RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 PHKA1P46020 1223 aa7.94□□□□□ -1.14
SCAF4-205ENST00000472318 LSAMPQ13449 338 aa7.94□□□□□ -1.14
SCAF4-205ENST00000472318 C21orf62-AS1Q17RA5 79 aa7.94□□□□□ -1.14
SCAF4-205ENST00000472318 TMCO2Q7Z6W1 182 aaPredicted RBP7.94□□□□□ -1.14
SCAF4-205ENST00000472318 DEFB128Q7Z7B8 93 aa7.94□□□□□ -1.14
SCAF4-205ENST00000472318 DZIP1Q86YF9 867 aaKnown RBP7.94□□□□□ -1.14
SCAF4-205ENST00000472318 ABRAQ8N0Z2 381 aa7.94□□□□□ -1.14
SCAF4-205ENST00000472318 C1orf131Q8NDD1 294 aaKnown RBP7.94□□□□□ -1.14
SCAF4-205ENST00000472318 ATL2Q8NHH9 583 aa7.94□□□□□ -1.14
SCAF4-205ENST00000472318 PHOSPHO2Q8TCD6 241 aa7.94□□□□□ -1.14
SCAF4-205ENST00000472318 DDX1Q92499 740 aaKnown RBP7.94□□□□□ -1.14
SCAF4-205ENST00000472318 LPIN2Q92539 896 aa7.94□□□□□ -1.14
SCAF4-205ENST00000472318 RPAP3Q9H6T3 665 aaPredicted RBP7.94□□□□□ -1.14
SCAF4-205ENST00000472318 ZIM2Q9NZV7 527 aa7.94□□□□□ -1.14
SCAF4-205ENST00000472318 PI4KBQ9UBF8 816 aa7.94□□□□□ -1.14
SCAF4-205ENST00000472318 MRPS23Q9Y3D9 190 aaKnown RBP7.94□□□□□ -1.14
SCAF4-205ENST00000472318 PCDHA2Q9Y5H9 948 aa7.94□□□□□ -1.14
SCAF4-205ENST00000472318 GRIN2DO15399 1336 aa7.94□□□□□ -1.14
SCAF4-205ENST00000472318 ZNF236Q9UL36 1845 aa7.94□□□□□ -1.14
SCAF4-205ENST00000472318 SETXQ7Z333 2677 aaKnown RBP7.94□□□□□ -1.14
SCAF4-205ENST00000472318 COL4A4P53420 1690 aaPredicted RBP7.93□□□□□ -1.14
SCAF4-205ENST00000472318 K7ESM1 405 aa7.93□□□□□ -1.14
SCAF4-205ENST00000472318 HGSO14964 777 aaPredicted RBP7.93□□□□□ -1.14
SCAF4-205ENST00000472318 EPB41L2O43491 1005 aaKnown RBP7.93□□□□□ -1.14
SCAF4-205ENST00000472318 GH2P01242 217 aa7.93□□□□□ -1.14
SCAF4-205ENST00000472318 IFIT2P09913 472 aaKnown RBP7.93□□□□□ -1.14
SCAF4-205ENST00000472318 C6orf222P0C671 652 aaPredicted RBP7.93□□□□□ -1.14
SCAF4-205ENST00000472318 GRIA2P42262 883 aa7.93□□□□□ -1.14
SCAF4-205ENST00000472318 PPP2R2AP63151 447 aa7.93□□□□□ -1.14
SCAF4-205ENST00000472318 MECOMQ03112 1051 aa7.93□□□□□ -1.14
SCAF4-205ENST00000472318 MAP4K2Q12851 820 aa7.93□□□□□ -1.14
SCAF4-205ENST00000472318 ICE2Q659A1 982 aa7.93□□□□□ -1.14
SCAF4-205ENST00000472318 TEX19Q8NA77 164 aa7.93□□□□□ -1.14
SCAF4-205ENST00000472318 ABCF2Q9UG63 623 aa7.93□□□□□ -1.14
SCAF4-205ENST00000472318 DENND2AQ9ULE3 1009 aa7.93□□□□□ -1.14
SCAF4-205ENST00000472318 FAM184BQ9ULE4 1060 aa7.93□□□□□ -1.14
SCAF4-205ENST00000472318 ATAD5Q96QE3 1844 aa7.92□□□□□ -1.14
SCAF4-205ENST00000472318 USP24Q9UPU5 2620 aa7.92□□□□□ -1.14
SCAF4-205ENST00000472318 KIF28PB7ZC32 967 aa7.92□□□□□ -1.14
SCAF4-205ENST00000472318 AGRPO00253 132 aa7.92□□□□□ -1.14
SCAF4-205ENST00000472318 AKAP10O43572 662 aa7.92□□□□□ -1.14
SCAF4-205ENST00000472318 B4GALT4O60513 344 aa7.92□□□□□ -1.14
SCAF4-205ENST00000472318 DUSP11O75319 330 aaKnown RBP7.92□□□□□ -1.14
SCAF4-205ENST00000472318 SNAI1O95863 264 aaPredicted RBP7.92□□□□□ -1.14
SCAF4-205ENST00000472318 MYL3P08590 195 aa7.92□□□□□ -1.14
SCAF4-205ENST00000472318 FCER1AP12319 257 aa7.92□□□□□ -1.14
SCAF4-205ENST00000472318 ERVK-21P61565 698 aa7.92□□□□□ -1.14
SCAF4-205ENST00000472318 ZXDAP98168 799 aa7.92□□□□□ -1.14
SCAF4-205ENST00000472318 ADAM9Q13443 819 aa7.92□□□□□ -1.14
SCAF4-205ENST00000472318 STEAP3Q658P3 488 aa7.92□□□□□ -1.14
SCAF4-205ENST00000472318 CCDC70Q6NSX1 233 aa7.92□□□□□ -1.14
SCAF4-205ENST00000472318 SMAP1Q8IYB5 467 aaPredicted RBP7.92□□□□□ -1.14
SCAF4-205ENST00000472318 ANKRD44Q8N8A2 993 aa7.92□□□□□ -1.14
SCAF4-205ENST00000472318 PCSK9Q8NBP7 692 aaKnown RBP7.92□□□□□ -1.14
SCAF4-205ENST00000472318 NINJ1Q92982 152 aa7.92□□□□□ -1.14
SCAF4-205ENST00000472318 PABPC5Q96DU9 382 aaKnown RBP7.92□□□□□ -1.14
SCAF4-205ENST00000472318 BORCS6Q96GS4 357 aa7.92□□□□□ -1.14
SCAF4-205ENST00000472318 NEUROD6Q96NK8 337 aa7.92□□□□□ -1.14
SCAF4-205ENST00000472318 KIAA1683Q9H0B3 1180 aa7.92□□□□□ -1.14
SCAF4-205ENST00000472318 UPF3AQ9H1J1 476 aaKnown RBP7.92□□□□□ -1.14
SCAF4-205ENST00000472318 CDIP1Q9H305 208 aa7.92□□□□□ -1.14
SCAF4-205ENST00000472318 MROH8Q9H579 483 aa7.92□□□□□ -1.14
SCAF4-205ENST00000472318 BICC1Q9H694 974 aaKnown RBP7.92□□□□□ -1.14
SCAF4-205ENST00000472318 C9orf78Q9NZ63 289 aaPredicted RBP7.92□□□□□ -1.14
SCAF4-205ENST00000472318 DTLQ9NZJ0 730 aa7.92□□□□□ -1.14
SCAF4-205ENST00000472318 PCDHB4Q9Y5E5 795 aa7.92□□□□□ -1.14
SCAF4-205ENST00000472318 CLSPNQ9HAW4 1339 aa7.92□□□□□ -1.14
SCAF4-205ENST00000472318 SMCHD1A6NHR9 2005 aa7.91□□□□□ -1.14
SCAF4-205ENST00000472318 A0A1W2PQU0 124 aa7.91□□□□□ -1.14
SCAF4-205ENST00000472318 TCRBV5S2A0A599 114 aa7.91□□□□□ -1.14
SCAF4-205ENST00000472318 TIMM44O43615 452 aa7.91□□□□□ -1.14
SCAF4-205ENST00000472318 TADA3O75528 432 aa7.91□□□□□ -1.14
SCAF4-205ENST00000472318 ITGB3P05106 788 aa7.91□□□□□ -1.14
SCAF4-205ENST00000472318 LDHCP07864 332 aa7.91□□□□□ -1.14
SCAF4-205ENST00000472318 PFKMP08237 780 aa7.91□□□□□ -1.14
SCAF4-205ENST00000472318 NBPF7P0C2Y1 421 aaPredicted RBP7.91□□□□□ -1.14
SCAF4-205ENST00000472318 NEK2P51955 445 aa7.91□□□□□ -1.14
SCAF4-205ENST00000472318 USP14P54578 494 aa7.91□□□□□ -1.14
SCAF4-205ENST00000472318 NKX3-2P78367 333 aa7.91□□□□□ -1.14
SCAF4-205ENST00000472318 BEX3Q00994 111 aa7.91□□□□□ -1.14
SCAF4-205ENST00000472318 PLS1Q14651 629 aa7.91□□□□□ -1.14
SCAF4-205ENST00000472318 COG2Q14746 738 aa7.91□□□□□ -1.14
SCAF4-205ENST00000472318 SMAD2Q15796 467 aaKnown RBP7.91□□□□□ -1.14
SCAF4-205ENST00000472318 CLUL1Q15846 466 aa7.91□□□□□ -1.14
SCAF4-205ENST00000472318 ST3GAL2Q16842 350 aa7.91□□□□□ -1.14
SCAF4-205ENST00000472318 TWISTNBQ3B726 338 aaPredicted RBP7.91□□□□□ -1.14
SCAF4-205ENST00000472318 RABL6Q3YEC7 729 aaPredicted RBP7.91□□□□□ -1.14
SCAF4-205ENST00000472318 CXCL17Q6UXB2 119 aa7.91□□□□□ -1.14
SCAF4-205ENST00000472318 RINLQ6ZS11 566 aa7.91□□□□□ -1.14
SCAF4-205ENST00000472318 EP400NLQ6ZTU2 488 aa7.91□□□□□ -1.14
SCAF4-205ENST00000472318 STK32CQ86UX6 486 aa7.91□□□□□ -1.14
SCAF4-205ENST00000472318 TEX11Q8IYF3 940 aa7.91□□□□□ -1.14
SCAF4-205ENST00000472318 SH3RF3Q8TEJ3 882 aaPredicted RBP7.91□□□□□ -1.14
SCAF4-205ENST00000472318 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.91□□□□□ -1.14
SCAF4-205ENST00000472318 KCTD13Q8WZ19 329 aa7.91□□□□□ -1.14
SCAF4-205ENST00000472318 RBM15Q96T37 977 aaKnown RBP eCLIP7.91□□□□□ -1.14
SCAF4-205ENST00000472318 YIPF4Q9BSR8 244 aa7.91□□□□□ -1.14
SCAF4-205ENST00000472318 EPB41L1Q9H4G0 881 aa7.91□□□□□ -1.14
SCAF4-205ENST00000472318 CLDND1Q9NY35 253 aa7.91□□□□□ -1.14
SCAF4-205ENST00000472318 ZNF69Q9UC07 566 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms