RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 KLC2Q9H0B6 622 aa5.05□□□□□ -1.6
VPS8-220ENST00000469713 SIK2Q9H0K1 926 aa5.05□□□□□ -1.6
VPS8-220ENST00000469713 RNPEPQ9H4A4 650 aa5.05□□□□□ -1.6
VPS8-220ENST00000469713 ETAA1Q9NY74 926 aa5.05□□□□□ -1.6
VPS8-220ENST00000469713 TRPM5Q9NZQ8 1165 aa5.05□□□□□ -1.6
VPS8-220ENST00000469713 DMTF1Q9Y222 760 aa5.05□□□□□ -1.6
VPS8-220ENST00000469713 TMX2Q9Y320 296 aa5.05□□□□□ -1.6
VPS8-220ENST00000469713 AHRRA9YTQ3 701 aa5.04□□□□□ -1.6
VPS8-220ENST00000469713 DIRC3C9JPN6 131 aa5.04□□□□□ -1.6
VPS8-220ENST00000469713 TRIM24O15164 1050 aa5.04□□□□□ -1.6
VPS8-220ENST00000469713 TPD52L2O43399 206 aaKnown RBP5.04□□□□□ -1.6
VPS8-220ENST00000469713 RPS6KA4O75676 772 aa5.04□□□□□ -1.6
VPS8-220ENST00000469713 PARP1P09874 1014 aaKnown RBP5.04□□□□□ -1.6
VPS8-220ENST00000469713 CHRM3P20309 590 aa5.04□□□□□ -1.6
VPS8-220ENST00000469713 POU6F2P78424 691 aaPredicted RBP5.04□□□□□ -1.6
VPS8-220ENST00000469713 HTRA4P83105 476 aaPredicted RBP5.04□□□□□ -1.6
VPS8-220ENST00000469713 OCA2Q04671 838 aa5.04□□□□□ -1.6
VPS8-220ENST00000469713 PIGFQ07326 219 aa5.04□□□□□ -1.6
VPS8-220ENST00000469713 ZNF844Q08AG5 666 aa5.04□□□□□ -1.6
VPS8-220ENST00000469713 RAB32Q13637 225 aa5.04□□□□□ -1.6
VPS8-220ENST00000469713 TOB2Q14106 344 aaPredicted RBP5.04□□□□□ -1.6
VPS8-220ENST00000469713 BOP1Q14137 746 aaKnown RBP5.04□□□□□ -1.6
VPS8-220ENST00000469713 R3HDM1Q15032 1099 aaKnown RBP5.04□□□□□ -1.6
VPS8-220ENST00000469713 PRKD1Q15139 912 aaPredicted RBP5.04□□□□□ -1.6
VPS8-220ENST00000469713 SLC44A4Q53GD3 710 aa5.04□□□□□ -1.6
VPS8-220ENST00000469713 FAM209BQ5JX69 171 aa5.04□□□□□ -1.6
VPS8-220ENST00000469713 C10orf62Q5T681 223 aaPredicted RBP5.04□□□□□ -1.6
VPS8-220ENST00000469713 DCAF12L1Q5VU92 463 aa5.04□□□□□ -1.6
VPS8-220ENST00000469713 SLC30A10Q6XR72 485 aa5.04□□□□□ -1.6
VPS8-220ENST00000469713 GDF7Q7Z4P5 450 aa5.04□□□□□ -1.6
VPS8-220ENST00000469713 PALM2Q8IXS6 379 aa5.04□□□□□ -1.6
VPS8-220ENST00000469713 TTC9BQ8N6N2 239 aa5.04□□□□□ -1.6
VPS8-220ENST00000469713 RNF152Q8N8N0 203 aa5.04□□□□□ -1.6
VPS8-220ENST00000469713 OR56A3Q8NH54 315 aa5.04□□□□□ -1.6
VPS8-220ENST00000469713 LRIG1Q96JA1 1093 aa5.04□□□□□ -1.6
VPS8-220ENST00000469713 SMOQ99835 787 aa5.04□□□□□ -1.6
VPS8-220ENST00000469713 SPATA5L1Q9BVQ7 753 aa5.04□□□□□ -1.6
VPS8-220ENST00000469713 KRTAP9-3Q9BYQ3 159 aa5.04□□□□□ -1.6
VPS8-220ENST00000469713 ZNF768Q9H5H4 540 aaKnown RBP5.04□□□□□ -1.6
VPS8-220ENST00000469713 STARD7Q9NQZ5 370 aa5.04□□□□□ -1.6
VPS8-220ENST00000469713 XPR1Q9UBH6 696 aa5.04□□□□□ -1.6
VPS8-220ENST00000469713 HESX1Q9UBX0 185 aa5.04□□□□□ -1.6
VPS8-220ENST00000469713 ARID4BQ4LE39 1312 aaPredicted RBP5.03□□□□□ -1.6
VPS8-220ENST00000469713 PYCARD-AS1I3L0S3 204 aa5.03□□□□□ -1.6
VPS8-220ENST00000469713 MYO1CO00159 1063 aa5.03□□□□□ -1.6
VPS8-220ENST00000469713 MUSKO15146 869 aa5.03□□□□□ -1.6
VPS8-220ENST00000469713 FAM20BO75063 409 aa5.03□□□□□ -1.6
VPS8-220ENST00000469713 ELANEP08246 267 aa5.03□□□□□ -1.6
VPS8-220ENST00000469713 TOB1P50616 345 aaPredicted RBP5.03□□□□□ -1.6
VPS8-220ENST00000469713 FAM189BP81408 668 aa5.03□□□□□ -1.6
VPS8-220ENST00000469713 MXRA7P84157 204 aa5.03□□□□□ -1.6
VPS8-220ENST00000469713 AMOTQ4VCS5 1084 aa5.03□□□□□ -1.6
VPS8-220ENST00000469713 RABL3Q5HYI8 236 aa5.03□□□□□ -1.6
VPS8-220ENST00000469713 LRRC55Q6ZSA7 311 aa5.03□□□□□ -1.6
VPS8-220ENST00000469713 TMPRSS6Q8IU80 811 aa5.03□□□□□ -1.6
VPS8-220ENST00000469713 MAPKAPK5Q8IW41 473 aa5.03□□□□□ -1.6
VPS8-220ENST00000469713 PSD4Q8NDX1 1056 aa5.03□□□□□ -1.6
VPS8-220ENST00000469713 ACRBPQ8NEB7 543 aa5.03□□□□□ -1.6
VPS8-220ENST00000469713 VPS37AQ8NEZ2 397 aa5.03□□□□□ -1.6
VPS8-220ENST00000469713 DEPTORQ8TB45 409 aa5.03□□□□□ -1.6
VPS8-220ENST00000469713 ZNF483Q8TF39 744 aaPredicted RBP5.03□□□□□ -1.6
VPS8-220ENST00000469713 KIAA1191Q96A73 305 aa5.03□□□□□ -1.6
VPS8-220ENST00000469713 TRIB1Q96RU8 372 aa5.03□□□□□ -1.6
VPS8-220ENST00000469713 PSMD1Q99460 953 aa5.03□□□□□ -1.6
VPS8-220ENST00000469713 ARPC5LQ9BPX5 153 aa5.03□□□□□ -1.6
VPS8-220ENST00000469713 BRIP1Q9BX63 1249 aa5.03□□□□□ -1.6
VPS8-220ENST00000469713 MS4A7Q9GZW8 240 aaPredicted RBP5.03□□□□□ -1.6
VPS8-220ENST00000469713 CERS4Q9HA82 394 aa5.03□□□□□ -1.6
VPS8-220ENST00000469713 A1CFQ9NQ94 594 aaKnown RBP5.03□□□□□ -1.6
VPS8-220ENST00000469713 SMPD4Q9NXE4 827 aa5.03□□□□□ -1.6
VPS8-220ENST00000469713 GPRC5BQ9NZH0 403 aa5.03□□□□□ -1.6
VPS8-220ENST00000469713 CTTNBP2NLQ9P2B4 639 aa5.03□□□□□ -1.6
VPS8-220ENST00000469713 RAPGEFL1Q9UHV5 662 aa5.03□□□□□ -1.6
VPS8-220ENST00000469713 CNOT11Q9UKZ1 510 aaKnown RBP5.03□□□□□ -1.6
VPS8-220ENST00000469713 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.02□□□□□ -1.61
VPS8-220ENST00000469713 CCDC195A0A1B0GUA6 201 aa5.02□□□□□ -1.61
VPS8-220ENST00000469713 ABHD14A-ACY1A0A1B0GW23 586 aa5.02□□□□□ -1.61
VPS8-220ENST00000469713 MBD3L4A6NDZ8 208 aaPredicted RBP5.02□□□□□ -1.61
VPS8-220ENST00000469713 MBD3L3A6NE82 208 aaPredicted RBP5.02□□□□□ -1.61
VPS8-220ENST00000469713 APOL1O14791 398 aa5.02□□□□□ -1.61
VPS8-220ENST00000469713 DCLK1O15075 740 aa5.02□□□□□ -1.61
VPS8-220ENST00000469713 ERN1O75460 977 aaKnown RBP5.02□□□□□ -1.61
VPS8-220ENST00000469713 RECQL4O94761 1208 aa5.02□□□□□ -1.61
VPS8-220ENST00000469713 GPANK1O95872 356 aa5.02□□□□□ -1.61
VPS8-220ENST00000469713 SPATA31D3P0C874 917 aa5.02□□□□□ -1.61
VPS8-220ENST00000469713 SETSIPP0DME0 302 aa5.02□□□□□ -1.61
VPS8-220ENST00000469713 IL1R1P14778 569 aa5.02□□□□□ -1.61
VPS8-220ENST00000469713 KLRC1P26715 233 aa5.02□□□□□ -1.61
VPS8-220ENST00000469713 MC2RQ01718 297 aa5.02□□□□□ -1.61
VPS8-220ENST00000469713 PMS2P11Q13670 270 aa5.02□□□□□ -1.61
VPS8-220ENST00000469713 IZUMO3Q5VZ72 239 aa5.02□□□□□ -1.61
VPS8-220ENST00000469713 ERICH6BQ5W0A0 696 aa5.02□□□□□ -1.61
VPS8-220ENST00000469713 HIBCHQ6NVY1 386 aaPredicted RBP5.02□□□□□ -1.61
VPS8-220ENST00000469713 TAF2Q6P1X5 1199 aa5.02□□□□□ -1.61
VPS8-220ENST00000469713 C1orf228Q6PIY5 440 aa5.02□□□□□ -1.61
VPS8-220ENST00000469713 FOXR2Q6PJQ5 311 aa5.02□□□□□ -1.61
VPS8-220ENST00000469713 SPATA31D4Q6ZUB0 917 aa5.02□□□□□ -1.61
VPS8-220ENST00000469713 UNC13DQ70J99 1090 aa5.02□□□□□ -1.61
VPS8-220ENST00000469713 Q8NA96 180 aa5.02□□□□□ -1.61
VPS8-220ENST00000469713 SNX22Q96L94 193 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms