RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 MORF4L2Q15014 288 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 ATP13A4Q4VNC1 1196 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 SPOCD1Q6ZMY3 1216 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 SCYL3Q8IZE3 742 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 DEPTORQ8TB45 409 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 TMEM143Q96AN5 459 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 MSTO1Q9BUK6 570 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 TARS2Q9BW92 718 aaKnown RBP14.44□□□□□ -0.1
BRCA1-209ENST00000470026 PHACTR1Q9C0D0 580 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 TBK1Q9UHD2 729 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 USTQ9Y2C2 406 aa14.44□□□□□ -0.1
BRCA1-209ENST00000470026 hCG_1818297A0A087WSY0 165 aa14.43□□□□□ -0.1
BRCA1-209ENST00000470026 A0A1B0GUA9 196 aa14.43□□□□□ -0.1
BRCA1-209ENST00000470026 NDC80O14777 642 aa14.43□□□□□ -0.1
BRCA1-209ENST00000470026 FAM189A1O60320 539 aa14.43□□□□□ -0.1
BRCA1-209ENST00000470026 EGFRP00533 1210 aa14.43□□□□□ -0.1
BRCA1-209ENST00000470026 DPEP1P16444 411 aa14.43□□□□□ -0.1
BRCA1-209ENST00000470026 TGFB2P61812 414 aa14.43□□□□□ -0.1
BRCA1-209ENST00000470026 IL9RQ01113 521 aa14.43□□□□□ -0.1
BRCA1-209ENST00000470026 TMEM132BQ14DG7 1078 aa14.43□□□□□ -0.1
BRCA1-209ENST00000470026 RNASEH2BQ5TBB1 312 aaKnown RBP14.43□□□□□ -0.1
BRCA1-209ENST00000470026 TLDC1Q6P9B6 456 aa14.43□□□□□ -0.1
BRCA1-209ENST00000470026 ZNF526Q8TF50 670 aaPredicted RBP14.43□□□□□ -0.1
BRCA1-209ENST00000470026 TCP11Q8WWU5 503 aa14.43□□□□□ -0.1
BRCA1-209ENST00000470026 RMDN2Q96LZ7 410 aa14.43□□□□□ -0.1
BRCA1-209ENST00000470026 ZNF518BQ9C0D4 1074 aa14.43□□□□□ -0.1
BRCA1-209ENST00000470026 EBF2Q9HAK2 575 aa14.43□□□□□ -0.1
BRCA1-209ENST00000470026 SAYSD1Q9NPB0 183 aa14.43□□□□□ -0.1
BRCA1-209ENST00000470026 FBXO40Q9UH90 709 aa14.43□□□□□ -0.1
BRCA1-209ENST00000470026 STARD13Q9Y3M8 1113 aa14.43□□□□□ -0.1
BRCA1-209ENST00000470026 ITGAVP06756 1048 aa14.42□□□□□ -0.1
BRCA1-209ENST00000470026 KRT10P13645 584 aa14.42□□□□□ -0.1
BRCA1-209ENST00000470026 EZRP15311 586 aaKnown RBP14.42□□□□□ -0.1
BRCA1-209ENST00000470026 VCPP55072 806 aaKnown RBP14.42□□□□□ -0.1
BRCA1-209ENST00000470026 OGDHQ02218 1023 aa14.42□□□□□ -0.1
BRCA1-209ENST00000470026 TAP1Q03518 808 aa14.42□□□□□ -0.1
BRCA1-209ENST00000470026 TARBP2Q15633 366 aaKnown RBP14.42□□□□□ -0.1
BRCA1-209ENST00000470026 SEPT14Q6ZU15 432 aa14.42□□□□□ -0.1
BRCA1-209ENST00000470026 GSTA5Q7RTV2 222 aa14.42□□□□□ -0.1
BRCA1-209ENST00000470026 BRSK2Q8IWQ3 736 aa14.42□□□□□ -0.1
BRCA1-209ENST00000470026 ZNF302Q9NR11 478 aa14.42□□□□□ -0.1
BRCA1-209ENST00000470026 SENP1Q9P0U3 644 aa14.42□□□□□ -0.1
BRCA1-209ENST00000470026 KLHL14Q9P2G3 628 aa14.42□□□□□ -0.1
BRCA1-209ENST00000470026 BAIAP2L1Q9UHR4 511 aa14.42□□□□□ -0.1
BRCA1-209ENST00000470026 SHOC2Q9UQ13 582 aa14.42□□□□□ -0.1
BRCA1-209ENST00000470026 IVNS1ABPQ9Y6Y0 642 aa14.42□□□□□ -0.1
BRCA1-209ENST00000470026 EXOC1LA0A1B0GW35 172 aa14.42□□□□□ -0.1
BRCA1-209ENST00000470026 IGF2BP3O00425 579 aaKnown RBP eCLIP14.42□□□□□ -0.1
BRCA1-209ENST00000470026 KRT1P04264 644 aa14.42□□□□□ -0.1
BRCA1-209ENST00000470026 PECAM1P16284 738 aaPredicted RBP14.42□□□□□ -0.1
BRCA1-209ENST00000470026 SSTR3P32745 418 aaPredicted RBP14.42□□□□□ -0.1
BRCA1-209ENST00000470026 ALDH5A1P51649 535 aaPredicted RBP14.42□□□□□ -0.1
BRCA1-209ENST00000470026 ARSEP51690 589 aa14.42□□□□□ -0.1
BRCA1-209ENST00000470026 SP4Q02446 784 aa14.42□□□□□ -0.1
BRCA1-209ENST00000470026 TMED2Q15363 201 aa14.42□□□□□ -0.1
BRCA1-209ENST00000470026 WDR72Q3MJ13 1102 aa14.42□□□□□ -0.1
BRCA1-209ENST00000470026 SCARA3Q6AZY7 606 aa14.42□□□□□ -0.1
BRCA1-209ENST00000470026 CYP4F22Q6NT55 531 aa14.42□□□□□ -0.1
BRCA1-209ENST00000470026 ZPBP2Q6X784 338 aa14.42□□□□□ -0.1
BRCA1-209ENST00000470026 CEP57Q86XR8 500 aa14.42□□□□□ -0.1
BRCA1-209ENST00000470026 ECHDC2Q86YB7 292 aa14.42□□□□□ -0.1
BRCA1-209ENST00000470026 ZNF280CQ8ND82 737 aa14.42□□□□□ -0.1
BRCA1-209ENST00000470026 SLC35B2Q8TB61 432 aa14.42□□□□□ -0.1
BRCA1-209ENST00000470026 ACAD9Q9H845 621 aa14.42□□□□□ -0.1
BRCA1-209ENST00000470026 AS3MTQ9HBK9 375 aa14.42□□□□□ -0.1
BRCA1-209ENST00000470026 PCDH9Q9HC56 1237 aa14.42□□□□□ -0.1
BRCA1-209ENST00000470026 DDX56Q9NY93 547 aaKnown RBP14.42□□□□□ -0.1
BRCA1-209ENST00000470026 GGT7Q9UJ14 662 aa14.42□□□□□ -0.1
BRCA1-209ENST00000470026 PNMA3Q9UL41 463 aa14.42□□□□□ -0.1
BRCA1-209ENST00000470026 PCDHGC3Q9UN70 934 aa14.42□□□□□ -0.1
BRCA1-209ENST00000470026 SMG5Q9UPR3 1016 aaKnown RBP14.42□□□□□ -0.1
BRCA1-209ENST00000470026 EFR3BQ9Y2G0 817 aa14.42□□□□□ -0.1
BRCA1-209ENST00000470026 GSTTP1A0A1W2PQM5 241 aa14.41□□□□□ -0.1
BRCA1-209ENST00000470026 LRRIQ4A6NIV6 560 aa14.41□□□□□ -0.1
BRCA1-209ENST00000470026 PI4K2BG5E9Z4 385 aa14.41□□□□□ -0.1
BRCA1-209ENST00000470026 ZSCAN5DPP0CG00 497 aa14.41□□□□□ -0.1
BRCA1-209ENST00000470026 PTPRAP18433 802 aa14.41□□□□□ -0.1
BRCA1-209ENST00000470026 RFC5P40937 340 aa14.41□□□□□ -0.1
BRCA1-209ENST00000470026 CDKN2BP42772 138 aa14.41□□□□□ -0.1
BRCA1-209ENST00000470026 PIGHQ14442 188 aaPredicted RBP14.41□□□□□ -0.1
BRCA1-209ENST00000470026 ZKSCAN8Q15776 578 aaPredicted RBP14.41□□□□□ -0.1
BRCA1-209ENST00000470026 TFDP3Q5H9I0 405 aa14.41□□□□□ -0.1
BRCA1-209ENST00000470026 PNMA8AQ86V59 439 aaPredicted RBP14.41□□□□□ -0.1
BRCA1-209ENST00000470026 WDR49Q8IV35 697 aa14.41□□□□□ -0.1
BRCA1-209ENST00000470026 PLCD3Q8N3E9 789 aa14.41□□□□□ -0.1
BRCA1-209ENST00000470026 KLHL29Q96CT2 875 aa14.41□□□□□ -0.1
BRCA1-209ENST00000470026 L3MBTL3Q96JM7 780 aaPredicted RBP14.41□□□□□ -0.1
BRCA1-209ENST00000470026 TEX13BQ9BXU2 312 aa14.41□□□□□ -0.1
BRCA1-209ENST00000470026 KLHL11Q9NVR0 708 aa14.41□□□□□ -0.1
BRCA1-209ENST00000470026 STK32BQ9NY57 414 aa14.41□□□□□ -0.1
BRCA1-209ENST00000470026 FETUBQ9UGM5 382 aa14.41□□□□□ -0.1
BRCA1-209ENST00000470026 SLC24A2Q9UI40 661 aa14.41□□□□□ -0.1
BRCA1-209ENST00000470026 ZNF148Q9UQR1 794 aa14.41□□□□□ -0.1
BRCA1-209ENST00000470026 C3orf70A6NLC5 250 aaPredicted RBP14.41□□□□□ -0.1
BRCA1-209ENST00000470026 F8VP50 259 aa14.41□□□□□ -0.1
BRCA1-209ENST00000470026 ADCY3O60266 1144 aa14.41□□□□□ -0.1
BRCA1-209ENST00000470026 CST3P01034 146 aaPredicted RBP14.41□□□□□ -0.1
BRCA1-209ENST00000470026 GJC1P36383 396 aa14.41□□□□□ -0.1
BRCA1-209ENST00000470026 SSR1P43307 286 aaKnown RBP14.41□□□□□ -0.1
BRCA1-209ENST00000470026 YARSP54577 528 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms