RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 IPCEF1Q8WWN9 437 aaPredicted RBP7.74□□□□□ -1.17
SMC5-202ENST00000471372 RAPGEF4Q8WZA2 1011 aa7.74□□□□□ -1.17
SMC5-202ENST00000471372 LPPQ93052 612 aa7.74□□□□□ -1.17
SMC5-202ENST00000471372 SPSB4Q96A44 273 aa7.74□□□□□ -1.17
SMC5-202ENST00000471372 PRPF18Q99633 342 aaKnown RBP7.74□□□□□ -1.17
SMC5-202ENST00000471372 SGPP1Q9BX95 441 aa7.74□□□□□ -1.17
SMC5-202ENST00000471372 MS4A7Q9GZW8 240 aaPredicted RBP7.74□□□□□ -1.17
SMC5-202ENST00000471372 ENKD1Q9H0I2 346 aa7.74□□□□□ -1.17
SMC5-202ENST00000471372 KCNK12Q9HB15 430 aa7.74□□□□□ -1.17
SMC5-202ENST00000471372 GOLGA2P5Q9HBQ8 144 aa7.74□□□□□ -1.17
SMC5-202ENST00000471372 GPR35Q9HC97 309 aa7.74□□□□□ -1.17
SMC5-202ENST00000471372 TMEM8AQ9HCN3 771 aa7.74□□□□□ -1.17
SMC5-202ENST00000471372 RLIMQ9NVW2 624 aa7.74□□□□□ -1.17
SMC5-202ENST00000471372 FBXO2Q9UK22 296 aaPredicted RBP7.74□□□□□ -1.17
SMC5-202ENST00000471372 TMX2Q9Y320 296 aa7.74□□□□□ -1.17
SMC5-202ENST00000471372 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.73□□□□□ -1.17
SMC5-202ENST00000471372 RAB27BO00194 218 aa7.73□□□□□ -1.17
SMC5-202ENST00000471372 HSP90AA1P07900 732 aaKnown RBP7.73□□□□□ -1.17
SMC5-202ENST00000471372 GYS1P13807 737 aa7.73□□□□□ -1.17
SMC5-202ENST00000471372 GZMKP49863 264 aa7.73□□□□□ -1.17
SMC5-202ENST00000471372 COPAP53621 1224 aa7.73□□□□□ -1.17
SMC5-202ENST00000471372 EIF5P55010 431 aaKnown RBP7.73□□□□□ -1.17
SMC5-202ENST00000471372 PTH1RQ03431 593 aa7.73□□□□□ -1.17
SMC5-202ENST00000471372 KCTD2Q14681 263 aa7.73□□□□□ -1.17
SMC5-202ENST00000471372 TBR1Q16650 682 aa7.73□□□□□ -1.17
SMC5-202ENST00000471372 RAP1GAP2Q684P5 730 aa7.73□□□□□ -1.17
SMC5-202ENST00000471372 CRTC1Q6UUV9 634 aa7.73□□□□□ -1.17
SMC5-202ENST00000471372 KIAA0408Q6ZU52 694 aa7.73□□□□□ -1.17
SMC5-202ENST00000471372 Q6ZUG5 572 aa7.73□□□□□ -1.17
SMC5-202ENST00000471372 KRT28Q7Z3Y7 464 aa7.73□□□□□ -1.17
SMC5-202ENST00000471372 USP37Q86T82 979 aa7.73□□□□□ -1.17
SMC5-202ENST00000471372 TBC1D1Q86TI0 1168 aaPredicted RBP7.73□□□□□ -1.17
SMC5-202ENST00000471372 HEATR4Q86WZ0 1026 aa7.73□□□□□ -1.17
SMC5-202ENST00000471372 CPOQ8IVL8 374 aa7.73□□□□□ -1.17
SMC5-202ENST00000471372 COLGALT2Q8IYK4 626 aa7.73□□□□□ -1.17
SMC5-202ENST00000471372 EID2BQ96D98 161 aa7.73□□□□□ -1.17
SMC5-202ENST00000471372 CARD11Q9BXL7 1154 aa7.73□□□□□ -1.17
SMC5-202ENST00000471372 TINAGL1Q9GZM7 467 aaPredicted RBP7.73□□□□□ -1.17
SMC5-202ENST00000471372 MCOLN1Q9GZU1 580 aa7.73□□□□□ -1.17
SMC5-202ENST00000471372 SLC6A15Q9H2J7 730 aa7.73□□□□□ -1.17
SMC5-202ENST00000471372 DHX36Q9H2U1 1008 aaKnown RBP7.73□□□□□ -1.17
SMC5-202ENST00000471372 L2HGDHQ9H9P8 463 aa7.73□□□□□ -1.17
SMC5-202ENST00000471372 RIC8AQ9NPQ8 531 aa7.73□□□□□ -1.17
SMC5-202ENST00000471372 BCCIPQ9P287 314 aaKnown RBP eCLIP7.73□□□□□ -1.17
SMC5-202ENST00000471372 KIF17Q9P2E2 1029 aa7.73□□□□□ -1.17
SMC5-202ENST00000471372 PNPLA7Q6ZV29 1317 aa7.73□□□□□ -1.17
SMC5-202ENST00000471372 MYO1CO00159 1063 aa7.72□□□□□ -1.17
SMC5-202ENST00000471372 KCNQ3O43525 872 aa7.72□□□□□ -1.17
SMC5-202ENST00000471372 IFIT1P09914 478 aaKnown RBP7.72□□□□□ -1.17
SMC5-202ENST00000471372 PIM1P11309 404 aaPredicted RBP7.72□□□□□ -1.17
SMC5-202ENST00000471372 CAPN3P20807 821 aa7.72□□□□□ -1.17
SMC5-202ENST00000471372 TUBP50607 506 aa7.72□□□□□ -1.17
SMC5-202ENST00000471372 PNLIPRP1P54315 467 aa7.72□□□□□ -1.17
SMC5-202ENST00000471372 GAGE13Q4V321 117 aa7.72□□□□□ -1.17
SMC5-202ENST00000471372 TMTC4Q5T4D3 741 aa7.72□□□□□ -1.17
SMC5-202ENST00000471372 UTP14CQ5TAP6 766 aaKnown RBP7.72□□□□□ -1.17
SMC5-202ENST00000471372 FAAH2Q6GMR7 532 aa7.72□□□□□ -1.17
SMC5-202ENST00000471372 KRTAP19-1Q8IUB9 90 aa7.72□□□□□ -1.17
SMC5-202ENST00000471372 REXO1L1PQ8IX06 675 aa7.72□□□□□ -1.17
SMC5-202ENST00000471372 CMTM4Q8IZR5 234 aa7.72□□□□□ -1.17
SMC5-202ENST00000471372 SPPL3Q8TCT6 385 aa7.72□□□□□ -1.17
SMC5-202ENST00000471372 GPHA2Q96T91 129 aa7.72□□□□□ -1.17
SMC5-202ENST00000471372 SPATA25Q9BR10 227 aa7.72□□□□□ -1.17
SMC5-202ENST00000471372 PYM1Q9BRP8 204 aaKnown RBP7.72□□□□□ -1.17
SMC5-202ENST00000471372 OSBPL5Q9H0X9 879 aaPredicted RBP7.72□□□□□ -1.17
SMC5-202ENST00000471372 PCDHAC1Q9H158 963 aa7.72□□□□□ -1.17
SMC5-202ENST00000471372 GSTO2Q9H4Y5 243 aa7.72□□□□□ -1.17
SMC5-202ENST00000471372 UBN1Q9NPG3 1134 aa7.72□□□□□ -1.17
SMC5-202ENST00000471372 HEYLQ9NQ87 328 aaPredicted RBP7.72□□□□□ -1.17
SMC5-202ENST00000471372 WASH6PQ9NQA3 447 aa7.72□□□□□ -1.17
SMC5-202ENST00000471372 MRPS18AQ9NVS2 196 aaKnown RBP7.72□□□□□ -1.17
SMC5-202ENST00000471372 FBXO34Q9NWN3 711 aa7.72□□□□□ -1.17
SMC5-202ENST00000471372 XPR1Q9UBH6 696 aa7.72□□□□□ -1.17
SMC5-202ENST00000471372 RGS17Q9UGC6 210 aaPredicted RBP7.72□□□□□ -1.17
SMC5-202ENST00000471372 FEM1BQ9UK73 627 aa7.72□□□□□ -1.17
SMC5-202ENST00000471372 ZMYND8Q9ULU4 1186 aaPredicted RBP7.72□□□□□ -1.17
SMC5-202ENST00000471372 FCHO1O14526 889 aa7.71□□□□□ -1.18
SMC5-202ENST00000471372 PEX10O60683 326 aa7.71□□□□□ -1.18
SMC5-202ENST00000471372 HAUS5O94927 633 aa7.71□□□□□ -1.18
SMC5-202ENST00000471372 CKBP12277 381 aa7.71□□□□□ -1.18
SMC5-202ENST00000471372 EGR1P18146 543 aa7.71□□□□□ -1.18
SMC5-202ENST00000471372 ACVR2AP27037 513 aa7.71□□□□□ -1.18
SMC5-202ENST00000471372 CSF2RBP32927 897 aa7.71□□□□□ -1.18
SMC5-202ENST00000471372 PTTG1IPP53801 180 aa7.71□□□□□ -1.18
SMC5-202ENST00000471372 RAP2BP61225 183 aa7.71□□□□□ -1.18
SMC5-202ENST00000471372 HGFACQ04756 655 aa7.71□□□□□ -1.18
SMC5-202ENST00000471372 SLC29A2Q14542 456 aa7.71□□□□□ -1.18
SMC5-202ENST00000471372 VPS53Q5VIR6 699 aa7.71□□□□□ -1.18
SMC5-202ENST00000471372 ANKS6Q68DC2 871 aa7.71□□□□□ -1.18
SMC5-202ENST00000471372 KLHL17Q6TDP4 642 aa7.71□□□□□ -1.18
SMC5-202ENST00000471372 MPZL3Q6UWV2 235 aa7.71□□□□□ -1.18
SMC5-202ENST00000471372 USP30Q70CQ3 517 aa7.71□□□□□ -1.18
SMC5-202ENST00000471372 C2CD5Q86YS7 1000 aa7.71□□□□□ -1.18
SMC5-202ENST00000471372 HERC6Q8IVU3 1022 aa7.71□□□□□ -1.18
SMC5-202ENST00000471372 TMIEQ8NEW7 156 aa7.71□□□□□ -1.18
SMC5-202ENST00000471372 NLGN4YQ8NFZ3 816 aaPredicted RBP7.71□□□□□ -1.18
SMC5-202ENST00000471372 AJUBAQ96IF1 538 aa7.71□□□□□ -1.18
SMC5-202ENST00000471372 UNC45AQ9H3U1 944 aa7.71□□□□□ -1.18
SMC5-202ENST00000471372 ALG13Q9NP73 1137 aaKnown RBP7.71□□□□□ -1.18
SMC5-202ENST00000471372 RASSF1Q9NS23 344 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms