RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 PPP1R3GB7ZBB8 358 aa15.89■□□□□ 0.13
TMEM39A-205ENST00000468676 RFPL2O75678 378 aa15.89■□□□□ 0.13
TMEM39A-205ENST00000468676 CST3P01034 146 aaPredicted RBP15.89■□□□□ 0.13
TMEM39A-205ENST00000468676 C4BPAP04003 597 aaKnown RBP15.89■□□□□ 0.13
TMEM39A-205ENST00000468676 GTF2H1P32780 548 aa15.89■□□□□ 0.13
TMEM39A-205ENST00000468676 LHX1P48742 406 aa15.89■□□□□ 0.13
TMEM39A-205ENST00000468676 BIRC3Q13489 604 aa15.89■□□□□ 0.13
TMEM39A-205ENST00000468676 ZACNQ401N2 412 aa15.89■□□□□ 0.13
TMEM39A-205ENST00000468676 ZC3H3Q8IXZ2 948 aaKnown RBP15.89■□□□□ 0.13
TMEM39A-205ENST00000468676 GJD3Q8N144 294 aa15.89■□□□□ 0.13
TMEM39A-205ENST00000468676 PDCL2Q8N4E4 241 aa15.89■□□□□ 0.13
TMEM39A-205ENST00000468676 SLC7A14Q8TBB6 771 aa15.89■□□□□ 0.13
TMEM39A-205ENST00000468676 FAM84AQ96KN4 292 aa15.89■□□□□ 0.13
TMEM39A-205ENST00000468676 CEP63Q96MT8 703 aa15.89■□□□□ 0.13
TMEM39A-205ENST00000468676 NUP62CLQ9H1M0 184 aa15.89■□□□□ 0.13
TMEM39A-205ENST00000468676 L1RE1Q9UN81 338 aa15.89■□□□□ 0.13
TMEM39A-205ENST00000468676 C2orf16Q68DN1 1984 aa15.88■□□□□ 0.13
TMEM39A-205ENST00000468676 DLL1O00548 723 aa15.88■□□□□ 0.13
TMEM39A-205ENST00000468676 CD44P16070 742 aaKnown RBP15.88■□□□□ 0.13
TMEM39A-205ENST00000468676 BMP6P22004 513 aa15.88■□□□□ 0.13
TMEM39A-205ENST00000468676 SSTR3P32745 418 aaPredicted RBP15.88■□□□□ 0.13
TMEM39A-205ENST00000468676 MYL7Q01449 175 aa15.88■□□□□ 0.13
TMEM39A-205ENST00000468676 TSPY1Q01534 308 aa15.88■□□□□ 0.13
TMEM39A-205ENST00000468676 ADCY1Q08828 1119 aa15.88■□□□□ 0.13
TMEM39A-205ENST00000468676 NCOA4Q13772 614 aa15.88■□□□□ 0.13
TMEM39A-205ENST00000468676 TDRD10Q5VZ19 366 aaKnown RBP15.88■□□□□ 0.13
TMEM39A-205ENST00000468676 KLHL10Q6JEL2 608 aa15.88■□□□□ 0.13
TMEM39A-205ENST00000468676 LIMS2Q7Z4I7 341 aa15.88■□□□□ 0.13
TMEM39A-205ENST00000468676 DCP1BQ8IZD4 617 aaKnown RBP15.88■□□□□ 0.13
TMEM39A-205ENST00000468676 C2orf15Q8WU43 125 aaKnown RBP15.88■□□□□ 0.13
TMEM39A-205ENST00000468676 NELFBQ8WX92 580 aa15.88■□□□□ 0.13
TMEM39A-205ENST00000468676 TAF4BQ92750 862 aa15.88■□□□□ 0.13
TMEM39A-205ENST00000468676 ZNF707Q96C28 371 aaPredicted RBP15.88■□□□□ 0.13
TMEM39A-205ENST00000468676 ACBD6Q9BR61 282 aa15.88■□□□□ 0.13
TMEM39A-205ENST00000468676 ZCWPW1Q9H0M4 648 aa15.88■□□□□ 0.13
TMEM39A-205ENST00000468676 POMKQ9H5K3 350 aa15.88■□□□□ 0.13
TMEM39A-205ENST00000468676 VRTNQ9H8Y1 702 aa15.88■□□□□ 0.13
TMEM39A-205ENST00000468676 CYP4F11Q9HBI6 524 aa15.88■□□□□ 0.13
TMEM39A-205ENST00000468676 HSFX1Q9UBD0 423 aa15.88■□□□□ 0.13
TMEM39A-205ENST00000468676 USTQ9Y2C2 406 aa15.88■□□□□ 0.13
TMEM39A-205ENST00000468676 TSC2P49815 1807 aa15.88■□□□□ 0.13
TMEM39A-205ENST00000468676 LOC730098B7Z3J9 87 aa15.87■□□□□ 0.13
TMEM39A-205ENST00000468676 TNFRSF10AO00220 468 aa15.87■□□□□ 0.13
TMEM39A-205ENST00000468676 LRG1P02750 347 aa15.87■□□□□ 0.13
TMEM39A-205ENST00000468676 WEE2P0C1S8 567 aa15.87■□□□□ 0.13
TMEM39A-205ENST00000468676 P4HA1P13674 534 aa15.87■□□□□ 0.13
TMEM39A-205ENST00000468676 PCSK1P29120 753 aa15.87■□□□□ 0.13
TMEM39A-205ENST00000468676 PMS1P54277 932 aaKnown RBP15.87■□□□□ 0.13
TMEM39A-205ENST00000468676 MYL6P60660 151 aa15.87■□□□□ 0.13
TMEM39A-205ENST00000468676 TNNC1P63316 161 aa15.87■□□□□ 0.13
TMEM39A-205ENST00000468676 DLG4P78352 724 aa15.87■□□□□ 0.13
TMEM39A-205ENST00000468676 PAK1Q13153 545 aa15.87■□□□□ 0.13
TMEM39A-205ENST00000468676 SOWAHAQ2M3V2 549 aa15.87■□□□□ 0.13
TMEM39A-205ENST00000468676 SGSM1Q2NKQ1 1148 aa15.87■□□□□ 0.13
TMEM39A-205ENST00000468676 WDR72Q3MJ13 1102 aa15.87■□□□□ 0.13
TMEM39A-205ENST00000468676 TTI2Q6NXR4 508 aa15.87■□□□□ 0.13
TMEM39A-205ENST00000468676 RNF19BQ6ZMZ0 732 aa15.87■□□□□ 0.13
TMEM39A-205ENST00000468676 SV2AQ7L0J3 742 aa15.87■□□□□ 0.13
TMEM39A-205ENST00000468676 ADGRF2Q8IZF7 708 aa15.87■□□□□ 0.13
TMEM39A-205ENST00000468676 MLKLQ8NB16 471 aa15.87■□□□□ 0.13
TMEM39A-205ENST00000468676 NECAB3Q96P71 396 aaPredicted RBP15.87■□□□□ 0.13
TMEM39A-205ENST00000468676 MMS19Q96T76 1030 aa15.87■□□□□ 0.13
TMEM39A-205ENST00000468676 RTP3Q9BQQ7 232 aa15.87■□□□□ 0.13
TMEM39A-205ENST00000468676 METTL14Q9HCE5 456 aaKnown RBP15.87■□□□□ 0.13
TMEM39A-205ENST00000468676 WDR6Q9NNW5 1121 aaKnown RBP15.87■□□□□ 0.13
TMEM39A-205ENST00000468676 TRIM49BA6NDI0 452 aa15.86■□□□□ 0.13
TMEM39A-205ENST00000468676 GABRDO14764 452 aa15.86■□□□□ 0.13
TMEM39A-205ENST00000468676 FGFR1OPO95684 399 aaKnown RBP15.86■□□□□ 0.13
TMEM39A-205ENST00000468676 MBD3O95983 291 aa15.86■□□□□ 0.13
TMEM39A-205ENST00000468676 PLD1Q13393 1074 aa15.86■□□□□ 0.13
TMEM39A-205ENST00000468676 NFE2Q16621 373 aaPredicted RBP15.86■□□□□ 0.13
TMEM39A-205ENST00000468676 ZNF699Q32M78 642 aa15.86■□□□□ 0.13
TMEM39A-205ENST00000468676 ZNF667Q5HYK9 610 aa15.86■□□□□ 0.13
TMEM39A-205ENST00000468676 C1orf220Q5T0J3 134 aa15.86■□□□□ 0.13
TMEM39A-205ENST00000468676 SCARA3Q6AZY7 606 aa15.86■□□□□ 0.13
TMEM39A-205ENST00000468676 OTOP3Q7RTS5 596 aa15.86■□□□□ 0.13
TMEM39A-205ENST00000468676 FRMD5Q7Z6J6 570 aa15.86■□□□□ 0.13
TMEM39A-205ENST00000468676 FILIP1Q7Z7B0 1213 aa15.86■□□□□ 0.13
TMEM39A-205ENST00000468676 ELMOD1Q8N336 334 aa15.86■□□□□ 0.13
TMEM39A-205ENST00000468676 PLCD3Q8N3E9 789 aa15.86■□□□□ 0.13
TMEM39A-205ENST00000468676 OR10T2Q8NGX3 314 aa15.86■□□□□ 0.13
TMEM39A-205ENST00000468676 ACSF2Q96CM8 615 aaPredicted RBP15.86■□□□□ 0.13
TMEM39A-205ENST00000468676 EEF2KMTQ96G04 330 aa15.86■□□□□ 0.13
TMEM39A-205ENST00000468676 RPGRIP1Q96KN7 1286 aa15.86■□□□□ 0.13
TMEM39A-205ENST00000468676 IMPG2Q9BZV3 1241 aa15.86■□□□□ 0.13
TMEM39A-205ENST00000468676 XYLT2Q9H1B5 865 aa15.86■□□□□ 0.13
TMEM39A-205ENST00000468676 TMEM8AQ9HCN3 771 aa15.86■□□□□ 0.13
TMEM39A-205ENST00000468676 DDX43Q9NXZ2 648 aaKnown RBP15.86■□□□□ 0.13
TMEM39A-205ENST00000468676 ARMCX3Q9UH62 379 aaPredicted RBP15.86■□□□□ 0.13
TMEM39A-205ENST00000468676 INSL5Q9Y5Q6 135 aa15.86■□□□□ 0.13
TMEM39A-205ENST00000468676 CCL16O15467 120 aa15.85■□□□□ 0.13
TMEM39A-205ENST00000468676 TACC1O75410 805 aa15.85■□□□□ 0.13
TMEM39A-205ENST00000468676 SEC24AO95486 1093 aa15.85■□□□□ 0.13
TMEM39A-205ENST00000468676 VNN1O95497 513 aa15.85■□□□□ 0.13
TMEM39A-205ENST00000468676 GNA14O95837 355 aa15.85■□□□□ 0.13
TMEM39A-205ENST00000468676 OR4Q2P0C623 313 aa15.85■□□□□ 0.13
TMEM39A-205ENST00000468676 WARSP23381 471 aaKnown RBP15.85■□□□□ 0.13
TMEM39A-205ENST00000468676 GCLMP48507 274 aa15.85■□□□□ 0.13
TMEM39A-205ENST00000468676 TUFMP49411 452 aaKnown RBP15.85■□□□□ 0.13
TMEM39A-205ENST00000468676 SLC39A12Q504Y0 691 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms