RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 TMEM63CQ9P1W3 806 aa21.21■□□□□ 0.99
HDAC7-220ENST00000471235 ARMCX3Q9UH62 379 aaPredicted RBP21.21■□□□□ 0.99
HDAC7-220ENST00000471235 C5orf42Q9H799 3197 aa21.21■□□□□ 0.99
HDAC7-220ENST00000471235 OBSL1O75147 1896 aa21.2■□□□□ 0.98
HDAC7-220ENST00000471235 GREB1Q4ZG55 1949 aa21.2■□□□□ 0.98
HDAC7-220ENST00000471235 RFPL2O75678 378 aa21.2■□□□□ 0.98
HDAC7-220ENST00000471235 ABLIM3O94929 683 aa21.2■□□□□ 0.98
HDAC7-220ENST00000471235 HLA-DRAP01903 254 aa21.2■□□□□ 0.98
HDAC7-220ENST00000471235 ITIH3Q06033 890 aa21.2■□□□□ 0.98
HDAC7-220ENST00000471235 SMAD2Q15796 467 aaKnown RBP21.2■□□□□ 0.98
HDAC7-220ENST00000471235 ZNF699Q32M78 642 aa21.2■□□□□ 0.98
HDAC7-220ENST00000471235 CCDC40Q4G0X9 1142 aa21.2■□□□□ 0.98
HDAC7-220ENST00000471235 TMC5Q6UXY8 1006 aa21.2■□□□□ 0.98
HDAC7-220ENST00000471235 TMEM86AQ8N2M4 240 aa21.2■□□□□ 0.98
HDAC7-220ENST00000471235 CMASQ8NFW8 434 aaPredicted RBP21.2■□□□□ 0.98
HDAC7-220ENST00000471235 ZNF461Q8TAF7 563 aa21.2■□□□□ 0.98
HDAC7-220ENST00000471235 SPATA18Q8TC71 538 aa21.2■□□□□ 0.98
HDAC7-220ENST00000471235 ELMO3Q96BJ8 720 aa21.2■□□□□ 0.98
HDAC7-220ENST00000471235 ADAM7Q9H2U9 754 aa21.2■□□□□ 0.98
HDAC7-220ENST00000471235 VRTNQ9H8Y1 702 aa21.2■□□□□ 0.98
HDAC7-220ENST00000471235 POLIQ9UNA4 740 aa21.2■□□□□ 0.98
HDAC7-220ENST00000471235 DENND4CQ5VZ89 1909 aa21.19■□□□□ 0.98
HDAC7-220ENST00000471235 ZMYND10O75800 440 aa21.19■□□□□ 0.98
HDAC7-220ENST00000471235 PAPLNO95428 1278 aa21.19■□□□□ 0.98
HDAC7-220ENST00000471235 VNN2O95498 520 aa21.19■□□□□ 0.98
HDAC7-220ENST00000471235 C8AP07357 584 aa21.19■□□□□ 0.98
HDAC7-220ENST00000471235 WEE2P0C1S8 567 aa21.19■□□□□ 0.98
HDAC7-220ENST00000471235 GTF2H1P32780 548 aa21.19■□□□□ 0.98
HDAC7-220ENST00000471235 MXI1P50539 228 aa21.19■□□□□ 0.98
HDAC7-220ENST00000471235 TNNC1P63316 161 aa21.19■□□□□ 0.98
HDAC7-220ENST00000471235 TCERG1LQ5VWI1 586 aa21.19■□□□□ 0.98
HDAC7-220ENST00000471235 TPGS2Q68CL5 300 aa21.19■□□□□ 0.98
HDAC7-220ENST00000471235 RNF19BQ6ZMZ0 732 aa21.19■□□□□ 0.98
HDAC7-220ENST00000471235 FRMD5Q7Z6J6 570 aa21.19■□□□□ 0.98
HDAC7-220ENST00000471235 THEM5Q8N1Q8 247 aa21.19■□□□□ 0.98
HDAC7-220ENST00000471235 SLC7A14Q8TBB6 771 aa21.19■□□□□ 0.98
HDAC7-220ENST00000471235 TAS1R2Q8TE23 839 aa21.19■□□□□ 0.98
HDAC7-220ENST00000471235 KBTBD7Q8WVZ9 684 aa21.19■□□□□ 0.98
HDAC7-220ENST00000471235 SLC35C1Q96A29 364 aa21.19■□□□□ 0.98
HDAC7-220ENST00000471235 ZNF707Q96C28 371 aaPredicted RBP21.19■□□□□ 0.98
HDAC7-220ENST00000471235 ZCWPW1Q9H0M4 648 aa21.19■□□□□ 0.98
HDAC7-220ENST00000471235 METTL14Q9HCE5 456 aaKnown RBP21.19■□□□□ 0.98
HDAC7-220ENST00000471235 ZDHHC7Q9NXF8 308 aa21.19■□□□□ 0.98
HDAC7-220ENST00000471235 AFF4Q9UHB7 1163 aaKnown RBP21.19■□□□□ 0.98
HDAC7-220ENST00000471235 DACH1Q9UI36 760 aa21.19■□□□□ 0.98
HDAC7-220ENST00000471235 FAM50BQ9Y247 325 aa21.19■□□□□ 0.98
HDAC7-220ENST00000471235 STX10O60499 249 aa21.18■□□□□ 0.98
HDAC7-220ENST00000471235 CLSTN1O94985 981 aa21.18■□□□□ 0.98
HDAC7-220ENST00000471235 SEC24AO95486 1093 aa21.18■□□□□ 0.98
HDAC7-220ENST00000471235 ATF2P15336 505 aa21.18■□□□□ 0.98
HDAC7-220ENST00000471235 WDR72Q3MJ13 1102 aa21.18■□□□□ 0.98
HDAC7-220ENST00000471235 KRT39Q6A163 491 aa21.18■□□□□ 0.98
HDAC7-220ENST00000471235 CES5AQ6NT32 575 aa21.18■□□□□ 0.98
HDAC7-220ENST00000471235 DPH6Q7L8W6 267 aa21.18■□□□□ 0.98
HDAC7-220ENST00000471235 GPR149Q86SP6 731 aa21.18■□□□□ 0.98
HDAC7-220ENST00000471235 PGLYRP2Q96PD5 576 aa21.18■□□□□ 0.98
HDAC7-220ENST00000471235 MMS19Q96T76 1030 aa21.18■□□□□ 0.98
HDAC7-220ENST00000471235 SRRTQ9BXP5 876 aaKnown RBP21.18■□□□□ 0.98
HDAC7-220ENST00000471235 DDX43Q9NXZ2 648 aaKnown RBP21.18■□□□□ 0.98
HDAC7-220ENST00000471235 NXF1Q9UBU9 619 aaKnown RBP21.18■□□□□ 0.98
HDAC7-220ENST00000471235 CCDC195A0A1B0GUA6 201 aa21.17■□□□□ 0.98
HDAC7-220ENST00000471235 MTMR11A4FU01 709 aa21.17■□□□□ 0.98
HDAC7-220ENST00000471235 GABRDO14764 452 aa21.17■□□□□ 0.98
HDAC7-220ENST00000471235 HCRTO43612 131 aa21.17■□□□□ 0.98
HDAC7-220ENST00000471235 ASS1P00966 412 aaKnown RBP21.17■□□□□ 0.98
HDAC7-220ENST00000471235 WARSP23381 471 aaKnown RBP21.17■□□□□ 0.98
HDAC7-220ENST00000471235 HOXA9P31269 272 aa21.17■□□□□ 0.98
HDAC7-220ENST00000471235 MYL7Q01449 175 aa21.17■□□□□ 0.98
HDAC7-220ENST00000471235 ADCY1Q08828 1119 aa21.17■□□□□ 0.98
HDAC7-220ENST00000471235 GPR17Q13304 367 aa21.17■□□□□ 0.98
HDAC7-220ENST00000471235 CBX2Q14781 532 aaPredicted RBP21.17■□□□□ 0.98
HDAC7-220ENST00000471235 CBWD6Q4V339 395 aa21.17■□□□□ 0.98
HDAC7-220ENST00000471235 ZNF667Q5HYK9 610 aa21.17■□□□□ 0.98
HDAC7-220ENST00000471235 CBWD3Q5JTY5 395 aa21.17■□□□□ 0.98
HDAC7-220ENST00000471235 CBWD5Q5RIA9 395 aa21.17■□□□□ 0.98
HDAC7-220ENST00000471235 PPM1LQ5SGD2 360 aa21.17■□□□□ 0.98
HDAC7-220ENST00000471235 SPOPLQ6IQ16 392 aa21.17■□□□□ 0.98
HDAC7-220ENST00000471235 SCARA5Q6ZMJ2 495 aa21.17■□□□□ 0.98
HDAC7-220ENST00000471235 CCDC149Q6ZUS6 474 aa21.17■□□□□ 0.98
HDAC7-220ENST00000471235 ADAMTS19Q8TE59 1207 aa21.17■□□□□ 0.98
HDAC7-220ENST00000471235 MRPL45Q9BRJ2 306 aaKnown RBP21.17■□□□□ 0.98
HDAC7-220ENST00000471235 PI4K2AQ9BTU6 479 aa21.17■□□□□ 0.98
HDAC7-220ENST00000471235 SMYD3Q9H7B4 428 aa21.17■□□□□ 0.98
HDAC7-220ENST00000471235 PATJQ8NI35 1801 aa21.17■□□□□ 0.98
HDAC7-220ENST00000471235 ZNF638Q14966 1978 aaKnown RBP21.16■□□□□ 0.98
HDAC7-220ENST00000471235 PRRG1O14668 218 aa21.16■□□□□ 0.98
HDAC7-220ENST00000471235 GNA14O95837 355 aa21.16■□□□□ 0.98
HDAC7-220ENST00000471235 HNRNPA1P09651 372 aaKnown RBP eCLIP21.16■□□□□ 0.98
HDAC7-220ENST00000471235 ACAT1P24752 427 aaKnown RBP21.16■□□□□ 0.98
HDAC7-220ENST00000471235 ERCC5P28715 1186 aaPredicted RBP21.16■□□□□ 0.98
HDAC7-220ENST00000471235 MTHFRP42898 656 aa21.16■□□□□ 0.98
HDAC7-220ENST00000471235 LHX1P48742 406 aa21.16■□□□□ 0.98
HDAC7-220ENST00000471235 MARSP56192 900 aaKnown RBP21.16■□□□□ 0.98
HDAC7-220ENST00000471235 SGSM1Q2NKQ1 1148 aa21.16■□□□□ 0.98
HDAC7-220ENST00000471235 SLC39A12Q504Y0 691 aa21.16■□□□□ 0.98
HDAC7-220ENST00000471235 CAVIN1Q6NZI2 390 aaKnown RBP21.16■□□□□ 0.98
HDAC7-220ENST00000471235 TCEAL8Q8IYN2 117 aa21.16■□□□□ 0.98
HDAC7-220ENST00000471235 SMG7Q92540 1137 aaKnown RBP21.16■□□□□ 0.98
HDAC7-220ENST00000471235 TAF4BQ92750 862 aa21.16■□□□□ 0.98
HDAC7-220ENST00000471235 RIPOR3Q96MK2 946 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms