RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 PRAMEF12O95522 483 aa13.29□□□□□ -0.28
HDAC3-204ENST00000469207 PIGRP01833 764 aa13.29□□□□□ -0.28
HDAC3-204ENST00000469207 KRT18P05783 430 aaKnown RBP13.29□□□□□ -0.28
HDAC3-204ENST00000469207 ATF6P18850 670 aa13.29□□□□□ -0.28
HDAC3-204ENST00000469207 PLCG1P19174 1290 aa13.29□□□□□ -0.28
HDAC3-204ENST00000469207 UBA7P41226 1012 aa13.29□□□□□ -0.28
HDAC3-204ENST00000469207 CCR3P51677 355 aa13.29□□□□□ -0.28
HDAC3-204ENST00000469207 ZNF131P52739 623 aa13.29□□□□□ -0.28
HDAC3-204ENST00000469207 MYBPC2Q14324 1141 aa13.29□□□□□ -0.28
HDAC3-204ENST00000469207 MGAT5BQ3V5L5 792 aa13.29□□□□□ -0.28
HDAC3-204ENST00000469207 ERICH6BQ5W0A0 696 aa13.29□□□□□ -0.28
HDAC3-204ENST00000469207 ARL6IP4Q66PJ3 421 aaKnown RBP13.29□□□□□ -0.28
HDAC3-204ENST00000469207 USP49Q70CQ1 688 aa13.29□□□□□ -0.28
HDAC3-204ENST00000469207 ZSWIM2Q8NEG5 633 aa13.29□□□□□ -0.28
HDAC3-204ENST00000469207 FAM200AQ8TCP9 573 aa13.29□□□□□ -0.28
HDAC3-204ENST00000469207 SECISBP2LQ93073 1101 aaKnown RBP13.29□□□□□ -0.28
HDAC3-204ENST00000469207 FAM84AQ96KN4 292 aa13.29□□□□□ -0.28
HDAC3-204ENST00000469207 CNTNAP3BQ96NU0 1288 aa13.29□□□□□ -0.28
HDAC3-204ENST00000469207 SLC46A2Q9BY10 475 aa13.29□□□□□ -0.28
HDAC3-204ENST00000469207 FAM126AQ9BYI3 521 aaPredicted RBP13.29□□□□□ -0.28
HDAC3-204ENST00000469207 CNTNAP3Q9BZ76 1288 aa13.29□□□□□ -0.28
HDAC3-204ENST00000469207 IL21Q9HBE4 155 aa13.29□□□□□ -0.28
HDAC3-204ENST00000469207 PARVGQ9HBI0 331 aa13.29□□□□□ -0.28
HDAC3-204ENST00000469207 POLR3BQ9NW08 1133 aaPredicted RBP13.29□□□□□ -0.28
HDAC3-204ENST00000469207 ODF2LQ9ULJ1 636 aa13.29□□□□□ -0.28
HDAC3-204ENST00000469207 NCOR2Q9Y618 2525 aa13.28□□□□□ -0.28
HDAC3-204ENST00000469207 MYBPHLA2RUH7 354 aa13.28□□□□□ -0.28
HDAC3-204ENST00000469207 H0YCG3 227 aa13.28□□□□□ -0.28
HDAC3-204ENST00000469207 DPYSL4O14531 572 aa13.28□□□□□ -0.28
HDAC3-204ENST00000469207 CYB561D2O14569 222 aa13.28□□□□□ -0.28
HDAC3-204ENST00000469207 XPOTO43592 962 aaKnown RBP13.28□□□□□ -0.28
HDAC3-204ENST00000469207 GDF9O60383 454 aa13.28□□□□□ -0.28
HDAC3-204ENST00000469207 ODC1P11926 461 aa13.28□□□□□ -0.28
HDAC3-204ENST00000469207 PXNP49023 591 aaPredicted RBP13.28□□□□□ -0.28
HDAC3-204ENST00000469207 NRLP54845 237 aa13.28□□□□□ -0.28
HDAC3-204ENST00000469207 WNT7BP56706 349 aa13.28□□□□□ -0.28
HDAC3-204ENST00000469207 GTF2BQ00403 316 aa13.28□□□□□ -0.28
HDAC3-204ENST00000469207 KCNA1Q09470 495 aa13.28□□□□□ -0.28
HDAC3-204ENST00000469207 PLD1Q13393 1074 aa13.28□□□□□ -0.28
HDAC3-204ENST00000469207 SIM2Q14190 667 aaPredicted RBP13.28□□□□□ -0.28
HDAC3-204ENST00000469207 TMEM132DQ14C87 1099 aa13.28□□□□□ -0.28
HDAC3-204ENST00000469207 SDHAF4Q5VUM1 108 aa13.28□□□□□ -0.28
HDAC3-204ENST00000469207 WSCD1Q658N2 575 aa13.28□□□□□ -0.28
HDAC3-204ENST00000469207 ADALQ6DHV7 355 aa13.28□□□□□ -0.28
HDAC3-204ENST00000469207 PKN3Q6P5Z2 889 aa13.28□□□□□ -0.28
HDAC3-204ENST00000469207 CRELD2Q6UXH1 353 aaPredicted RBP13.28□□□□□ -0.28
HDAC3-204ENST00000469207 SPEM1Q8N4L4 309 aa13.28□□□□□ -0.28
HDAC3-204ENST00000469207 KCTD17Q8N5Z5 321 aa13.28□□□□□ -0.28
HDAC3-204ENST00000469207 CELF5Q8N6W0 485 aaKnown RBP13.28□□□□□ -0.28
HDAC3-204ENST00000469207 RAD54LQ92698 747 aa13.28□□□□□ -0.28
HDAC3-204ENST00000469207 E2F7Q96AV8 911 aa13.28□□□□□ -0.28
HDAC3-204ENST00000469207 CALML4Q96GE6 196 aa13.28□□□□□ -0.28
HDAC3-204ENST00000469207 PYM1Q9BRP8 204 aaKnown RBP13.28□□□□□ -0.28
HDAC3-204ENST00000469207 OXCT2Q9BYC2 517 aaPredicted RBP13.28□□□□□ -0.28
HDAC3-204ENST00000469207 ZCWPW1Q9H0M4 648 aa13.28□□□□□ -0.28
HDAC3-204ENST00000469207 TMLHEQ9NVH6 421 aa13.28□□□□□ -0.28
HDAC3-204ENST00000469207 GMEB2Q9UKD1 530 aa13.28□□□□□ -0.28
HDAC3-204ENST00000469207 SCN1AP35498 2009 aa13.28□□□□□ -0.28
HDAC3-204ENST00000469207 OTOL1A6NHN0 477 aaPredicted RBP13.27□□□□□ -0.29
HDAC3-204ENST00000469207 ADSSP30520 456 aa13.27□□□□□ -0.29
HDAC3-204ENST00000469207 CTHP32929 405 aa13.27□□□□□ -0.29
HDAC3-204ENST00000469207 GPR15P49685 360 aa13.27□□□□□ -0.29
HDAC3-204ENST00000469207 MLLT6P55198 1093 aaPredicted RBP13.27□□□□□ -0.29
HDAC3-204ENST00000469207 RABEP1Q15276 862 aa13.27□□□□□ -0.29
HDAC3-204ENST00000469207 SF3A1Q15459 793 aaKnown RBP13.27□□□□□ -0.29
HDAC3-204ENST00000469207 LARP1BQ659C4 914 aaKnown RBP13.27□□□□□ -0.29
HDAC3-204ENST00000469207 TRIM68Q6AZZ1 485 aa13.27□□□□□ -0.29
HDAC3-204ENST00000469207 DYMQ7RTS9 669 aa13.27□□□□□ -0.29
HDAC3-204ENST00000469207 GPR161Q8N6U8 529 aaKnown RBP13.27□□□□□ -0.29
HDAC3-204ENST00000469207 KCNN1Q92952 543 aa13.27□□□□□ -0.29
HDAC3-204ENST00000469207 EPSTI1Q96J88 318 aa13.27□□□□□ -0.29
HDAC3-204ENST00000469207 AK8Q96MA6 479 aa13.27□□□□□ -0.29
HDAC3-204ENST00000469207 C8orf33Q9H7E9 229 aaPredicted RBP13.27□□□□□ -0.29
HDAC3-204ENST00000469207 GKN1Q9NS71 199 aa13.27□□□□□ -0.29
HDAC3-204ENST00000469207 DPP3Q9NY33 737 aa13.27□□□□□ -0.29
HDAC3-204ENST00000469207 TBC1D7Q9P0N9 293 aa13.27□□□□□ -0.29
HDAC3-204ENST00000469207 CDV3Q9UKY7 258 aaKnown RBP13.27□□□□□ -0.29
HDAC3-204ENST00000469207 RAB23Q9ULC3 237 aa13.27□□□□□ -0.29
HDAC3-204ENST00000469207 CCL26Q9Y258 94 aa13.27□□□□□ -0.29
HDAC3-204ENST00000469207 ASB3Q9Y575 518 aa13.27□□□□□ -0.29
HDAC3-204ENST00000469207 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.26□□□□□ -0.29
HDAC3-204ENST00000469207 PRR5-ARHGAP8B1AHC4 643 aa13.26□□□□□ -0.29
HDAC3-204ENST00000469207 SPTBN2O15020 2390 aa13.26□□□□□ -0.29
HDAC3-204ENST00000469207 EXTL3O43909 919 aa13.26□□□□□ -0.29
HDAC3-204ENST00000469207 CYP11A1P05108 521 aa13.26□□□□□ -0.29
HDAC3-204ENST00000469207 DDIT3P35638 169 aa13.26□□□□□ -0.29
HDAC3-204ENST00000469207 ARHGAP8P85298 464 aa13.26□□□□□ -0.29
HDAC3-204ENST00000469207 LMNB2Q03252 620 aa13.26□□□□□ -0.29
HDAC3-204ENST00000469207 PPP2R5DQ14738 602 aa13.26□□□□□ -0.29
HDAC3-204ENST00000469207 CCDC6Q16204 474 aa13.26□□□□□ -0.29
HDAC3-204ENST00000469207 KYAT1Q16773 422 aa13.26□□□□□ -0.29
HDAC3-204ENST00000469207 ARHGAP29Q52LW3 1261 aa13.26□□□□□ -0.29
HDAC3-204ENST00000469207 LAIR1Q6GTX8 287 aa13.26□□□□□ -0.29
HDAC3-204ENST00000469207 TMEM150AQ86TG1 271 aa13.26□□□□□ -0.29
HDAC3-204ENST00000469207 RALGPS2Q86X27 583 aaPredicted RBP13.26□□□□□ -0.29
HDAC3-204ENST00000469207 CD302Q8IX05 232 aa13.26□□□□□ -0.29
HDAC3-204ENST00000469207 EFCAB13Q8IY85 973 aa13.26□□□□□ -0.29
HDAC3-204ENST00000469207 MAB21L3Q8N8X9 362 aa13.26□□□□□ -0.29
HDAC3-204ENST00000469207 RASSF8Q8NHQ8 419 aa13.26□□□□□ -0.29
HDAC3-204ENST00000469207 RIN3Q8TB24 985 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms