□□□ -1.7
GINS1-202ENST00000473460 YTHDF3Q7Z739 585 aaKnown RBP4.42□□□□□ -1.7
GINS1-202ENST00000473460 FAM109AQ8N4B1 249 aa4.42□□□□□ -1.7
GINS1-202ENST00000473460 WASF1Q92558 559 aa4.42□□□□□ -1.7
GINS1-202ENST00000473460 JADE3Q92613 823 aa4.42□□□□□ -1.7
GINS1-202ENST00000473460 QTRT1Q9BXR0 403 aaKnown RBP4.42□□□□□ -1.7
GINS1-202ENST00000473460 TPSD1Q9BZJ3 242 aa4.42□□□□□ -1.7
GINS1-202ENST00000473460 BHMT2Q9H2M3 363 aa4.42□□□□□ -1.7
GINS1-202ENST00000473460 EHD3Q9NZN3 535 aa4.42□□□□□ -1.7
GINS1-202ENST00000473460 PCDHB1Q9Y5F3 818 aa4.42□□□□□ -1.7
GINS1-202ENST00000473460 ZNF521Q96K83 1311 aa4.42□□□□□ -1.7
GINS1-202ENST00000473460 POLRMTO00411 1230 aaKnown RBP4.41□□□□□ -1.7
GINS1-202ENST00000473460 BMP15O95972 392 aa4.41□□□□□ -1.7
GINS1-202ENST00000473460 ANXA1P04083 346 aa4.41□□□□□ -1.7
GINS1-202ENST00000473460 HOXB6P17509 224 aaKnown RBP4.41□□□□□ -1.7
GINS1-202ENST00000473460 INAVAQ3KP66 663 aa4.41□□□□□ -1.7
GINS1-202ENST00000473460 CEP78Q5JTW2 689 aa4.41□□□□□ -1.7
GINS1-202ENST00000473460 RNF219Q5W0B1 726 aaPredicted RBP4.41□□□□□ -1.7
GINS1-202ENST00000473460 CBARPQ8N350 705 aaPredicted RBP4.41□□□□□ -1.7
GINS1-202ENST00000473460 HDAC10Q969S8 669 aa4.41□□□□□ -1.7
GINS1-202ENST00000473460 FKBP10Q96AY3 582 aa4.41□□□□□ -1.7
GINS1-202ENST00000473460 SH2D3AQ9BRG2 576 aa4.41□□□□□ -1.7
GINS1-202ENST00000473460 ACTRT3Q9BYD9 372 aa4.41□□□□□ -1.7
GINS1-202ENST00000473460 SERHLQ9NQF3 203 aa4.41□□□□□ -1.7
GINS1-202ENST00000473460 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.41□□□□□ -1.7
GINS1-202ENST00000473460 PHLDB1Q86UU1 1377 aa4.4□□□□□ -1.7
GINS1-202ENST00000473460 PRSS29PA6NIE9 313 aa4.4□□□□□ -1.71
GINS1-202ENST00000473460 F2RL2O00254 374 aa4.4□□□□□ -1.71
GINS1-202ENST00000473460 TRIAP1O43715 76 aa4.4□□□□□ -1.71
GINS1-202ENST00000473460 NTN1O95631 604 aa4.4□□□□□ -1.71
GINS1-202ENST00000473460 TOP3BO95985 862 aaKnown RBP4.4□□□□□ -1.71
GINS1-202ENST00000473460 CPEP16870 476 aa4.4□□□□□ -1.71
GINS1-202ENST00000473460 CERS1P27544 350 aa4.4□□□□□ -1.71
GINS1-202ENST00000473460 TOB1P50616 345 aaPredicted RBP4.4□□□□□ -1.71
GINS1-202ENST00000473460 BMPR2Q13873 1038 aa4.4□□□□□ -1.71
GINS1-202ENST00000473460 KRTAP5-11Q6L8G4 156 aa4.4□□□□□ -1.71
GINS1-202ENST00000473460 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.4□□□□□ -1.71
GINS1-202ENST00000473460 SLC18B1Q6NT16 456 aa4.4□□□□□ -1.71
GINS1-202ENST00000473460 TAF2Q6P1X5 1199 aa4.4□□□□□ -1.71
GINS1-202ENST00000473460 CEP85Q6P2H3 762 aa4.4□□□□□ -1.71
GINS1-202ENST00000473460 ZNF551Q7Z340 670 aaPredicted RBP4.4□□□□□ -1.71
GINS1-202ENST00000473460 KRT26Q7Z3Y9 468 aa4.4□□□□□ -1.71
GINS1-202ENST00000473460 NOP9Q86U38 636 aaKnown RBP4.4□□□□□ -1.71
GINS1-202ENST00000473460 PDSS2Q86YH6 399 aa4.4□□□□□ -1.71
GINS1-202ENST00000473460 AMOTL1Q8IY63 956 aa4.4□□□□□ -1.71
GINS1-202ENST00000473460 KAT5Q92993 513 aa4.4□□□□□ -1.71
GINS1-202ENST00000473460 SCAMP4Q969E2 229 aa4.4□□□□□ -1.71
GINS1-202ENST00000473460 CLPTM1LQ96KA5 538 aa4.4□□□□□ -1.71
GINS1-202ENST00000473460 NRIP3Q9NQ35 241 aa4.4□□□□□ -1.71
GINS1-202ENST00000473460 CALCOCO1Q9P1Z2 691 aa4.4□□□□□ -1.71
GINS1-202ENST00000473460 SAP30BPQ9UHR5 308 aaKnown RBP4.4□□□□□ -1.71
GINS1-202ENST00000473460 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.4□□□□□ -1.71
GINS1-202ENST00000473460 NT5C1B-RDH14C9J2C7 533 aa4.39□□□□□ -1.71
GINS1-202ENST00000473460 PPP6CO00743 305 aa4.39□□□□□ -1.71
GINS1-202ENST00000473460 JTBO76095 146 aa4.39□□□□□ -1.71
GINS1-202ENST00000473460 VIL1P09327 827 aaKnown RBP4.39□□□□□ -1.71
GINS1-202ENST00000473460 CYP2D6P10635 497 aa4.39□□□□□ -1.71
GINS1-202ENST00000473460 KRTAP10-6P60371 365 aaPredicted RBP4.39□□□□□ -1.71
GINS1-202ENST00000473460 TBCCQ15814 346 aa4.39□□□□□ -1.71
GINS1-202ENST00000473460 CLUL1Q15846 466 aa4.39□□□□□ -1.71
GINS1-202ENST00000473460 CCDC93Q567U6 631 aa4.39□□□□□ -1.71
GINS1-202ENST00000473460 PLAC9Q5JTB6 97 aa4.39□□□□□ -1.71
GINS1-202ENST00000473460 RBM20Q5T481 1227 aaKnown RBP4.39□□□□□ -1.71
GINS1-202ENST00000473460 SLC9A4Q6AI14 798 aa4.39□□□□□ -1.71
GINS1-202ENST00000473460 GADL1Q6ZQY3 521 aa4.39□□□□□ -1.71
GINS1-202ENST00000473460 TECPR1Q7Z6L1 1165 aa4.39□□□□□ -1.71
GINS1-202ENST00000473460 NPM2Q86SE8 214 aaKnown RBP4.39□□□□□ -1.71
GINS1-202ENST00000473460 PSD4Q8NDX1 1056 aa4.39□□□□□ -1.71
GINS1-202ENST00000473460 C1orf162Q8NEQ5 155 aaPredicted RBP4.39□□□□□ -1.71
GINS1-202ENST00000473460 KLHDC4Q8TBB5 520 aa4.39□□□□□ -1.71
GINS1-202ENST00000473460 VRK1Q99986 396 aaPredicted RBP4.39□□□□□ -1.71
GINS1-202ENST00000473460 ARHGEF3Q9NR81 526 aa4.39□□□□□ -1.71
GINS1-202ENST00000473460 SH3BP4Q9P0V3 963 aa4.39□□□□□ -1.71
GINS1-202ENST00000473460 AGAP1Q9UPQ3 857 aa4.39□□□□□ -1.71
GINS1-202ENST00000473460 CCDC154A6NI56 674 aa4.38□□□□□ -1.71
GINS1-202ENST00000473460 H0YIZ8 118 aa4.38□□□□□ -1.71
GINS1-202ENST00000473460 MYO1FO00160 1098 aa4.38□□□□□ -1.71
GINS1-202ENST00000473460 PCDHGA12O60330 932 aa4.38□□□□□ -1.71
GINS1-202ENST00000473460 PDHA1P08559 390 aa4.38□□□□□ -1.71
GINS1-202ENST00000473460 MALP21145 153 aa4.38□□□□□ -1.71
GINS1-202ENST00000473460 IARSP41252 1262 aaKnown RBP4.38□□□□□ -1.71
GINS1-202ENST00000473460 PSMC1P62191 440 aaKnown RBP4.38□□□□□ -1.71
GINS1-202ENST00000473460 SNAPC2Q13487 334 aa4.38□□□□□ -1.71
GINS1-202ENST00000473460 HABP2Q14520 560 aaPredicted RBP4.38□□□□□ -1.71
GINS1-202ENST00000473460 VPS53Q5VIR6 699 aa4.38□□□□□ -1.71
GINS1-202ENST00000473460 PRAMEF17Q5VTA0 474 aa4.38□□□□□ -1.71
GINS1-202ENST00000473460 SLC2A7Q6PXP3 512 aa4.38□□□□□ -1.71
GINS1-202ENST00000473460 CRELD2Q6UXH1 353 aaPredicted RBP4.38□□□□□ -1.71
GINS1-202ENST00000473460 AOPEPQ8N6M6 819 aa4.38□□□□□ -1.71
GINS1-202ENST00000473460 DENND1AQ8TEH3 1009 aa4.38□□□□□ -1.71
GINS1-202ENST00000473460 TBC1D5Q92609 795 aa4.38□□□□□ -1.71
GINS1-202ENST00000473460 FAM136AQ96C01 138 aa4.38□□□□□ -1.71
GINS1-202ENST00000473460 WACQ9BTA9 647 aa4.38□□□□□ -1.71
GINS1-202ENST00000473460 SPRTNQ9H040 489 aaPredicted RBP4.38□□□□□ -1.71
GINS1-202ENST00000473460 SLKQ9H2G2 1235 aaPredicted RBP4.38□□□□□ -1.71
GINS1-202ENST00000473460 PCDHGA9Q9Y5G4 932 aaKnown RBP4.38□□□□□ -1.71
GINS1-202ENST00000473460 PCDHGA8Q9Y5G5 932 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms