RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 PDE11AQ9HCR9 933 aa18.01■□□□□ 0.47
USP40-212ENST00000473191 RBAKQ9NYW8 714 aaPredicted RBP18.01■□□□□ 0.47
USP40-212ENST00000473191 MAFFQ9ULX9 164 aa18.01■□□□□ 0.47
USP40-212ENST00000473191 EXOC7Q9UPT5 735 aa18.01■□□□□ 0.47
USP40-212ENST00000473191 PCDHB13Q9Y5F0 798 aa18.01■□□□□ 0.47
USP40-212ENST00000473191 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18■□□□□ 0.47
USP40-212ENST00000473191 KANSL1LA0AUZ9 987 aa18■□□□□ 0.47
USP40-212ENST00000473191 PRR23AA6NEV1 266 aa18■□□□□ 0.47
USP40-212ENST00000473191 KPNA7A9QM74 516 aa18■□□□□ 0.47
USP40-212ENST00000473191 ZNF197O14709 1029 aa18■□□□□ 0.47
USP40-212ENST00000473191 MICAL2O94851 1124 aa18■□□□□ 0.47
USP40-212ENST00000473191 IL18RAPO95256 599 aa18■□□□□ 0.47
USP40-212ENST00000473191 YEATS4O95619 227 aa18■□□□□ 0.47
USP40-212ENST00000473191 ZSCAN22P10073 491 aaPredicted RBP18■□□□□ 0.47
USP40-212ENST00000473191 GARTP22102 1010 aa18■□□□□ 0.47
USP40-212ENST00000473191 UBXN2BQ14CS0 331 aa18■□□□□ 0.47
USP40-212ENST00000473191 TPRG1Q6ZUI0 275 aa18■□□□□ 0.47
USP40-212ENST00000473191 DNAJB7Q7Z6W7 309 aaPredicted RBP18■□□□□ 0.47
USP40-212ENST00000473191 HSCBQ8IWL3 235 aa18■□□□□ 0.47
USP40-212ENST00000473191 ZNF396Q96N95 335 aaPredicted RBP18■□□□□ 0.47
USP40-212ENST00000473191 LRRC3BQ96PB8 259 aa18■□□□□ 0.47
USP40-212ENST00000473191 SEPT5Q99719 369 aaPredicted RBP18■□□□□ 0.47
USP40-212ENST00000473191 BLZF1Q9H2G9 400 aa18■□□□□ 0.47
USP40-212ENST00000473191 TNMDQ9H2S6 317 aa18■□□□□ 0.47
USP40-212ENST00000473191 ZFP14Q9HCL3 533 aa18■□□□□ 0.47
USP40-212ENST00000473191 SIX4Q9UIU6 781 aa18■□□□□ 0.47
USP40-212ENST00000473191 PCDHA7Q9UN72 937 aa18■□□□□ 0.47
USP40-212ENST00000473191 AGAP1Q9UPQ3 857 aa18■□□□□ 0.47
USP40-212ENST00000473191 GTF3C5Q9Y5Q8 519 aaPredicted RBP18■□□□□ 0.47
USP40-212ENST00000473191 MIA3Q5JRA6 1907 aa18■□□□□ 0.47
USP40-212ENST00000473191 EXTL3O43909 919 aa17.99■□□□□ 0.47
USP40-212ENST00000473191 CUTAO60888 179 aa17.99■□□□□ 0.47
USP40-212ENST00000473191 TARSP26639 723 aaKnown RBP17.99■□□□□ 0.47
USP40-212ENST00000473191 GPR15P49685 360 aa17.99■□□□□ 0.47
USP40-212ENST00000473191 POU5F1Q01860 360 aaKnown RBP17.99■□□□□ 0.47
USP40-212ENST00000473191 ARMCX5Q6P1M9 558 aa17.99■□□□□ 0.47
USP40-212ENST00000473191 OSTM1Q86WC4 334 aa17.99■□□□□ 0.47
USP40-212ENST00000473191 CBWD2Q8IUF1 395 aa17.99■□□□□ 0.47
USP40-212ENST00000473191 CCDC65Q8IXS2 484 aa17.99■□□□□ 0.47
USP40-212ENST00000473191 GIPC2Q8TF65 315 aa17.99■□□□□ 0.47
USP40-212ENST00000473191 SMARCD2Q92925 531 aa17.99■□□□□ 0.47
USP40-212ENST00000473191 OXCT2Q9BYC2 517 aaPredicted RBP17.99■□□□□ 0.47
USP40-212ENST00000473191 MTMR12Q9C0I1 747 aa17.99■□□□□ 0.47
USP40-212ENST00000473191 LTB4R2Q9NPC1 389 aa17.99■□□□□ 0.47
USP40-212ENST00000473191 L1RE1Q9UN81 338 aa17.99■□□□□ 0.47
USP40-212ENST00000473191 R4GN57 208 aa17.99■□□□□ 0.47
USP40-212ENST00000473191 TICRRQ7Z2Z1 1910 aa17.99■□□□□ 0.47
USP40-212ENST00000473191 FAM170BA6NMN3 283 aa17.98■□□□□ 0.47
USP40-212ENST00000473191 POLR2DO15514 142 aaKnown RBP17.98■□□□□ 0.47
USP40-212ENST00000473191 TGFB1I1O43294 461 aa17.98■□□□□ 0.47
USP40-212ENST00000473191 ACAT1P24752 427 aaKnown RBP17.98■□□□□ 0.47
USP40-212ENST00000473191 ALDH1A3P47895 512 aa17.98■□□□□ 0.47
USP40-212ENST00000473191 EPHB3P54753 998 aa17.98■□□□□ 0.47
USP40-212ENST00000473191 ASIC1P78348 528 aa17.98■□□□□ 0.47
USP40-212ENST00000473191 PRKCQQ04759 706 aa17.98■□□□□ 0.47
USP40-212ENST00000473191 DNM1Q05193 864 aaKnown RBP17.98■□□□□ 0.47
USP40-212ENST00000473191 FZD5Q13467 585 aa17.98■□□□□ 0.47
USP40-212ENST00000473191 MGAT5BQ3V5L5 792 aa17.98■□□□□ 0.47
USP40-212ENST00000473191 EPM2AIP1Q7L775 607 aaPredicted RBP17.98■□□□□ 0.47
USP40-212ENST00000473191 GRAMD1CQ8IYS0 662 aa17.98■□□□□ 0.47
USP40-212ENST00000473191 GPD1LQ8N335 351 aa17.98■□□□□ 0.47
USP40-212ENST00000473191 PDCL2Q8N4E4 241 aa17.98■□□□□ 0.47
USP40-212ENST00000473191 CSGALNACT2Q8N6G5 542 aa17.98■□□□□ 0.47
USP40-212ENST00000473191 OR5B17Q8NGF7 314 aa17.98■□□□□ 0.47
USP40-212ENST00000473191 PSMG2Q969U7 264 aa17.98■□□□□ 0.47
USP40-212ENST00000473191 CACNA1HO95180 2353 aa17.98■□□□□ 0.47
USP40-212ENST00000473191 HEPACAM2A8MVW5 462 aa17.97■□□□□ 0.47
USP40-212ENST00000473191 GABRR2P28476 465 aa17.97■□□□□ 0.47
USP40-212ENST00000473191 GDI1P31150 447 aa17.97■□□□□ 0.47
USP40-212ENST00000473191 CYP4F8P98187 520 aa17.97■□□□□ 0.47
USP40-212ENST00000473191 PFKPQ01813 784 aa17.97■□□□□ 0.47
USP40-212ENST00000473191 EHHADHQ08426 723 aa17.97■□□□□ 0.47
USP40-212ENST00000473191 ALCAMQ13740 583 aa17.97■□□□□ 0.47
USP40-212ENST00000473191 SV2CQ496J9 727 aa17.97■□□□□ 0.47
USP40-212ENST00000473191 SDHAF4Q5VUM1 108 aa17.97■□□□□ 0.47
USP40-212ENST00000473191 C1orf210Q8IVY1 113 aa17.97■□□□□ 0.47
USP40-212ENST00000473191 SHDQ96IW2 340 aa17.97■□□□□ 0.47
USP40-212ENST00000473191 TRMT61BQ9BVS5 477 aaKnown RBP17.97■□□□□ 0.47
USP40-212ENST00000473191 SLITRK6Q9H5Y7 841 aa17.97■□□□□ 0.47
USP40-212ENST00000473191 TMEM206Q9H813 350 aa17.97■□□□□ 0.47
USP40-212ENST00000473191 BRD9Q9H8M2 597 aa17.97■□□□□ 0.47
USP40-212ENST00000473191 IL21Q9HBE4 155 aa17.97■□□□□ 0.47
USP40-212ENST00000473191 ABI2Q9NYB9 513 aaPredicted RBP17.97■□□□□ 0.47
USP40-212ENST00000473191 PATJQ8NI35 1801 aa17.97■□□□□ 0.47
USP40-212ENST00000473191 PIEZO1Q92508 2521 aa17.97■□□□□ 0.47
USP40-212ENST00000473191 ARNTLO00327 626 aa17.96■□□□□ 0.47
USP40-212ENST00000473191 CLIC2O15247 247 aa17.96■□□□□ 0.47
USP40-212ENST00000473191 LDHAP00338 332 aaKnown RBP17.96■□□□□ 0.47
USP40-212ENST00000473191 KRT19P08727 400 aa17.96■□□□□ 0.47
USP40-212ENST00000473191 SP9P0CG40 484 aa17.96■□□□□ 0.47
USP40-212ENST00000473191 PSMC3P17980 439 aa17.96■□□□□ 0.47
USP40-212ENST00000473191 BFSP1Q12934 665 aa17.96■□□□□ 0.47
USP40-212ENST00000473191 PLD1Q13393 1074 aa17.96■□□□□ 0.47
USP40-212ENST00000473191 CUL4BQ13620 913 aa17.96■□□□□ 0.47
USP40-212ENST00000473191 METTL23Q86XA0 190 aa17.96■□□□□ 0.47
USP40-212ENST00000473191 NT5DC4Q86YG4 428 aa17.96■□□□□ 0.47
USP40-212ENST00000473191 NELFCDQ8IXH7 590 aa17.96■□□□□ 0.47
USP40-212ENST00000473191 ZNF687Q8N1G0 1237 aa17.96■□□□□ 0.47
USP40-212ENST00000473191 RDH13Q8NBN7 331 aa17.96■□□□□ 0.47
USP40-212ENST00000473191 LEMD2Q8NC56 503 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms