RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 HLA-DRAP01903 254 aa19.02■□□□□ 0.64
VPS72-204ENST00000471423 C8AP07357 584 aa19.02■□□□□ 0.64
VPS72-204ENST00000471423 WEE2P0C1S8 567 aa19.02■□□□□ 0.64
VPS72-204ENST00000471423 ATICP31939 592 aa19.02■□□□□ 0.64
VPS72-204ENST00000471423 MXI1P50539 228 aa19.02■□□□□ 0.64
VPS72-204ENST00000471423 TNNC1P63316 161 aa19.02■□□□□ 0.64
VPS72-204ENST00000471423 ITIH3Q06033 890 aa19.02■□□□□ 0.64
VPS72-204ENST00000471423 SMAD2Q15796 467 aaKnown RBP19.02■□□□□ 0.64
VPS72-204ENST00000471423 WDR72Q3MJ13 1102 aa19.02■□□□□ 0.64
VPS72-204ENST00000471423 TPGS2Q68CL5 300 aa19.02■□□□□ 0.64
VPS72-204ENST00000471423 CES5AQ6NT32 575 aa19.02■□□□□ 0.64
VPS72-204ENST00000471423 RNF19BQ6ZMZ0 732 aa19.02■□□□□ 0.64
VPS72-204ENST00000471423 OSTM1Q86WC4 334 aa19.02■□□□□ 0.64
VPS72-204ENST00000471423 THEM5Q8N1Q8 247 aa19.02■□□□□ 0.64
VPS72-204ENST00000471423 TMEM86AQ8N2M4 240 aa19.02■□□□□ 0.64
VPS72-204ENST00000471423 SLC7A14Q8TBB6 771 aa19.02■□□□□ 0.64
VPS72-204ENST00000471423 TAS1R2Q8TE23 839 aa19.02■□□□□ 0.64
VPS72-204ENST00000471423 SUSD6Q92537 303 aa19.02■□□□□ 0.64
VPS72-204ENST00000471423 MMS19Q96T76 1030 aa19.02■□□□□ 0.64
VPS72-204ENST00000471423 SRRTQ9BXP5 876 aaKnown RBP19.02■□□□□ 0.64
VPS72-204ENST00000471423 TMEM8AQ9HCN3 771 aa19.02■□□□□ 0.64
VPS72-204ENST00000471423 NXF1Q9UBU9 619 aaKnown RBP19.02■□□□□ 0.64
VPS72-204ENST00000471423 DACH1Q9UI36 760 aa19.02■□□□□ 0.64
VPS72-204ENST00000471423 FAM50BQ9Y247 325 aa19.02■□□□□ 0.64
VPS72-204ENST00000471423 C5orf42Q9H799 3197 aa19.01■□□□□ 0.63
VPS72-204ENST00000471423 CCDC195A0A1B0GUA6 201 aa19.01■□□□□ 0.63
VPS72-204ENST00000471423 STX10O60499 249 aa19.01■□□□□ 0.63
VPS72-204ENST00000471423 ZMYND10O75800 440 aa19.01■□□□□ 0.63
VPS72-204ENST00000471423 ATF2P15336 505 aa19.01■□□□□ 0.63
VPS72-204ENST00000471423 GTF2H1P32780 548 aa19.01■□□□□ 0.63
VPS72-204ENST00000471423 KRT39Q6A163 491 aa19.01■□□□□ 0.63
VPS72-204ENST00000471423 LIMS2Q7Z4I7 341 aa19.01■□□□□ 0.63
VPS72-204ENST00000471423 FRMD5Q7Z6J6 570 aa19.01■□□□□ 0.63
VPS72-204ENST00000471423 KBTBD7Q8WVZ9 684 aa19.01■□□□□ 0.63
VPS72-204ENST00000471423 SLC35C1Q96A29 364 aa19.01■□□□□ 0.63
VPS72-204ENST00000471423 PGLYRP2Q96PD5 576 aa19.01■□□□□ 0.63
VPS72-204ENST00000471423 ZCWPW1Q9H0M4 648 aa19.01■□□□□ 0.63
VPS72-204ENST00000471423 VRTNQ9H8Y1 702 aa19.01■□□□□ 0.63
VPS72-204ENST00000471423 METTL14Q9HCE5 456 aaKnown RBP19.01■□□□□ 0.63
VPS72-204ENST00000471423 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.01■□□□□ 0.63
VPS72-204ENST00000471423 DDX43Q9NXZ2 648 aaKnown RBP19.01■□□□□ 0.63
VPS72-204ENST00000471423 AFF4Q9UHB7 1163 aaKnown RBP19.01■□□□□ 0.63
VPS72-204ENST00000471423 POLIQ9UNA4 740 aa19.01■□□□□ 0.63
VPS72-204ENST00000471423 HCRTO43612 131 aa19■□□□□ 0.63
VPS72-204ENST00000471423 ACAT1P24752 427 aaKnown RBP19■□□□□ 0.63
VPS72-204ENST00000471423 ELF1P32519 619 aa19■□□□□ 0.63
VPS72-204ENST00000471423 ADCY1Q08828 1119 aa19■□□□□ 0.63
VPS72-204ENST00000471423 GPR17Q13304 367 aa19■□□□□ 0.63
VPS72-204ENST00000471423 CBX2Q14781 532 aaPredicted RBP19■□□□□ 0.63
VPS72-204ENST00000471423 SGSM1Q2NKQ1 1148 aa19■□□□□ 0.63
VPS72-204ENST00000471423 SLC39A12Q504Y0 691 aa19■□□□□ 0.63
VPS72-204ENST00000471423 ZNF667Q5HYK9 610 aa19■□□□□ 0.63
VPS72-204ENST00000471423 PPM1LQ5SGD2 360 aa19■□□□□ 0.63
VPS72-204ENST00000471423 SPOPLQ6IQ16 392 aa19■□□□□ 0.63
VPS72-204ENST00000471423 CAVIN1Q6NZI2 390 aaKnown RBP19■□□□□ 0.63
VPS72-204ENST00000471423 SCARA5Q6ZMJ2 495 aa19■□□□□ 0.63
VPS72-204ENST00000471423 CCDC149Q6ZUS6 474 aa19■□□□□ 0.63
VPS72-204ENST00000471423 DPH6Q7L8W6 267 aa19■□□□□ 0.63
VPS72-204ENST00000471423 GPR149Q86SP6 731 aa19■□□□□ 0.63
VPS72-204ENST00000471423 CMASQ8NFW8 434 aaPredicted RBP19■□□□□ 0.63
VPS72-204ENST00000471423 SPATA18Q8TC71 538 aa19■□□□□ 0.63
VPS72-204ENST00000471423 ZNF707Q96C28 371 aaPredicted RBP19■□□□□ 0.63
VPS72-204ENST00000471423 PI4K2AQ9BTU6 479 aa19■□□□□ 0.63
VPS72-204ENST00000471423 CYP4F11Q9HBI6 524 aa19■□□□□ 0.63
VPS72-204ENST00000471423 ZDHHC7Q9NXF8 308 aa19■□□□□ 0.63
VPS72-204ENST00000471423 TCF20Q9UGU0 1960 aaKnown RBP19■□□□□ 0.63
VPS72-204ENST00000471423 C2orf16Q68DN1 1984 aa18.99■□□□□ 0.63
VPS72-204ENST00000471423 MTMR11A4FU01 709 aa18.99■□□□□ 0.63
VPS72-204ENST00000471423 PRRG1O14668 218 aa18.99■□□□□ 0.63
VPS72-204ENST00000471423 GABRDO14764 452 aa18.99■□□□□ 0.63
VPS72-204ENST00000471423 SEC24AO95486 1093 aa18.99■□□□□ 0.63
VPS72-204ENST00000471423 VNN2O95498 520 aa18.99■□□□□ 0.63
VPS72-204ENST00000471423 GNA14O95837 355 aa18.99■□□□□ 0.63
VPS72-204ENST00000471423 ASS1P00966 412 aaKnown RBP18.99■□□□□ 0.63
VPS72-204ENST00000471423 LHX1P48742 406 aa18.99■□□□□ 0.63
VPS72-204ENST00000471423 CDR1P51861 262 aa18.99■□□□□ 0.63
VPS72-204ENST00000471423 MYL7Q01449 175 aa18.99■□□□□ 0.63
VPS72-204ENST00000471423 UVSSAQ2YD98 709 aa18.99■□□□□ 0.63
VPS72-204ENST00000471423 CBWD6Q4V339 395 aa18.99■□□□□ 0.63
VPS72-204ENST00000471423 CBWD3Q5JTY5 395 aa18.99■□□□□ 0.63
VPS72-204ENST00000471423 CBWD5Q5RIA9 395 aa18.99■□□□□ 0.63
VPS72-204ENST00000471423 SASS6Q6UVJ0 657 aa18.99■□□□□ 0.63
VPS72-204ENST00000471423 SMG7Q92540 1137 aaKnown RBP18.99■□□□□ 0.63
VPS72-204ENST00000471423 TAF4BQ92750 862 aa18.99■□□□□ 0.63
VPS72-204ENST00000471423 RIPOR3Q96MK2 946 aa18.99■□□□□ 0.63
VPS72-204ENST00000471423 MRPL45Q9BRJ2 306 aaKnown RBP18.99■□□□□ 0.63
VPS72-204ENST00000471423 IMPG2Q9BZV3 1241 aa18.99■□□□□ 0.63
VPS72-204ENST00000471423 SMYD3Q9H7B4 428 aa18.99■□□□□ 0.63
VPS72-204ENST00000471423 A0A0C4DFX4 3053 aa18.98■□□□□ 0.63
VPS72-204ENST00000471423 CCL16O15467 120 aa18.98■□□□□ 0.63
VPS72-204ENST00000471423 TACC1O75410 805 aa18.98■□□□□ 0.63
VPS72-204ENST00000471423 FGFR1OPO95684 399 aaKnown RBP18.98■□□□□ 0.63
VPS72-204ENST00000471423 HNRNPA1P09651 372 aaKnown RBP eCLIP18.98■□□□□ 0.63
VPS72-204ENST00000471423 WARSP23381 471 aaKnown RBP18.98■□□□□ 0.63
VPS72-204ENST00000471423 ERCC5P28715 1186 aaPredicted RBP18.98■□□□□ 0.63
VPS72-204ENST00000471423 HOXA9P31269 272 aa18.98■□□□□ 0.63
VPS72-204ENST00000471423 MTHFRP42898 656 aa18.98■□□□□ 0.63
VPS72-204ENST00000471423 RAP1GAPP47736 663 aa18.98■□□□□ 0.63
VPS72-204ENST00000471423 MARSP56192 900 aaKnown RBP18.98■□□□□ 0.63
VPS72-204ENST00000471423 NOP14P78316 857 aaKnown RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms