RNA–Protein interactions for RNA: ENST00000469769.1

THBS3-206, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-206ENST00000469769 OAZ2O95190 189 aa11.09□□□□□ -0.63
THBS3-206ENST00000469769 PNMA6AP0CW24 399 aaPredicted RBP11.09□□□□□ -0.63
THBS3-206ENST00000469769 ATP2A2P16615 1042 aaKnown RBP11.09□□□□□ -0.63
THBS3-206ENST00000469769 LAG3P18627 525 aa11.09□□□□□ -0.63
THBS3-206ENST00000469769 FGFR3P22607 806 aa11.09□□□□□ -0.63
THBS3-206ENST00000469769 BRCC3P46736 316 aa11.09□□□□□ -0.63
THBS3-206ENST00000469769 LHX1P48742 406 aa11.09□□□□□ -0.63
THBS3-206ENST00000469769 ALDH7A1P49419 539 aaKnown RBP11.09□□□□□ -0.63
THBS3-206ENST00000469769 ELAVL2Q12926 359 aaKnown RBP11.09□□□□□ -0.63
THBS3-206ENST00000469769 BTG3Q14201 252 aaPredicted RBP11.09□□□□□ -0.63
THBS3-206ENST00000469769 SHHQ15465 462 aa11.09□□□□□ -0.63
THBS3-206ENST00000469769 ASIC2Q16515 512 aa11.09□□□□□ -0.63
THBS3-206ENST00000469769 TSR1Q2NL82 804 aaKnown RBP11.09□□□□□ -0.63
THBS3-206ENST00000469769 C9orf50Q5SZB4 431 aa11.09□□□□□ -0.63
THBS3-206ENST00000469769 WSCD1Q658N2 575 aa11.09□□□□□ -0.63
THBS3-206ENST00000469769 TMEM270Q6UE05 265 aa11.09□□□□□ -0.63
THBS3-206ENST00000469769 KCNT2Q6UVM3 1135 aa11.09□□□□□ -0.63
THBS3-206ENST00000469769 CYP26C1Q6V0L0 522 aa11.09□□□□□ -0.63
THBS3-206ENST00000469769 OSTM1Q86WC4 334 aa11.09□□□□□ -0.63
THBS3-206ENST00000469769 TMEM173Q86WV6 379 aaPredicted RBP11.09□□□□□ -0.63
THBS3-206ENST00000469769 ZNF677Q86XU0 584 aa11.09□□□□□ -0.63
THBS3-206ENST00000469769 CCDC170Q8IYT3 715 aa11.09□□□□□ -0.63
THBS3-206ENST00000469769 SLC39A11Q8N1S5 342 aa11.09□□□□□ -0.63
THBS3-206ENST00000469769 SLC4A11Q8NBS3 891 aa11.09□□□□□ -0.63
THBS3-206ENST00000469769 SLC30A5Q8TAD4 765 aa11.09□□□□□ -0.63
THBS3-206ENST00000469769 IGSF21Q96ID5 467 aa11.09□□□□□ -0.63
THBS3-206ENST00000469769 TWNKQ96RR1 684 aa11.09□□□□□ -0.63
THBS3-206ENST00000469769 YME1L1Q96TA2 773 aa11.09□□□□□ -0.63
THBS3-206ENST00000469769 ELOVL4Q9GZR5 314 aa11.09□□□□□ -0.63
THBS3-206ENST00000469769 PRO3102Q9H379 93 aa11.09□□□□□ -0.63
THBS3-206ENST00000469769 CHST7Q9NS84 486 aa11.09□□□□□ -0.63
THBS3-206ENST00000469769 ZNHIT6Q9NWK9 470 aaKnown RBP11.09□□□□□ -0.63
THBS3-206ENST00000469769 KIAA1257Q9ULG3 409 aa11.09□□□□□ -0.63
THBS3-206ENST00000469769 NENFQ9UMX5 172 aa11.09□□□□□ -0.63
THBS3-206ENST00000469769 STXBP5LQ9Y2K9 1186 aa11.09□□□□□ -0.63
THBS3-206ENST00000469769 PCDHB4Q9Y5E5 795 aa11.09□□□□□ -0.63
THBS3-206ENST00000469769 ARHGAP6O43182 974 aa11.08□□□□□ -0.64
THBS3-206ENST00000469769 TBC1D4O60343 1298 aa11.08□□□□□ -0.64
THBS3-206ENST00000469769 TADA2AO75478 443 aa11.08□□□□□ -0.64
THBS3-206ENST00000469769 LCA5LO95447 670 aa11.08□□□□□ -0.64
THBS3-206ENST00000469769 ODC1P11926 461 aa11.08□□□□□ -0.64
THBS3-206ENST00000469769 CYP11B1P15538 503 aa11.08□□□□□ -0.64
THBS3-206ENST00000469769 CHRNB2P17787 502 aa11.08□□□□□ -0.64
THBS3-206ENST00000469769 DEKP35659 375 aaKnown RBP11.08□□□□□ -0.64
THBS3-206ENST00000469769 RAP1GAPP47736 663 aa11.08□□□□□ -0.64
THBS3-206ENST00000469769 NDST1P52848 882 aa11.08□□□□□ -0.64
THBS3-206ENST00000469769 PTK2Q05397 1052 aa11.08□□□□□ -0.64
THBS3-206ENST00000469769 KLHL30Q0D2K2 578 aa11.08□□□□□ -0.64
THBS3-206ENST00000469769 PAN2Q504Q3 1202 aaKnown RBP11.08□□□□□ -0.64
THBS3-206ENST00000469769 FUT10Q6P4F1 479 aa11.08□□□□□ -0.64
THBS3-206ENST00000469769 SCARA5Q6ZMJ2 495 aa11.08□□□□□ -0.64
THBS3-206ENST00000469769 ZNF571Q7Z3V5 609 aaPredicted RBP11.08□□□□□ -0.64
THBS3-206ENST00000469769 SLC47A2Q86VL8 602 aa11.08□□□□□ -0.64
THBS3-206ENST00000469769 ADGRF2Q8IZF7 708 aa11.08□□□□□ -0.64
THBS3-206ENST00000469769 RBBP8NLQ8NC74 664 aaPredicted RBP11.08□□□□□ -0.64
THBS3-206ENST00000469769 BCL7CQ8WUZ0 217 aaPredicted RBP11.08□□□□□ -0.64
THBS3-206ENST00000469769 RABGGTAQ92696 567 aa11.08□□□□□ -0.64
THBS3-206ENST00000469769 TMEM176AQ96HP8 235 aa11.08□□□□□ -0.64
THBS3-206ENST00000469769 ZNF558Q96NG5 402 aa11.08□□□□□ -0.64
THBS3-206ENST00000469769 MMS19Q96T76 1030 aa11.08□□□□□ -0.64
THBS3-206ENST00000469769 PKMYT1Q99640 499 aa11.08□□□□□ -0.64
THBS3-206ENST00000469769 RTP3Q9BQQ7 232 aa11.08□□□□□ -0.64
THBS3-206ENST00000469769 ZSWIM1Q9BR11 485 aa11.08□□□□□ -0.64
THBS3-206ENST00000469769 NT5C1AQ9BXI3 368 aa11.08□□□□□ -0.64
THBS3-206ENST00000469769 GPR62Q9BZJ7 368 aa11.08□□□□□ -0.64
THBS3-206ENST00000469769 HAUS4Q9H6D7 363 aa11.08□□□□□ -0.64
THBS3-206ENST00000469769 HMGXB4Q9UGU5 601 aa11.08□□□□□ -0.64
THBS3-206ENST00000469769 PCDHGC3Q9UN70 934 aa11.08□□□□□ -0.64
THBS3-206ENST00000469769 PRG3Q9Y2Y8 225 aaPredicted RBP11.08□□□□□ -0.64
THBS3-206ENST00000469769 SF3B1O75533 1304 aaKnown RBP eCLIP11.08□□□□□ -0.64
THBS3-206ENST00000469769 RANBP2P49792 3224 aaKnown RBP11.07□□□□□ -0.64
THBS3-206ENST00000469769 GBF1Q92538 1859 aa11.07□□□□□ -0.64
THBS3-206ENST00000469769 C5orf67F2Z3F1 127 aa11.07□□□□□ -0.64
THBS3-206ENST00000469769 H0YGN5 161 aa11.07□□□□□ -0.64
THBS3-206ENST00000469769 PTMAP06454 111 aaKnown RBP11.07□□□□□ -0.64
THBS3-206ENST00000469769 PLEKP08567 350 aaPredicted RBP11.07□□□□□ -0.64
THBS3-206ENST00000469769 VDRP11473 427 aa11.07□□□□□ -0.64
THBS3-206ENST00000469769 SKILP12757 684 aa11.07□□□□□ -0.64
THBS3-206ENST00000469769 LMO2P25791 158 aa11.07□□□□□ -0.64
THBS3-206ENST00000469769 CDH5P33151 784 aaPredicted RBP11.07□□□□□ -0.64
THBS3-206ENST00000469769 PPM1AP35813 382 aa11.07□□□□□ -0.64
THBS3-206ENST00000469769 GNL1P36915 607 aaPredicted RBP11.07□□□□□ -0.64
THBS3-206ENST00000469769 CDR2Q01850 454 aa11.07□□□□□ -0.64
THBS3-206ENST00000469769 PLCB3Q01970 1234 aa11.07□□□□□ -0.64
THBS3-206ENST00000469769 BMS1Q14692 1282 aaKnown RBP11.07□□□□□ -0.64
THBS3-206ENST00000469769 CNGA2Q16280 664 aa11.07□□□□□ -0.64
THBS3-206ENST00000469769 ARHGAP17Q68EM7 881 aa11.07□□□□□ -0.64
THBS3-206ENST00000469769 FAM117BQ6P1L5 589 aa11.07□□□□□ -0.64
THBS3-206ENST00000469769 FAM171BQ6P995 826 aa11.07□□□□□ -0.64
THBS3-206ENST00000469769 RAD9BQ6WBX8 426 aa11.07□□□□□ -0.64
THBS3-206ENST00000469769 DSTYKQ6XUX3 929 aa11.07□□□□□ -0.64
THBS3-206ENST00000469769 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.07□□□□□ -0.64
THBS3-206ENST00000469769 NOP9Q86U38 636 aaKnown RBP11.07□□□□□ -0.64
THBS3-206ENST00000469769 FIBCD1Q8N539 461 aa11.07□□□□□ -0.64
THBS3-206ENST00000469769 COLGALT1Q8NBJ5 622 aa11.07□□□□□ -0.64
THBS3-206ENST00000469769 ZNF606Q8WXB4 792 aa11.07□□□□□ -0.64
THBS3-206ENST00000469769 TFAP2BQ92481 460 aa11.07□□□□□ -0.64
THBS3-206ENST00000469769 ACBD6Q9BR61 282 aa11.07□□□□□ -0.64
THBS3-206ENST00000469769 PLVAPQ9BX97 442 aa11.07□□□□□ -0.64
THBS3-206ENST00000469769 VN1R3Q9BXE9 311 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms