RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 FFAR3O14843 346 aa7.25□□□□□ -1.25
PTCD3-208ENST00000469585 GH2P01242 217 aa7.25□□□□□ -1.25
PTCD3-208ENST00000469585 RPL13P26373 211 aaKnown RBP7.25□□□□□ -1.25
PTCD3-208ENST00000469585 APEX1P27695 318 aaKnown RBP7.25□□□□□ -1.25
PTCD3-208ENST00000469585 LBX1P52954 281 aa7.25□□□□□ -1.25
PTCD3-208ENST00000469585 MANFP55145 182 aaKnown RBP7.25□□□□□ -1.25
PTCD3-208ENST00000469585 ICA1Q05084 483 aa7.25□□□□□ -1.25
PTCD3-208ENST00000469585 ADCY2Q08462 1091 aa7.25□□□□□ -1.25
PTCD3-208ENST00000469585 SPP2Q13103 211 aa7.25□□□□□ -1.25
PTCD3-208ENST00000469585 IKQ13123 557 aaPredicted RBP7.25□□□□□ -1.25
PTCD3-208ENST00000469585 PKN2Q16513 984 aaKnown RBP7.25□□□□□ -1.25
PTCD3-208ENST00000469585 PLEKHG6Q3KR16 790 aa7.25□□□□□ -1.25
PTCD3-208ENST00000469585 SBK1Q52WX2 424 aa7.25□□□□□ -1.25
PTCD3-208ENST00000469585 CCDC178Q5BJE1 867 aa7.25□□□□□ -1.25
PTCD3-208ENST00000469585 KIAA1841Q6NSI8 718 aa7.25□□□□□ -1.25
PTCD3-208ENST00000469585 TIGD7Q6NT04 549 aaPredicted RBP7.25□□□□□ -1.25
PTCD3-208ENST00000469585 ANKRD23Q86SG2 305 aa7.25□□□□□ -1.25
PTCD3-208ENST00000469585 ZFPM1Q8IX07 1006 aa7.25□□□□□ -1.25
PTCD3-208ENST00000469585 OTUD7AQ8TE49 926 aaPredicted RBP7.25□□□□□ -1.25
PTCD3-208ENST00000469585 ZNF384Q8TF68 577 aa7.25□□□□□ -1.25
PTCD3-208ENST00000469585 MTMR8Q96EF0 704 aa7.25□□□□□ -1.25
PTCD3-208ENST00000469585 RNF186Q9NXI6 227 aa7.25□□□□□ -1.25
PTCD3-208ENST00000469585 ZBTB21Q9ULJ3 1066 aa7.25□□□□□ -1.25
PTCD3-208ENST00000469585 NAV1Q8NEY1 1877 aa7.25□□□□□ -1.25
PTCD3-208ENST00000469585 MYH1P12882 1939 aa7.25□□□□□ -1.25
PTCD3-208ENST00000469585 PDHXO00330 501 aa7.24□□□□□ -1.25
PTCD3-208ENST00000469585 FOXN1O15353 648 aa7.24□□□□□ -1.25
PTCD3-208ENST00000469585 RANBP6O60518 1105 aaKnown RBP7.24□□□□□ -1.25
PTCD3-208ENST00000469585 SCAND1P57086 179 aa7.24□□□□□ -1.25
PTCD3-208ENST00000469585 CCNA1P78396 465 aa7.24□□□□□ -1.25
PTCD3-208ENST00000469585 CD83Q01151 205 aa7.24□□□□□ -1.25
PTCD3-208ENST00000469585 KLF1Q13351 362 aaPredicted RBP7.24□□□□□ -1.25
PTCD3-208ENST00000469585 NOLC1Q14978 699 aaKnown RBP eCLIP7.24□□□□□ -1.25
PTCD3-208ENST00000469585 ZNF124Q15973 351 aa7.24□□□□□ -1.25
PTCD3-208ENST00000469585 C12orf60Q5U649 245 aa7.24□□□□□ -1.25
PTCD3-208ENST00000469585 CTR9Q6PD62 1173 aa7.24□□□□□ -1.25
PTCD3-208ENST00000469585 MFSD6Q6ZSS7 791 aa7.24□□□□□ -1.25
PTCD3-208ENST00000469585 RALYLQ86SE5 291 aaKnown RBP7.24□□□□□ -1.25
PTCD3-208ENST00000469585 IQCA1Q86XH1 822 aa7.24□□□□□ -1.25
PTCD3-208ENST00000469585 LPAR1Q92633 364 aa7.24□□□□□ -1.25
PTCD3-208ENST00000469585 ESR2Q92731 530 aa7.24□□□□□ -1.25
PTCD3-208ENST00000469585 ACAP3Q96P50 834 aa7.24□□□□□ -1.25
PTCD3-208ENST00000469585 KRTAP4-8Q9BYQ9 185 aa7.24□□□□□ -1.25
PTCD3-208ENST00000469585 IRF2BPLQ9H1B7 796 aa7.24□□□□□ -1.25
PTCD3-208ENST00000469585 AGTPBP1Q9UPW5 1226 aa7.24□□□□□ -1.25
PTCD3-208ENST00000469585 SLC45A1Q9Y2W3 748 aa7.24□□□□□ -1.25
PTCD3-208ENST00000469585 SSC5DA1L4H1 1573 aa7.24□□□□□ -1.25
PTCD3-208ENST00000469585 A0A0G2JLL6 359 aaPredicted RBP7.23□□□□□ -1.25
PTCD3-208ENST00000469585 PRSS38A1L453 326 aa7.23□□□□□ -1.25
PTCD3-208ENST00000469585 GOLGA8AA7E2F4 631 aa7.23□□□□□ -1.25
PTCD3-208ENST00000469585 GOLGA8BA8MQT2 603 aa7.23□□□□□ -1.25
PTCD3-208ENST00000469585 PRKAB2O43741 272 aa7.23□□□□□ -1.25
PTCD3-208ENST00000469585 APOL3O95236 402 aa7.23□□□□□ -1.25
PTCD3-208ENST00000469585 MCCP23508 829 aa7.23□□□□□ -1.25
PTCD3-208ENST00000469585 GPR3P46089 330 aa7.23□□□□□ -1.25
PTCD3-208ENST00000469585 GCLCP48506 637 aaPredicted RBP7.23□□□□□ -1.25
PTCD3-208ENST00000469585 AFF3P51826 1226 aaKnown RBP7.23□□□□□ -1.25
PTCD3-208ENST00000469585 HMGCS2P54868 508 aa7.23□□□□□ -1.25
PTCD3-208ENST00000469585 BACE1P56817 501 aa7.23□□□□□ -1.25
PTCD3-208ENST00000469585 BCAR1P56945 870 aa7.23□□□□□ -1.25
PTCD3-208ENST00000469585 SP3Q02447 781 aa7.23□□□□□ -1.25
PTCD3-208ENST00000469585 PPARAQ07869 468 aa7.23□□□□□ -1.25
PTCD3-208ENST00000469585 FSCN1Q16658 493 aaKnown RBP7.23□□□□□ -1.25
PTCD3-208ENST00000469585 RRP12Q5JTH9 1297 aaKnown RBP7.23□□□□□ -1.25
PTCD3-208ENST00000469585 TATDN1Q6P1N9 297 aa7.23□□□□□ -1.25
PTCD3-208ENST00000469585 PRRT2Q7Z6L0 340 aaPredicted RBP7.23□□□□□ -1.25
PTCD3-208ENST00000469585 UBAC1Q9BSL1 405 aa7.23□□□□□ -1.25
PTCD3-208ENST00000469585 ANO3Q9BYT9 981 aa7.23□□□□□ -1.25
PTCD3-208ENST00000469585 KRT23Q9C075 422 aa7.23□□□□□ -1.25
PTCD3-208ENST00000469585 PITHD1Q9GZP4 211 aaPredicted RBP7.23□□□□□ -1.25
PTCD3-208ENST00000469585 WNT8AQ9H1J5 351 aa7.23□□□□□ -1.25
PTCD3-208ENST00000469585 NTMQ9P121 344 aa7.23□□□□□ -1.25
PTCD3-208ENST00000469585 TMPRSS11EQ9UL52 423 aa7.23□□□□□ -1.25
PTCD3-208ENST00000469585 AFG3L2Q9Y4W6 797 aa7.23□□□□□ -1.25
PTCD3-208ENST00000469585 DOCK1Q14185 1865 aa7.23□□□□□ -1.25
PTCD3-208ENST00000469585 SALL3Q9BXA9 1300 aa7.23□□□□□ -1.25
PTCD3-208ENST00000469585 FOCADQ5VW36 1801 aa7.22□□□□□ -1.25
PTCD3-208ENST00000469585 BTBD19C9JJ37 291 aa7.22□□□□□ -1.25
PTCD3-208ENST00000469585 H0Y858 1186 aa7.22□□□□□ -1.25
PTCD3-208ENST00000469585 TLR2O60603 784 aa7.22□□□□□ -1.25
PTCD3-208ENST00000469585 KLHL18O94889 574 aa7.22□□□□□ -1.25
PTCD3-208ENST00000469585 REC8O95072 547 aa7.22□□□□□ -1.25
PTCD3-208ENST00000469585 TTLL1O95922 423 aa7.22□□□□□ -1.25
PTCD3-208ENST00000469585 C8AP07357 584 aa7.22□□□□□ -1.25
PTCD3-208ENST00000469585 PFKMP08237 780 aa7.22□□□□□ -1.25
PTCD3-208ENST00000469585 CLEC2LP0C7M8 214 aa7.22□□□□□ -1.25
PTCD3-208ENST00000469585 HSPD1P10809 573 aaKnown RBP7.22□□□□□ -1.25
PTCD3-208ENST00000469585 HSPA8P11142 646 aaKnown RBP7.22□□□□□ -1.25
PTCD3-208ENST00000469585 ZKSCAN1P17029 563 aaPredicted RBP7.22□□□□□ -1.25
PTCD3-208ENST00000469585 PLCD1P51178 756 aa7.22□□□□□ -1.25
PTCD3-208ENST00000469585 NFATC3Q12968 1075 aa7.22□□□□□ -1.25
PTCD3-208ENST00000469585 CRHR2Q13324 411 aa7.22□□□□□ -1.25
PTCD3-208ENST00000469585 ALX1Q15699 326 aa7.22□□□□□ -1.25
PTCD3-208ENST00000469585 PKN1Q16512 942 aa7.22□□□□□ -1.25
PTCD3-208ENST00000469585 CT83Q5H943 113 aa7.22□□□□□ -1.25
PTCD3-208ENST00000469585 BMP2KLQ5H9B9 411 aa7.22□□□□□ -1.25
PTCD3-208ENST00000469585 TMEM200BQ69YZ2 307 aa7.22□□□□□ -1.25
PTCD3-208ENST00000469585 TRMT10BQ6PF06 316 aaKnown RBP7.22□□□□□ -1.25
PTCD3-208ENST00000469585 CTU1Q7Z7A3 348 aaKnown RBP7.22□□□□□ -1.25
PTCD3-208ENST00000469585 LYSMD2Q8IV50 215 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms