RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 CALML3P27482 149 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 TKTP29401 623 aaKnown RBP4.45□□□□□ -1.7
VPS50-210ENST00000471188 PRKCIP41743 596 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 PTGIRP43119 386 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 MARCKSL1P49006 195 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 ITGA8P53708 1063 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 PSMC1P62191 440 aaKnown RBP4.45□□□□□ -1.7
VPS50-210ENST00000471188 ZNF200P98182 395 aaPredicted RBP4.45□□□□□ -1.7
VPS50-210ENST00000471188 TRIM32Q13049 653 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 RASGRF1Q13972 1273 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 RASA2Q15283 850 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 SLC1A5Q15758 541 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 ANKDD1AQ495B1 522 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 FAAH2Q6GMR7 532 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 LPCAT2Q7L5N7 544 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 SFR1Q86XK3 245 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 PEX5LQ8IYB4 626 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 ULK2Q8IYT8 1036 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 GUF1Q8N442 669 aaKnown RBP4.45□□□□□ -1.7
VPS50-210ENST00000471188 USP33Q8TEY7 942 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 KRT35Q92764 455 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 ART4Q93070 314 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 CEP295NLQ96MC4 621 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 GPATCH1Q9BRR8 931 aaKnown RBP4.45□□□□□ -1.7
VPS50-210ENST00000471188 TMEM120AQ9BXJ8 343 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 CEP44Q9C0F1 390 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 Q9H521 79 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 PSTPIP2Q9H939 334 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 VPS37BQ9H9H4 285 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 OLFML3Q9NRN5 406 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 DKK3Q9UBP4 350 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 ANAPC5Q9UJX4 755 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 CARD8Q9Y2G2 431 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 DIS3Q9Y2L1 958 aaKnown RBP4.45□□□□□ -1.7
VPS50-210ENST00000471188 NEU2Q9Y3R4 380 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 TACC3Q9Y6A5 838 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 NUMBLQ9Y6R0 609 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 SCINQ9Y6U3 715 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 ADGRA3Q8IWK6 1321 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 TCRBV7S2A1N4TA0A589 114 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 MYMKA6NI61 221 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 BTNL10A8MVZ5 291 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 BTBD19C9JJ37 291 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 F8W8V4 182 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 GOLGA8TH3BQL2 631 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 FCHO1O14526 889 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 DDX3YO15523 660 aaKnown RBP4.44□□□□□ -1.7
VPS50-210ENST00000471188 MARCH6O60337 910 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 GOLGA8HP0CJ92 632 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 DLATP10515 647 aaKnown RBP4.44□□□□□ -1.7
VPS50-210ENST00000471188 MYCLP1P12525 358 aaPredicted RBP4.44□□□□□ -1.7
VPS50-210ENST00000471188 ATF2P15336 505 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 HSPA6P17066 643 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 COILP38432 576 aaPredicted RBP4.44□□□□□ -1.7
VPS50-210ENST00000471188 FOXO4P98177 505 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 PKN2Q16513 984 aaKnown RBP4.44□□□□□ -1.7
VPS50-210ENST00000471188 CTC1Q2NKJ3 1217 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 SGO2Q562F6 1265 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 GJB7Q6PEY0 223 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 Q6ZNX1 250 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 LRRC55Q6ZSA7 311 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 FASTKD5Q7L8L6 764 aaKnown RBP4.44□□□□□ -1.7
VPS50-210ENST00000471188 IRF2BP2Q7Z5L9 587 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 NET1Q7Z628 596 aaPredicted RBP4.44□□□□□ -1.7
VPS50-210ENST00000471188 TMPRSS6Q8IU80 811 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 METTL25Q8N6Q8 603 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 RBM15BQ8NDT2 890 aaKnown RBP4.44□□□□□ -1.7
VPS50-210ENST00000471188 FBXO27Q8NI29 283 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 PLEKHO2Q8TD55 490 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 RFFLQ8WZ73 363 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 RILPQ96NA2 401 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 KLF6Q99612 283 aaPredicted RBP4.44□□□□□ -1.7
VPS50-210ENST00000471188 C7orf25Q9BPX7 421 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 POLR3CQ9BUI4 534 aaPredicted RBP4.44□□□□□ -1.7
VPS50-210ENST00000471188 C12orf65Q9H3J6 166 aaKnown RBP4.44□□□□□ -1.7
VPS50-210ENST00000471188 ZBTB3Q9H5J0 574 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 CYP4F11Q9HBI6 524 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 CNNM1Q9NRU3 951 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 NINJ2Q9NZG7 142 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 HESX1Q9UBX0 185 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 SLC7A8Q9UHI5 535 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 STXBP5LQ9Y2K9 1186 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 ALG6Q9Y672 507 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 USP6P35125 1406 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 SPATA31A3Q5VYP0 1347 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 ECM29Q5VYK3 1845 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 MRC1P22897 1456 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 MYH11P35749 1972 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 LRP6O75581 1613 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 MEI4A8MW99 385 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 ST8SIA5O15466 376 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 FKBP6O75344 327 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 KRT18P05783 430 aaKnown RBP4.44□□□□□ -1.7
VPS50-210ENST00000471188 SRGAP2CP0DJJ0 459 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 SRGAP2BP0DMP2 458 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 RARBP10826 455 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 MYL2P10916 166 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 PLS3P13797 630 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 TNFAIP3P21580 790 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 ADRA1DP25100 572 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms