RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 ARHGAP15Q53QZ3 475 aa21.35■■□□□ 1.01
COL9A3-210ENST00000472880 FAM173BQ6P4H8 233 aa21.35■■□□□ 1.01
COL9A3-210ENST00000472880 DNAJB7Q7Z6W7 309 aaPredicted RBP21.35■■□□□ 1.01
COL9A3-210ENST00000472880 THEM5Q8N1Q8 247 aa21.35■■□□□ 1.01
COL9A3-210ENST00000472880 CSGALNACT1Q8TDX6 532 aa21.35■■□□□ 1.01
COL9A3-210ENST00000472880 FAM3CQ92520 227 aa21.35■■□□□ 1.01
COL9A3-210ENST00000472880 RUBCNQ92622 972 aa21.35■■□□□ 1.01
COL9A3-210ENST00000472880 BORCS6Q96GS4 357 aa21.35■■□□□ 1.01
COL9A3-210ENST00000472880 ZNF560Q96MR9 790 aa21.35■■□□□ 1.01
COL9A3-210ENST00000472880 ACCSQ96QU6 501 aa21.35■■□□□ 1.01
COL9A3-210ENST00000472880 ZCWPW1Q9H0M4 648 aa21.35■■□□□ 1.01
COL9A3-210ENST00000472880 ATXN3LQ9H3M9 355 aa21.35■■□□□ 1.01
COL9A3-210ENST00000472880 TBC1D7Q9P0N9 293 aa21.35■■□□□ 1.01
COL9A3-210ENST00000472880 TCHHQ07283 1943 aa21.35■■□□□ 1.01
COL9A3-210ENST00000472880 GVINP1Q7Z2Y8 2422 aa21.35■■□□□ 1.01
COL9A3-210ENST00000472880 TULP1O00294 542 aaPredicted RBP21.34■■□□□ 1.01
COL9A3-210ENST00000472880 GCNT3O95395 438 aa21.34■■□□□ 1.01
COL9A3-210ENST00000472880 GABRR2P28476 465 aa21.34■■□□□ 1.01
COL9A3-210ENST00000472880 TUFMP49411 452 aaKnown RBP21.34■■□□□ 1.01
COL9A3-210ENST00000472880 FOXK2Q01167 660 aa21.34■■□□□ 1.01
COL9A3-210ENST00000472880 SV2CQ496J9 727 aa21.34■■□□□ 1.01
COL9A3-210ENST00000472880 STXBP5Q5T5C0 1151 aa21.34■■□□□ 1.01
COL9A3-210ENST00000472880 L1TD1Q5T7N2 865 aaKnown RBP21.34■■□□□ 1.01
COL9A3-210ENST00000472880 CRELD2Q6UXH1 353 aaPredicted RBP21.34■■□□□ 1.01
COL9A3-210ENST00000472880 CCDC73Q6ZRK6 1079 aa21.34■■□□□ 1.01
COL9A3-210ENST00000472880 NT5DC4Q86YG4 428 aa21.34■■□□□ 1.01
COL9A3-210ENST00000472880 EFCAB13Q8IY85 973 aa21.34■■□□□ 1.01
COL9A3-210ENST00000472880 KIAA2013Q8IYS2 634 aa21.34■■□□□ 1.01
COL9A3-210ENST00000472880 ATRIPQ8WXE1 791 aa21.34■■□□□ 1.01
COL9A3-210ENST00000472880 DNAJC19Q96DA6 116 aa21.34■■□□□ 1.01
COL9A3-210ENST00000472880 PRMT8Q9NR22 394 aaPredicted RBP21.34■■□□□ 1.01
COL9A3-210ENST00000472880 SCN1AP35498 2009 aa21.33■■□□□ 1.01
COL9A3-210ENST00000472880 DPYSL4O14531 572 aa21.33■■□□□ 1.01
COL9A3-210ENST00000472880 IDEP14735 1019 aa21.33■■□□□ 1.01
COL9A3-210ENST00000472880 ADSSP30520 456 aa21.33■■□□□ 1.01
COL9A3-210ENST00000472880 STAT6P42226 847 aa21.33■■□□□ 1.01
COL9A3-210ENST00000472880 MTAPQ13126 283 aa21.33■■□□□ 1.01
COL9A3-210ENST00000472880 FZD5Q13467 585 aa21.33■■□□□ 1.01
COL9A3-210ENST00000472880 GPR158Q5T848 1215 aa21.33■■□□□ 1.01
COL9A3-210ENST00000472880 GAREM2Q75VX8 874 aa21.33■■□□□ 1.01
COL9A3-210ENST00000472880 ARID3BQ8IVW6 561 aaPredicted RBP21.33■■□□□ 1.01
COL9A3-210ENST00000472880 C2orf15Q8WU43 125 aaKnown RBP21.33■■□□□ 1.01
COL9A3-210ENST00000472880 RSPRY1Q96DX4 576 aa21.33■■□□□ 1.01
COL9A3-210ENST00000472880 MSANTD3Q96H12 275 aa21.33■■□□□ 1.01
COL9A3-210ENST00000472880 GCNAQ96QF7 691 aa21.33■■□□□ 1.01
COL9A3-210ENST00000472880 LPIN3Q9BQK8 851 aa21.33■■□□□ 1.01
COL9A3-210ENST00000472880 FAM213AQ9BRX8 229 aa21.33■■□□□ 1.01
COL9A3-210ENST00000472880 IER2Q9BTL4 223 aa21.33■■□□□ 1.01
COL9A3-210ENST00000472880 STRA6Q9BX79 667 aa21.33■■□□□ 1.01
COL9A3-210ENST00000472880 CHRDQ9H2X0 955 aa21.33■■□□□ 1.01
COL9A3-210ENST00000472880 OLFML3Q9NRN5 406 aa21.33■■□□□ 1.01
COL9A3-210ENST00000472880 ZSCAN32Q9NX65 697 aa21.33■■□□□ 1.01
COL9A3-210ENST00000472880 NUP210Q8TEM1 1887 aaPredicted RBP21.32■■□□□ 1
COL9A3-210ENST00000472880 KPNA7A9QM74 516 aa21.32■■□□□ 1
COL9A3-210ENST00000472880 ARNTLO00327 626 aa21.32■■□□□ 1
COL9A3-210ENST00000472880 CHADO15335 359 aa21.32■■□□□ 1
COL9A3-210ENST00000472880 PNPLA4P41247 253 aa21.32■■□□□ 1
COL9A3-210ENST00000472880 KCNA1Q09470 495 aa21.32■■□□□ 1
COL9A3-210ENST00000472880 SMARCB1Q12824 385 aa21.32■■□□□ 1
COL9A3-210ENST00000472880 ALCAMQ13740 583 aa21.32■■□□□ 1
COL9A3-210ENST00000472880 TAF12Q16514 161 aa21.32■■□□□ 1
COL9A3-210ENST00000472880 WSCD1Q658N2 575 aa21.32■■□□□ 1
COL9A3-210ENST00000472880 TSSK4Q6SA08 328 aa21.32■■□□□ 1
COL9A3-210ENST00000472880 SYCP3Q8IZU3 236 aa21.32■■□□□ 1
COL9A3-210ENST00000472880 SUMF1Q8NBK3 374 aa21.32■■□□□ 1
COL9A3-210ENST00000472880 SPPL2BQ8TCT7 592 aa21.32■■□□□ 1
COL9A3-210ENST00000472880 SAAL1Q96ER3 474 aa21.32■■□□□ 1
COL9A3-210ENST00000472880 BACH2Q9BYV9 841 aa21.32■■□□□ 1
COL9A3-210ENST00000472880 PCDHB13Q9Y5F0 798 aa21.32■■□□□ 1
COL9A3-210ENST00000472880 ATF6P18850 670 aa21.31■■□□□ 1
COL9A3-210ENST00000472880 CCNE1P24864 410 aa21.31■■□□□ 1
COL9A3-210ENST00000472880 CDC25CP30307 473 aa21.31■■□□□ 1
COL9A3-210ENST00000472880 CDR1P51861 262 aa21.31■■□□□ 1
COL9A3-210ENST00000472880 KPNA1P52294 538 aaPredicted RBP21.31■■□□□ 1
COL9A3-210ENST00000472880 TFAMQ00059 246 aaKnown RBP21.31■■□□□ 1
COL9A3-210ENST00000472880 FCHO2Q0JRZ9 810 aa21.31■■□□□ 1
COL9A3-210ENST00000472880 PPP2R5DQ14738 602 aa21.31■■□□□ 1
COL9A3-210ENST00000472880 C1orf228Q6PIY5 440 aa21.31■■□□□ 1
COL9A3-210ENST00000472880 ERMP1Q7Z2K6 904 aa21.31■■□□□ 1
COL9A3-210ENST00000472880 BRSK2Q8IWQ3 736 aa21.31■■□□□ 1
COL9A3-210ENST00000472880 DCP1BQ8IZD4 617 aaKnown RBP21.31■■□□□ 1
COL9A3-210ENST00000472880 ZNF687Q8N1G0 1237 aa21.31■■□□□ 1
COL9A3-210ENST00000472880 ZBTB44Q8NCP5 570 aa21.31■■□□□ 1
COL9A3-210ENST00000472880 INTS4Q96HW7 963 aaKnown RBP21.31■■□□□ 1
COL9A3-210ENST00000472880 USP28Q96RU2 1077 aa21.31■■□□□ 1
COL9A3-210ENST00000472880 MKNK1Q9BUB5 465 aa21.31■■□□□ 1
COL9A3-210ENST00000472880 ABI2Q9NYB9 513 aaPredicted RBP21.31■■□□□ 1
COL9A3-210ENST00000472880 RBAKQ9NYW8 714 aaPredicted RBP21.31■■□□□ 1
COL9A3-210ENST00000472880 NCDNQ9UBB6 729 aa21.31■■□□□ 1
COL9A3-210ENST00000472880 MORC2Q9Y6X9 1032 aaPredicted RBP21.31■■□□□ 1
COL9A3-210ENST00000472880 SLC38A8A6NNN8 435 aa21.3■■□□□ 1
COL9A3-210ENST00000472880 LDHAP00338 332 aaKnown RBP21.3■■□□□ 1
COL9A3-210ENST00000472880 GARTP22102 1010 aa21.3■■□□□ 1
COL9A3-210ENST00000472880 CASP5P51878 434 aa21.3■■□□□ 1
COL9A3-210ENST00000472880 MLLT6P55198 1093 aaPredicted RBP21.3■■□□□ 1
COL9A3-210ENST00000472880 CYP4F8P98187 520 aa21.3■■□□□ 1
COL9A3-210ENST00000472880 SLC39A14Q15043 492 aa21.3■■□□□ 1
COL9A3-210ENST00000472880 GPIHBP1Q8IV16 184 aa21.3■■□□□ 1
COL9A3-210ENST00000472880 FAM126AQ9BYI3 521 aaPredicted RBP21.3■■□□□ 1
COL9A3-210ENST00000472880 ZSCAN16Q9H4T2 348 aaPredicted RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms