RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 EHBP1Q8NDI1 1231 aa13.21□□□□□ -0.29
PRKCB-205ENST00000472066 MAFAQ8NHW3 353 aaPredicted RBP13.21□□□□□ -0.29
PRKCB-205ENST00000472066 SPATA18Q8TC71 538 aa13.21□□□□□ -0.29
PRKCB-205ENST00000472066 KBTBD7Q8WVZ9 684 aa13.21□□□□□ -0.29
PRKCB-205ENST00000472066 RTP3Q9BQQ7 232 aa13.21□□□□□ -0.29
PRKCB-205ENST00000472066 MRPL45Q9BRJ2 306 aaKnown RBP13.21□□□□□ -0.29
PRKCB-205ENST00000472066 IMPG2Q9BZV3 1241 aa13.21□□□□□ -0.29
PRKCB-205ENST00000472066 TRIP11Q15643 1979 aa13.21□□□□□ -0.29
PRKCB-205ENST00000472066 FSD2A1L4K1 749 aa13.2□□□□□ -0.3
PRKCB-205ENST00000472066 BECN2A8MW95 431 aa13.2□□□□□ -0.3
PRKCB-205ENST00000472066 LINC01565O15544 149 aa13.2□□□□□ -0.3
PRKCB-205ENST00000472066 TGM5O43548 720 aa13.2□□□□□ -0.3
PRKCB-205ENST00000472066 C1RP00736 705 aa13.2□□□□□ -0.3
PRKCB-205ENST00000472066 P4HA1P13674 534 aa13.2□□□□□ -0.3
PRKCB-205ENST00000472066 PRKCSHP14314 528 aaPredicted RBP13.2□□□□□ -0.3
PRKCB-205ENST00000472066 CDK11BP21127 795 aaKnown RBP13.2□□□□□ -0.3
PRKCB-205ENST00000472066 WARSP23381 471 aaKnown RBP13.2□□□□□ -0.3
PRKCB-205ENST00000472066 ASPAP45381 313 aa13.2□□□□□ -0.3
PRKCB-205ENST00000472066 LHX1P48742 406 aa13.2□□□□□ -0.3
PRKCB-205ENST00000472066 CDH8P55286 799 aa13.2□□□□□ -0.3
PRKCB-205ENST00000472066 ARPP19P56211 112 aa13.2□□□□□ -0.3
PRKCB-205ENST00000472066 NOP14P78316 857 aaKnown RBP13.2□□□□□ -0.3
PRKCB-205ENST00000472066 RBM10P98175 930 aaKnown RBP13.2□□□□□ -0.3
PRKCB-205ENST00000472066 COL19A1Q14993 1142 aa13.2□□□□□ -0.3
PRKCB-205ENST00000472066 KRT31Q15323 416 aa13.2□□□□□ -0.3
PRKCB-205ENST00000472066 CTC1Q2NKJ3 1217 aa13.2□□□□□ -0.3
PRKCB-205ENST00000472066 LLGL2Q6P1M3 1020 aa13.2□□□□□ -0.3
PRKCB-205ENST00000472066 LILRA6Q6PI73 481 aa13.2□□□□□ -0.3
PRKCB-205ENST00000472066 OSTM1Q86WC4 334 aa13.2□□□□□ -0.3
PRKCB-205ENST00000472066 VN1R2Q8NFZ6 395 aa13.2□□□□□ -0.3
PRKCB-205ENST00000472066 LMO3Q8TAP4 145 aa13.2□□□□□ -0.3
PRKCB-205ENST00000472066 TATDN2Q93075 761 aa13.2□□□□□ -0.3
PRKCB-205ENST00000472066 PABPC5Q96DU9 382 aaKnown RBP13.2□□□□□ -0.3
PRKCB-205ENST00000472066 FAXDC2Q96IV6 333 aa13.2□□□□□ -0.3
PRKCB-205ENST00000472066 SDCBP2Q9H190 292 aa13.2□□□□□ -0.3
PRKCB-205ENST00000472066 NDST4Q9H3R1 872 aa13.2□□□□□ -0.3
PRKCB-205ENST00000472066 DDX43Q9NXZ2 648 aaKnown RBP13.2□□□□□ -0.3
PRKCB-205ENST00000472066 TAB2Q9NYJ8 693 aa13.2□□□□□ -0.3
PRKCB-205ENST00000472066 LIMA1Q9UHB6 759 aaKnown RBP13.2□□□□□ -0.3
PRKCB-205ENST00000472066 HCFC2Q9Y5Z7 792 aa13.2□□□□□ -0.3
PRKCB-205ENST00000472066 EYSQ5T1H1 3165 aa13.19□□□□□ -0.3
PRKCB-205ENST00000472066 LRRC10BA6NIK2 292 aa13.19□□□□□ -0.3
PRKCB-205ENST00000472066 GLUD1P00367 558 aa13.19□□□□□ -0.3
PRKCB-205ENST00000472066 WEE2P0C1S8 567 aa13.19□□□□□ -0.3
PRKCB-205ENST00000472066 SPATA31D3P0C874 917 aa13.19□□□□□ -0.3
PRKCB-205ENST00000472066 EPCAMP16422 314 aa13.19□□□□□ -0.3
PRKCB-205ENST00000472066 LMO2P25791 158 aa13.19□□□□□ -0.3
PRKCB-205ENST00000472066 GNL1P36915 607 aaPredicted RBP13.19□□□□□ -0.3
PRKCB-205ENST00000472066 ZNF445P59923 1031 aa13.19□□□□□ -0.3
PRKCB-205ENST00000472066 ROR1Q01973 937 aa13.19□□□□□ -0.3
PRKCB-205ENST00000472066 SKIV2LQ15477 1246 aaKnown RBP13.19□□□□□ -0.3
PRKCB-205ENST00000472066 TMEM184AQ6ZMB5 413 aa13.19□□□□□ -0.3
PRKCB-205ENST00000472066 SCARA5Q6ZMJ2 495 aa13.19□□□□□ -0.3
PRKCB-205ENST00000472066 SPATA31D4Q6ZUB0 917 aa13.19□□□□□ -0.3
PRKCB-205ENST00000472066 LUZP1Q86V48 1076 aa13.19□□□□□ -0.3
PRKCB-205ENST00000472066 OR10T2Q8NGX3 314 aa13.19□□□□□ -0.3
PRKCB-205ENST00000472066 ZNF461Q8TAF7 563 aa13.19□□□□□ -0.3
PRKCB-205ENST00000472066 TMEM209Q96SK2 561 aa13.19□□□□□ -0.3
PRKCB-205ENST00000472066 ACBD6Q9BR61 282 aa13.19□□□□□ -0.3
PRKCB-205ENST00000472066 BCO2Q9BYV7 579 aa13.19□□□□□ -0.3
PRKCB-205ENST00000472066 NIF3L1Q9GZT8 377 aa13.19□□□□□ -0.3
PRKCB-205ENST00000472066 INTS2Q9H0H0 1204 aaKnown RBP13.19□□□□□ -0.3
PRKCB-205ENST00000472066 ZCWPW1Q9H0M4 648 aa13.19□□□□□ -0.3
PRKCB-205ENST00000472066 VPS16Q9H269 839 aa13.19□□□□□ -0.3
PRKCB-205ENST00000472066 SNX25Q9H3E2 840 aa13.19□□□□□ -0.3
PRKCB-205ENST00000472066 TSPY26PQ9H489 355 aa13.19□□□□□ -0.3
PRKCB-205ENST00000472066 SMYD3Q9H7B4 428 aa13.19□□□□□ -0.3
PRKCB-205ENST00000472066 CYP3A43Q9HB55 503 aa13.19□□□□□ -0.3
PRKCB-205ENST00000472066 CLDND1Q9NY35 253 aa13.19□□□□□ -0.3
PRKCB-205ENST00000472066 REV3LO60673 3130 aa13.19□□□□□ -0.3
PRKCB-205ENST00000472066 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.18□□□□□ -0.3
PRKCB-205ENST00000472066 WDR27A2RRH5 827 aa13.18□□□□□ -0.3
PRKCB-205ENST00000472066 GTPBP10A4D1E9 387 aaKnown RBP13.18□□□□□ -0.3
PRKCB-205ENST00000472066 HCRTO43612 131 aa13.18□□□□□ -0.3
PRKCB-205ENST00000472066 ABLIM3O94929 683 aa13.18□□□□□ -0.3
PRKCB-205ENST00000472066 SLC34A2O95436 690 aa13.18□□□□□ -0.3
PRKCB-205ENST00000472066 GLP2RO95838 553 aa13.18□□□□□ -0.3
PRKCB-205ENST00000472066 TPM2P07951 284 aa13.18□□□□□ -0.3
PRKCB-205ENST00000472066 PDGFRBP09619 1106 aa13.18□□□□□ -0.3
PRKCB-205ENST00000472066 OR4Q2P0C623 313 aa13.18□□□□□ -0.3
PRKCB-205ENST00000472066 ATP1A3P13637 1013 aa13.18□□□□□ -0.3
PRKCB-205ENST00000472066 CPB1P15086 417 aa13.18□□□□□ -0.3
PRKCB-205ENST00000472066 RAP1GAPP47736 663 aa13.18□□□□□ -0.3
PRKCB-205ENST00000472066 LRMPQ12912 555 aa13.18□□□□□ -0.3
PRKCB-205ENST00000472066 GPR17Q13304 367 aa13.18□□□□□ -0.3
PRKCB-205ENST00000472066 TPGS2Q68CL5 300 aa13.18□□□□□ -0.3
PRKCB-205ENST00000472066 RNF19BQ6ZMZ0 732 aa13.18□□□□□ -0.3
PRKCB-205ENST00000472066 GBP6Q6ZN66 633 aa13.18□□□□□ -0.3
PRKCB-205ENST00000472066 EP400NLQ6ZTU2 488 aa13.18□□□□□ -0.3
PRKCB-205ENST00000472066 ANKRD20A12PQ8NF67 263 aa13.18□□□□□ -0.3
PRKCB-205ENST00000472066 OR6B3Q8NGW1 331 aa13.18□□□□□ -0.3
PRKCB-205ENST00000472066 FAM200AQ8TCP9 573 aa13.18□□□□□ -0.3
PRKCB-205ENST00000472066 CASP10Q92851 521 aa13.18□□□□□ -0.3
PRKCB-205ENST00000472066 NT5C1BQ96P26 610 aa13.18□□□□□ -0.3
PRKCB-205ENST00000472066 CRACR2AQ9BSW2 395 aa13.18□□□□□ -0.3
PRKCB-205ENST00000472066 CLEC1BQ9P126 229 aa13.18□□□□□ -0.3
PRKCB-205ENST00000472066 A8MXQ7 604 aa13.17□□□□□ -0.3
PRKCB-205ENST00000472066 PES1O00541 588 aaKnown RBP13.17□□□□□ -0.3
PRKCB-205ENST00000472066 ATF2P15336 505 aa13.17□□□□□ -0.3
PRKCB-205ENST00000472066 SLC9A1P19634 815 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms