RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 TRIM43Q96BQ3 446 aaPredicted RBP3.03□□□□□ -1.92
XRN1-210ENST00000472697 CEP95Q96GE4 821 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 MSLNLQ96KJ4 702 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 YME1L1Q96TA2 773 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 ITPAQ9BY32 194 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 FAM129AQ9BZQ8 928 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 SLC25A18Q9H1K4 315 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 RNPEPQ9H4A4 650 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 ZMYND8Q9ULU4 1186 aaPredicted RBP3.03□□□□□ -1.92
XRN1-210ENST00000472697 PCDHB4Q9Y5E5 795 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 CD109Q6YHK3 1445 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 hCG_1807616A0A1W2PRN6 198 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 TCRBV7S2A1N4TA0A589 114 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 M0QYT0 321 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 ADAM23O75077 832 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 VPS4BO75351 444 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 PTP4A3O75365 173 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 RASSF9O75901 435 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 URI1O94763 535 aaPredicted RBP3.03□□□□□ -1.92
XRN1-210ENST00000472697 CSF1P09603 554 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 ZGLP1P0C6A0 271 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 VDRP11473 427 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 CHRM3P20309 590 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 PTGS1P23219 599 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 MST1P26927 711 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 ATICP31939 592 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 SREBF1P36956 1147 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 KIR3DL1P43629 444 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 KCNC1P48547 511 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 HK2P52789 917 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 PLCB4Q15147 1175 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 TAF11Q15544 211 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 DNAJC21Q5F1R6 531 aaKnown RBP3.03□□□□□ -1.92
XRN1-210ENST00000472697 FCRL6Q6DN72 434 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 ZNF574Q6ZN55 896 aaPredicted RBP3.03□□□□□ -1.92
XRN1-210ENST00000472697 THAP5Q7Z6K1 395 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 GALNT13Q8IUC8 556 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 PQLC1Q8N2U9 271 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 VGLL2Q8N8G2 317 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 LINS1Q8NG48 757 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 LINC01599Q8WXQ3 324 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 RSPH1Q8WYR4 309 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 NCSTNQ92542 709 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 PRPF18Q99633 342 aaKnown RBP3.03□□□□□ -1.92
XRN1-210ENST00000472697 RGL1Q9NZL6 768 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.03□□□□□ -1.92
XRN1-210ENST00000472697 TRPS1Q9UHF7 1281 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 ATP11BQ9Y2G3 1177 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 DNAJC16Q9Y2G8 782 aa3.03□□□□□ -1.92
XRN1-210ENST00000472697 IQGAP2Q13576 1575 aa3.03□□□□□ -1.93
XRN1-210ENST00000472697 PLA2R1Q13018 1463 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 UHRF1BP1Q6BDS2 1440 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 AKNAQ7Z591 1439 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 GNAT3A8MTJ3 354 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 IRAK2O43187 625 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 MTSS1O43312 755 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 FAM155BO75949 473 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 ACTL6BO94805 426 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 CPA1P15085 419 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 CD72P21854 359 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 HOXC13P31276 330 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 CARSP49589 748 aaKnown RBP3.02□□□□□ -1.93
XRN1-210ENST00000472697 PTTG1IPP53801 180 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 BCAT1P54687 386 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 UBE3AQ05086 875 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 DCTN2Q13561 401 aaKnown RBP3.02□□□□□ -1.93
XRN1-210ENST00000472697 MED22Q15528 200 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 ZIK1Q3SY52 487 aaPredicted RBP3.02□□□□□ -1.93
XRN1-210ENST00000472697 MROH9Q5TGP6 573 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 KANK2Q63ZY3 851 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 BICRALQ6AI39 1079 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 KLHL17Q6TDP4 642 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 MFSD6Q6ZSS7 791 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 NEK10Q6ZWH5 1172 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 RSPH3Q86UC2 560 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 CHCHD4Q8N4Q1 142 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 RNF125Q96EQ8 232 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 ASB2Q96Q27 587 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 SLF1Q9BQI6 1058 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 PRDM13Q9H4Q3 707 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 C7orf69Q9H7B7 122 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 INCENPQ9NQS7 918 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 PLSCR4Q9NRQ2 329 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 PIH1D1Q9NWS0 290 aaKnown RBP3.02□□□□□ -1.93
XRN1-210ENST00000472697 ARHGAP28Q9P2N2 729 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 PADI4Q9UM07 663 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 MRPS17Q9Y2R5 130 aaKnown RBP3.02□□□□□ -1.93
XRN1-210ENST00000472697 PITPNM2Q9BZ72 1349 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 SYNMO15061 1565 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 AGPSO00116 658 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 TGDSO95455 350 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 HSPA4LO95757 839 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 CEACAM5P06731 702 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 ANXA2P07355 339 aaKnown RBP3.02□□□□□ -1.93
XRN1-210ENST00000472697 FAHP16930 419 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 KCNJ5P48544 419 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 ATXN1P54253 815 aaKnown RBP3.02□□□□□ -1.93
XRN1-210ENST00000472697 RAC1P63000 192 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 MTM1Q13496 603 aa3.02□□□□□ -1.93
XRN1-210ENST00000472697 CR1LQ2VPA4 569 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms