RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 TSC2P49815 1807 aa13.72□□□□□ -0.21
TRAF4-209ENST00000473421 DCLK1O15075 740 aa13.72□□□□□ -0.21
TRAF4-209ENST00000473421 TOP3BO95985 862 aaKnown RBP13.72□□□□□ -0.21
TRAF4-209ENST00000473421 NMT1P30419 496 aaKnown RBP13.72□□□□□ -0.21
TRAF4-209ENST00000473421 PDIA5Q14554 519 aa13.72□□□□□ -0.21
TRAF4-209ENST00000473421 ENOX2Q16206 610 aaKnown RBP13.72□□□□□ -0.21
TRAF4-209ENST00000473421 SCARA3Q6AZY7 606 aa13.72□□□□□ -0.21
TRAF4-209ENST00000473421 LRRTM3Q86VH5 581 aa13.72□□□□□ -0.21
TRAF4-209ENST00000473421 BPIFB1Q8TDL5 484 aa13.72□□□□□ -0.21
TRAF4-209ENST00000473421 GIPC2Q8TF65 315 aa13.72□□□□□ -0.21
TRAF4-209ENST00000473421 LRRC15Q8TF66 581 aa13.72□□□□□ -0.21
TRAF4-209ENST00000473421 GAB3Q8WWW8 586 aa13.72□□□□□ -0.21
TRAF4-209ENST00000473421 EZH1Q92800 747 aaPredicted RBP13.72□□□□□ -0.21
TRAF4-209ENST00000473421 E2F7Q96AV8 911 aa13.72□□□□□ -0.21
TRAF4-209ENST00000473421 FAM83CQ9BQN1 747 aa13.72□□□□□ -0.21
TRAF4-209ENST00000473421 DNM3Q9UQ16 869 aa13.72□□□□□ -0.21
TRAF4-209ENST00000473421 RBM19Q9Y4C8 960 aaKnown RBP13.72□□□□□ -0.21
TRAF4-209ENST00000473421 SCN1AP35498 2009 aa13.72□□□□□ -0.21
TRAF4-209ENST00000473421 ASPMQ8IZT6 3477 aa13.72□□□□□ -0.21
TRAF4-209ENST00000473421 MYH11P35749 1972 aa13.71□□□□□ -0.21
TRAF4-209ENST00000473421 OR6C75A6NL08 312 aa13.71□□□□□ -0.21
TRAF4-209ENST00000473421 C1QTNF9BB2RNN3 333 aa13.71□□□□□ -0.21
TRAF4-209ENST00000473421 CLDN3O15551 220 aa13.71□□□□□ -0.21
TRAF4-209ENST00000473421 RPP40O75818 363 aaKnown RBP13.71□□□□□ -0.21
TRAF4-209ENST00000473421 EPN2O95208 641 aa13.71□□□□□ -0.21
TRAF4-209ENST00000473421 SEC24BO95487 1268 aa13.71□□□□□ -0.21
TRAF4-209ENST00000473421 EGFP01133 1207 aa13.71□□□□□ -0.21
TRAF4-209ENST00000473421 C1QTNF9P0C862 333 aa13.71□□□□□ -0.21
TRAF4-209ENST00000473421 ARSAP15289 507 aa13.71□□□□□ -0.21
TRAF4-209ENST00000473421 SPINK2P20155 84 aa13.71□□□□□ -0.21
TRAF4-209ENST00000473421 ALDH1A3P47895 512 aa13.71□□□□□ -0.21
TRAF4-209ENST00000473421 LIMK1P53667 647 aa13.71□□□□□ -0.21
TRAF4-209ENST00000473421 LILRA4P59901 499 aa13.71□□□□□ -0.21
TRAF4-209ENST00000473421 SHC2P98077 582 aa13.71□□□□□ -0.21
TRAF4-209ENST00000473421 SAFBQ15424 915 aaKnown RBP eCLIP13.71□□□□□ -0.21
TRAF4-209ENST00000473421 ZRSR1Q15695 479 aaKnown RBP13.71□□□□□ -0.21
TRAF4-209ENST00000473421 ARHGAP29Q52LW3 1261 aa13.71□□□□□ -0.21
TRAF4-209ENST00000473421 ARSHQ5FYA8 562 aa13.71□□□□□ -0.21
TRAF4-209ENST00000473421 TMEM196Q5HYL7 178 aa13.71□□□□□ -0.21
TRAF4-209ENST00000473421 IL31Q6EBC2 164 aa13.71□□□□□ -0.21
TRAF4-209ENST00000473421 OVOS1Q6IE37 1185 aa13.71□□□□□ -0.21
TRAF4-209ENST00000473421 DSTYKQ6XUX3 929 aa13.71□□□□□ -0.21
TRAF4-209ENST00000473421 FBXO18Q8NFZ0 1043 aa13.71□□□□□ -0.21
TRAF4-209ENST00000473421 MSANTD3Q96H12 275 aa13.71□□□□□ -0.21
TRAF4-209ENST00000473421 SENP8Q96LD8 212 aa13.71□□□□□ -0.21
TRAF4-209ENST00000473421 EBF3Q9H4W6 596 aa13.71□□□□□ -0.21
TRAF4-209ENST00000473421 TASP1Q9H6P5 420 aa13.71□□□□□ -0.21
TRAF4-209ENST00000473421 DPYSL4O14531 572 aa13.7□□□□□ -0.22
TRAF4-209ENST00000473421 KCNK5O95279 499 aa13.7□□□□□ -0.22
TRAF4-209ENST00000473421 CLTAP09496 248 aa13.7□□□□□ -0.22
TRAF4-209ENST00000473421 PLS3P13797 630 aa13.7□□□□□ -0.22
TRAF4-209ENST00000473421 GUCY2CP25092 1073 aa13.7□□□□□ -0.22
TRAF4-209ENST00000473421 GPR15P49685 360 aa13.7□□□□□ -0.22
TRAF4-209ENST00000473421 PLD1Q13393 1074 aa13.7□□□□□ -0.22
TRAF4-209ENST00000473421 ORC2Q13416 577 aaPredicted RBP13.7□□□□□ -0.22
TRAF4-209ENST00000473421 ITPRIPL2Q3MIP1 535 aa13.7□□□□□ -0.22
TRAF4-209ENST00000473421 SLC39A12Q504Y0 691 aa13.7□□□□□ -0.22
TRAF4-209ENST00000473421 JADE1Q6IE81 842 aa13.7□□□□□ -0.22
TRAF4-209ENST00000473421 SLC39A4Q6P5W5 647 aa13.7□□□□□ -0.22
TRAF4-209ENST00000473421 USP37Q86T82 979 aa13.7□□□□□ -0.22
TRAF4-209ENST00000473421 SPIRE2Q8WWL2 714 aa13.7□□□□□ -0.22
TRAF4-209ENST00000473421 USP13Q92995 863 aaPredicted RBP13.7□□□□□ -0.22
TRAF4-209ENST00000473421 DRC1Q96MC2 740 aa13.7□□□□□ -0.22
TRAF4-209ENST00000473421 HHIPQ96QV1 700 aa13.7□□□□□ -0.22
TRAF4-209ENST00000473421 SEPT5Q99719 369 aaPredicted RBP13.7□□□□□ -0.22
TRAF4-209ENST00000473421 LSM14BQ9BX40 385 aaKnown RBP13.7□□□□□ -0.22
TRAF4-209ENST00000473421 IKZF4Q9H2S9 585 aa13.7□□□□□ -0.22
TRAF4-209ENST00000473421 PLEKHA5Q9HAU0 1116 aa13.7□□□□□ -0.22
TRAF4-209ENST00000473421 INVSQ9Y283 1065 aa13.7□□□□□ -0.22
TRAF4-209ENST00000473421 ABCA7Q8IZY2 2146 aa13.7□□□□□ -0.22
TRAF4-209ENST00000473421 DENND4CQ5VZ89 1909 aa13.7□□□□□ -0.22
TRAF4-209ENST00000473421 WDFY3Q8IZQ1 3526 aa13.69□□□□□ -0.22
TRAF4-209ENST00000473421 TISP43B9A030 160 aa13.69□□□□□ -0.22
TRAF4-209ENST00000473421 RNF40O75150 1001 aa13.69□□□□□ -0.22
TRAF4-209ENST00000473421 NFICP08651 508 aa13.69□□□□□ -0.22
TRAF4-209ENST00000473421 TYMPP19971 482 aa13.69□□□□□ -0.22
TRAF4-209ENST00000473421 MPLP40238 635 aa13.69□□□□□ -0.22
TRAF4-209ENST00000473421 SLC12A3P55017 1021 aa13.69□□□□□ -0.22
TRAF4-209ENST00000473421 STRN3Q13033 797 aa13.69□□□□□ -0.22
TRAF4-209ENST00000473421 MYBPC2Q14324 1141 aa13.69□□□□□ -0.22
TRAF4-209ENST00000473421 MGAT5BQ3V5L5 792 aa13.69□□□□□ -0.22
TRAF4-209ENST00000473421 PLK5Q496M5 336 aa13.69□□□□□ -0.22
TRAF4-209ENST00000473421 SDHAF4Q5VUM1 108 aa13.69□□□□□ -0.22
TRAF4-209ENST00000473421 SPATA1Q5VX52 437 aa13.69□□□□□ -0.22
TRAF4-209ENST00000473421 PSAPL1Q6NUJ1 521 aa13.69□□□□□ -0.22
TRAF4-209ENST00000473421 ZPBP2Q6X784 338 aa13.69□□□□□ -0.22
TRAF4-209ENST00000473421 CACNA2D4Q7Z3S7 1137 aa13.69□□□□□ -0.22
TRAF4-209ENST00000473421 C12orf50Q8NA57 414 aaPredicted RBP13.69□□□□□ -0.22
TRAF4-209ENST00000473421 FAM200AQ8TCP9 573 aa13.69□□□□□ -0.22
TRAF4-209ENST00000473421 FAM212AQ96EL1 285 aa13.69□□□□□ -0.22
TRAF4-209ENST00000473421 ZCWPW1Q9H0M4 648 aa13.69□□□□□ -0.22
TRAF4-209ENST00000473421 DUSP15Q9H1R2 295 aaPredicted RBP13.69□□□□□ -0.22
TRAF4-209ENST00000473421 TMLHEQ9NVH6 421 aa13.69□□□□□ -0.22
TRAF4-209ENST00000473421 OBP2AQ9NY56 170 aa13.69□□□□□ -0.22
TRAF4-209ENST00000473421 UBQLN1Q9UMX0 589 aaKnown RBP13.69□□□□□ -0.22
TRAF4-209ENST00000473421 AKAP13Q12802 2813 aa13.68□□□□□ -0.22
TRAF4-209ENST00000473421 OBSL1O75147 1896 aa13.68□□□□□ -0.22
TRAF4-209ENST00000473421 PIRO00625 290 aa13.68□□□□□ -0.22
TRAF4-209ENST00000473421 TRDMT1O14717 391 aaKnown RBP13.68□□□□□ -0.22
TRAF4-209ENST00000473421 ADRB2P07550 413 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms