RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 H3BNC9 293 aa18.01■□□□□ 0.47
CCM2-205ENST00000472223 WARSP23381 471 aaKnown RBP18.01■□□□□ 0.47
CCM2-205ENST00000472223 TKTP29401 623 aaKnown RBP18.01■□□□□ 0.47
CCM2-205ENST00000472223 TSPY1Q01534 308 aa18.01■□□□□ 0.47
CCM2-205ENST00000472223 FIGNQ5HY92 759 aa18.01■□□□□ 0.47
CCM2-205ENST00000472223 VARS2Q5ST30 1063 aaKnown RBP18.01■□□□□ 0.47
CCM2-205ENST00000472223 TMC6Q7Z403 805 aa18.01■□□□□ 0.47
CCM2-205ENST00000472223 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.01■□□□□ 0.47
CCM2-205ENST00000472223 UNC93AQ86WB7 457 aa18.01■□□□□ 0.47
CCM2-205ENST00000472223 BCL7CQ8WUZ0 217 aaPredicted RBP18.01■□□□□ 0.47
CCM2-205ENST00000472223 POF1BQ8WVV4 589 aa18.01■□□□□ 0.47
CCM2-205ENST00000472223 RIN2Q8WYP3 895 aaPredicted RBP18.01■□□□□ 0.47
CCM2-205ENST00000472223 ELMO3Q96BJ8 720 aa18.01■□□□□ 0.47
CCM2-205ENST00000472223 TNIP3Q96KP6 325 aa18.01■□□□□ 0.47
CCM2-205ENST00000472223 STK33Q9BYT3 514 aa18.01■□□□□ 0.47
CCM2-205ENST00000472223 NUCKS1Q9H1E3 243 aaKnown RBP18.01■□□□□ 0.47
CCM2-205ENST00000472223 SMYD3Q9H7B4 428 aa18.01■□□□□ 0.47
CCM2-205ENST00000472223 ALG13Q9NP73 1137 aaKnown RBP18.01■□□□□ 0.47
CCM2-205ENST00000472223 NLRC4Q9NPP4 1024 aa18.01■□□□□ 0.47
CCM2-205ENST00000472223 TLR9Q9NR96 1032 aa18.01■□□□□ 0.47
CCM2-205ENST00000472223 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.01■□□□□ 0.47
CCM2-205ENST00000472223 CISHQ9NSE2 258 aa18.01■□□□□ 0.47
CCM2-205ENST00000472223 DDX43Q9NXZ2 648 aaKnown RBP18.01■□□□□ 0.47
CCM2-205ENST00000472223 BARX2Q9UMQ3 279 aaPredicted RBP18.01■□□□□ 0.47
CCM2-205ENST00000472223 TMEM265A0A087WTH1 108 aa18■□□□□ 0.47
CCM2-205ENST00000472223 C2CD2LO14523 706 aa18■□□□□ 0.47
CCM2-205ENST00000472223 CXCL14O95715 111 aa18■□□□□ 0.47
CCM2-205ENST00000472223 LINC00271P0C7V0 271 aa18■□□□□ 0.47
CCM2-205ENST00000472223 STAT1P42224 750 aa18■□□□□ 0.47
CCM2-205ENST00000472223 RAP1GAPP47736 663 aa18■□□□□ 0.47
CCM2-205ENST00000472223 CDH8P55286 799 aa18■□□□□ 0.47
CCM2-205ENST00000472223 BPIFB4P59827 614 aa18■□□□□ 0.47
CCM2-205ENST00000472223 SMC1AQ14683 1233 aaKnown RBP18■□□□□ 0.47
CCM2-205ENST00000472223 PTPROQ16827 1216 aa18■□□□□ 0.47
CCM2-205ENST00000472223 CTXN3Q4LDR2 81 aa18■□□□□ 0.47
CCM2-205ENST00000472223 IQCEQ6IPM2 695 aa18■□□□□ 0.47
CCM2-205ENST00000472223 GJB7Q6PEY0 223 aa18■□□□□ 0.47
CCM2-205ENST00000472223 GPR65Q8IYL9 337 aa18■□□□□ 0.47
CCM2-205ENST00000472223 SPPL3Q8TCT6 385 aa18■□□□□ 0.47
CCM2-205ENST00000472223 CPLX3Q8WVH0 158 aa18■□□□□ 0.47
CCM2-205ENST00000472223 NT5C1AQ9BXI3 368 aa18■□□□□ 0.47
CCM2-205ENST00000472223 EMILIN2Q9BXX0 1053 aa18■□□□□ 0.47
CCM2-205ENST00000472223 LMAN2LQ9H0V9 348 aa18■□□□□ 0.47
CCM2-205ENST00000472223 ZNF576Q9H609 170 aa18■□□□□ 0.47
CCM2-205ENST00000472223 SIX2Q9NPC8 291 aa18■□□□□ 0.47
CCM2-205ENST00000472223 NGRNQ9NPE2 291 aaKnown RBP18■□□□□ 0.47
CCM2-205ENST00000472223 LUC7L2Q9Y383 392 aaKnown RBP18■□□□□ 0.47
CCM2-205ENST00000472223 OR6C75A6NL08 312 aa17.99■□□□□ 0.47
CCM2-205ENST00000472223 AP5Z1O43299 807 aa17.99■□□□□ 0.47
CCM2-205ENST00000472223 OAZ2O95190 189 aa17.99■□□□□ 0.47
CCM2-205ENST00000472223 CTSAP10619 480 aa17.99■□□□□ 0.47
CCM2-205ENST00000472223 IGFBP6P24592 240 aaPredicted RBP17.99■□□□□ 0.47
CCM2-205ENST00000472223 CDC25BP30305 580 aa17.99■□□□□ 0.47
CCM2-205ENST00000472223 PBX1P40424 430 aa17.99■□□□□ 0.47
CCM2-205ENST00000472223 DSG1Q02413 1049 aa17.99■□□□□ 0.47
CCM2-205ENST00000472223 DRAP1Q14919 205 aaPredicted RBP17.99■□□□□ 0.47
CCM2-205ENST00000472223 MAPRE1Q15691 268 aaKnown RBP17.99■□□□□ 0.47
CCM2-205ENST00000472223 PSMD5Q16401 504 aa17.99■□□□□ 0.47
CCM2-205ENST00000472223 PTPN21Q16825 1174 aa17.99■□□□□ 0.47
CCM2-205ENST00000472223 TMEM270Q6UE05 265 aa17.99■□□□□ 0.47
CCM2-205ENST00000472223 DCP1BQ8IZD4 617 aaKnown RBP17.99■□□□□ 0.47
CCM2-205ENST00000472223 TCF25Q9BQ70 676 aa17.99■□□□□ 0.47
CCM2-205ENST00000472223 ACBD6Q9BR61 282 aa17.99■□□□□ 0.47
CCM2-205ENST00000472223 MRPL45Q9BRJ2 306 aaKnown RBP17.99■□□□□ 0.47
CCM2-205ENST00000472223 GANQ9H2C0 597 aa17.99■□□□□ 0.47
CCM2-205ENST00000472223 CHST7Q9NS84 486 aa17.99■□□□□ 0.47
CCM2-205ENST00000472223 CDH9Q9ULB4 789 aa17.99■□□□□ 0.47
CCM2-205ENST00000472223 MYO6Q9UM54 1294 aa17.99■□□□□ 0.47
CCM2-205ENST00000472223 STXBP5LQ9Y2K9 1186 aa17.99■□□□□ 0.47
CCM2-205ENST00000472223 FHOD1Q9Y613 1164 aa17.99■□□□□ 0.47
CCM2-205ENST00000472223 A0A1W2PQJ5 194 aa17.98■□□□□ 0.47
CCM2-205ENST00000472223 ARHGEF15O94989 841 aa17.98■□□□□ 0.47
CCM2-205ENST00000472223 PDGFRBP09619 1106 aa17.98■□□□□ 0.47
CCM2-205ENST00000472223 NDST1P52848 882 aa17.98■□□□□ 0.47
CCM2-205ENST00000472223 APBA1Q02410 837 aa17.98■□□□□ 0.47
CCM2-205ENST00000472223 PTK2Q05397 1052 aa17.98■□□□□ 0.47
CCM2-205ENST00000472223 INCA1Q0VD86 236 aa17.98■□□□□ 0.47
CCM2-205ENST00000472223 RTP2Q5QGT7 225 aa17.98■□□□□ 0.47
CCM2-205ENST00000472223 ZNF697Q5TEC3 545 aa17.98■□□□□ 0.47
CCM2-205ENST00000472223 TAS1R1Q7RTX1 841 aa17.98■□□□□ 0.47
CCM2-205ENST00000472223 RNF168Q8IYW5 571 aaPredicted RBP17.98■□□□□ 0.47
CCM2-205ENST00000472223 PIK3R5Q8WYR1 880 aa17.98■□□□□ 0.47
CCM2-205ENST00000472223 PPP2R3CQ969Q6 453 aa17.98■□□□□ 0.47
CCM2-205ENST00000472223 ARID3AQ99856 593 aa17.98■□□□□ 0.47
CCM2-205ENST00000472223 ZNHIT6Q9NWK9 470 aaKnown RBP17.98■□□□□ 0.47
CCM2-205ENST00000472223 KIAA1257Q9ULG3 409 aa17.98■□□□□ 0.47
CCM2-205ENST00000472223 BACE2Q9Y5Z0 518 aa17.98■□□□□ 0.47
CCM2-205ENST00000472223 GABRDO14764 452 aa17.97■□□□□ 0.47
CCM2-205ENST00000472223 CILPO75339 1184 aa17.97■□□□□ 0.47
CCM2-205ENST00000472223 NOL4O94818 638 aa17.97■□□□□ 0.47
CCM2-205ENST00000472223 ZBED6P86452 979 aa17.97■□□□□ 0.47
CCM2-205ENST00000472223 ZNF394Q53GI3 561 aa17.97■□□□□ 0.47
CCM2-205ENST00000472223 KIAA0319Q5VV43 1072 aa17.97■□□□□ 0.47
CCM2-205ENST00000472223 LIMS2Q7Z4I7 341 aa17.97■□□□□ 0.47
CCM2-205ENST00000472223 KBTBD7Q8WVZ9 684 aa17.97■□□□□ 0.47
CCM2-205ENST00000472223 TMEM176AQ96HP8 235 aa17.97■□□□□ 0.47
CCM2-205ENST00000472223 B3GALT6Q96L58 329 aa17.97■□□□□ 0.47
CCM2-205ENST00000472223 HEXIM2Q96MH2 286 aaKnown RBP17.97■□□□□ 0.47
CCM2-205ENST00000472223 KREMEN1Q96MU8 473 aa17.97■□□□□ 0.47
CCM2-205ENST00000472223 NAA15Q9BXJ9 866 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms