RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 LMNB2Q03252 620 aa16.7■□□□□ 0.26
TSPAN4-211ENST00000468468 MIS18BP1Q6P0N0 1132 aa16.7■□□□□ 0.26
TSPAN4-211ENST00000468468 CRELD2Q6UXH1 353 aaPredicted RBP16.7■□□□□ 0.26
TSPAN4-211ENST00000468468 KIF2BQ8N4N8 673 aa16.7■□□□□ 0.26
TSPAN4-211ENST00000468468 GLIS1Q8NBF1 620 aa16.7■□□□□ 0.26
TSPAN4-211ENST00000468468 MAML1Q92585 1016 aa16.7■□□□□ 0.26
TSPAN4-211ENST00000468468 ZBTB45Q96K62 511 aaPredicted RBP16.7■□□□□ 0.26
TSPAN4-211ENST00000468468 CFAP57Q96MR6 1250 aa16.7■□□□□ 0.26
TSPAN4-211ENST00000468468 FHDC1Q9C0D6 1143 aaPredicted RBP16.7■□□□□ 0.26
TSPAN4-211ENST00000468468 AFG3L2Q9Y4W6 797 aa16.7■□□□□ 0.26
TSPAN4-211ENST00000468468 EXOC1LA0A1B0GW35 172 aa16.69■□□□□ 0.26
TSPAN4-211ENST00000468468 RGS20O76081 388 aa16.69■□□□□ 0.26
TSPAN4-211ENST00000468468 DDNO94850 711 aaPredicted RBP16.69■□□□□ 0.26
TSPAN4-211ENST00000468468 MTFR1Q15390 333 aa16.69■□□□□ 0.26
TSPAN4-211ENST00000468468 CEP128Q6ZU80 1094 aa16.69■□□□□ 0.26
TSPAN4-211ENST00000468468 CNKSR2Q8WXI2 1034 aa16.69■□□□□ 0.26
TSPAN4-211ENST00000468468 FOXP3Q9BZS1 431 aa16.69■□□□□ 0.26
TSPAN4-211ENST00000468468 HAPLN2Q9GZV7 340 aa16.69■□□□□ 0.26
TSPAN4-211ENST00000468468 JPH1Q9HDC5 661 aaPredicted RBP16.69■□□□□ 0.26
TSPAN4-211ENST00000468468 PARVAQ9NVD7 372 aa16.69■□□□□ 0.26
TSPAN4-211ENST00000468468 RBAKQ9NYW8 714 aaPredicted RBP16.69■□□□□ 0.26
TSPAN4-211ENST00000468468 DNPEPQ9ULA0 475 aa16.69■□□□□ 0.26
TSPAN4-211ENST00000468468 ZNF148Q9UQR1 794 aa16.69■□□□□ 0.26
TSPAN4-211ENST00000468468 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.69■□□□□ 0.26
TSPAN4-211ENST00000468468 FAM47DPA6NHR8 397 aa16.69■□□□□ 0.26
TSPAN4-211ENST00000468468 SPDYE16A6NNV3 312 aaPredicted RBP16.69■□□□□ 0.26
TSPAN4-211ENST00000468468 LIASO43766 372 aa16.69■□□□□ 0.26
TSPAN4-211ENST00000468468 ABHD2P08910 425 aa16.69■□□□□ 0.26
TSPAN4-211ENST00000468468 ZSCAN5DPP0CG00 497 aa16.69■□□□□ 0.26
TSPAN4-211ENST00000468468 ATF7P17544 494 aaPredicted RBP16.69■□□□□ 0.26
TSPAN4-211ENST00000468468 RPL7AP62424 266 aaKnown RBP16.69■□□□□ 0.26
TSPAN4-211ENST00000468468 C1QBPQ07021 282 aaKnown RBP16.69■□□□□ 0.26
TSPAN4-211ENST00000468468 MGAT5Q09328 741 aa16.69■□□□□ 0.26
TSPAN4-211ENST00000468468 FAM47EQ6ZV65 393 aa16.69■□□□□ 0.26
TSPAN4-211ENST00000468468 RCOR2Q8IZ40 523 aa16.69■□□□□ 0.26
TSPAN4-211ENST00000468468 RIBC1Q8N443 379 aaPredicted RBP16.69■□□□□ 0.26
TSPAN4-211ENST00000468468 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.69■□□□□ 0.261e-7■■■□□ 19.2
TSPAN4-211ENST00000468468 TMEM143Q96AN5 459 aa16.69■□□□□ 0.26
TSPAN4-211ENST00000468468 PITPNM3Q9BZ71 974 aa16.69■□□□□ 0.26
TSPAN4-211ENST00000468468 CYP39A1Q9NYL5 469 aa16.69■□□□□ 0.26
TSPAN4-211ENST00000468468 SLC9A2Q9UBY0 812 aa16.69■□□□□ 0.26
TSPAN4-211ENST00000468468 IP6K2Q9UHH9 426 aa16.69■□□□□ 0.26
TSPAN4-211ENST00000468468 DNALI1O14645 258 aaPredicted RBP16.68■□□□□ 0.26
TSPAN4-211ENST00000468468 SPAG7O75391 227 aa16.68■□□□□ 0.26
TSPAN4-211ENST00000468468 USP2O75604 605 aaPredicted RBP16.68■□□□□ 0.26
TSPAN4-211ENST00000468468 TCF4P15884 667 aa16.68■□□□□ 0.26
TSPAN4-211ENST00000468468 WDR4P57081 412 aaKnown RBP16.68■□□□□ 0.26
TSPAN4-211ENST00000468468 ACTR2P61160 394 aa16.68■□□□□ 0.26
TSPAN4-211ENST00000468468 ACCSLQ4AC99 568 aa16.68■□□□□ 0.26
TSPAN4-211ENST00000468468 HP1BP3Q5SSJ5 553 aaPredicted RBP16.68■□□□□ 0.26
TSPAN4-211ENST00000468468 ZBTB41Q5SVQ8 909 aa16.68■□□□□ 0.26
TSPAN4-211ENST00000468468 TEX13BQ9BXU2 312 aa16.68■□□□□ 0.26
TSPAN4-211ENST00000468468 NUB1Q9Y5A7 615 aa16.68■□□□□ 0.26
TSPAN4-211ENST00000468468 POC1B-GALNT4F8VUJ3 575 aa16.68■□□□□ 0.26
TSPAN4-211ENST00000468468 KRT16P08779 473 aa16.68■□□□□ 0.26
TSPAN4-211ENST00000468468 ETS1P14921 441 aa16.68■□□□□ 0.26
TSPAN4-211ENST00000468468 ABCD1P33897 745 aa16.68■□□□□ 0.26
TSPAN4-211ENST00000468468 POLGP54098 1239 aaPredicted RBP16.68■□□□□ 0.26
TSPAN4-211ENST00000468468 OAZ1P54368 228 aa16.68■□□□□ 0.26
TSPAN4-211ENST00000468468 RNF43Q68DV7 783 aa16.68■□□□□ 0.26
TSPAN4-211ENST00000468468 MFSD7Q6UXD7 560 aa16.68■□□□□ 0.26
TSPAN4-211ENST00000468468 NSUN6Q8TEA1 469 aaKnown RBP16.68■□□□□ 0.26
TSPAN4-211ENST00000468468 GRAMD1AQ96CP6 724 aa16.68■□□□□ 0.26
TSPAN4-211ENST00000468468 STAMBPL1Q96FJ0 436 aa16.68■□□□□ 0.26
TSPAN4-211ENST00000468468 RBM41Q96IZ5 413 aaKnown RBP16.68■□□□□ 0.26
TSPAN4-211ENST00000468468 SLITRK1Q96PX8 696 aa16.68■□□□□ 0.26
TSPAN4-211ENST00000468468 STK38LQ9Y2H1 464 aa16.68■□□□□ 0.26
TSPAN4-211ENST00000468468 L3MBTL1Q9Y468 752 aa16.68■□□□□ 0.26
TSPAN4-211ENST00000468468 STYXL1Q9Y6J8 313 aa16.68■□□□□ 0.26
TSPAN4-211ENST00000468468 POLR2AP24928 1970 aaKnown RBP16.68■□□□□ 0.26
TSPAN4-211ENST00000468468 KRT1P04264 644 aa16.67■□□□□ 0.26
TSPAN4-211ENST00000468468 GCAP28676 217 aa16.67■□□□□ 0.26
TSPAN4-211ENST00000468468 ARSEP51690 589 aa16.67■□□□□ 0.26
TSPAN4-211ENST00000468468 NOP14P78316 857 aaKnown RBP16.67■□□□□ 0.26
TSPAN4-211ENST00000468468 EMC2Q15006 297 aa16.67■□□□□ 0.26
TSPAN4-211ENST00000468468 ABHD15Q6UXT9 468 aa16.67■□□□□ 0.26
TSPAN4-211ENST00000468468 TRABD2AQ86V40 505 aa16.67■□□□□ 0.26
TSPAN4-211ENST00000468468 ECHDC2Q86YB7 292 aa16.67■□□□□ 0.26
TSPAN4-211ENST00000468468 CCHCR1Q8TD31 782 aa16.67■□□□□ 0.26
TSPAN4-211ENST00000468468 AGAP11Q8TF27 550 aa16.67■□□□□ 0.26
TSPAN4-211ENST00000468468 ARHGEF3Q9NR81 526 aa16.67■□□□□ 0.26
TSPAN4-211ENST00000468468 ANKFY1Q9P2R3 1169 aa16.67■□□□□ 0.26
TSPAN4-211ENST00000468468 TRIM33Q9UPN9 1127 aa16.67■□□□□ 0.26
TSPAN4-211ENST00000468468 ARID2Q68CP9 1835 aa16.67■□□□□ 0.26
TSPAN4-211ENST00000468468 TJP3O95049 919 aa16.67■□□□□ 0.26
TSPAN4-211ENST00000468468 TBXAS1P24557 533 aaPredicted RBP16.67■□□□□ 0.26
TSPAN4-211ENST00000468468 CCNHP51946 323 aaPredicted RBP16.67■□□□□ 0.26
TSPAN4-211ENST00000468468 VGLL4Q14135 290 aa16.67■□□□□ 0.26
TSPAN4-211ENST00000468468 SUPT20HL1Q3ZLR7 823 aa16.67■□□□□ 0.26
TSPAN4-211ENST00000468468 EAPPQ56P03 285 aaPredicted RBP16.67■□□□□ 0.26
TSPAN4-211ENST00000468468 XKR3Q5GH77 459 aa16.67■□□□□ 0.26
TSPAN4-211ENST00000468468 PRCCQ92733 491 aaPredicted RBP16.67■□□□□ 0.26
TSPAN4-211ENST00000468468 ACAD9Q9H845 621 aa16.67■□□□□ 0.26
TSPAN4-211ENST00000468468 WDR81Q562E7 1941 aa16.67■□□□□ 0.26
TSPAN4-211ENST00000468468 LRRIQ4A6NIV6 560 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 K7ERI5 159 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 RPSAP08865 295 aaKnown RBP16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 PECAM1P16284 738 aaPredicted RBP16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 GPS1Q13098 491 aa16.66■□□□□ 0.26
TSPAN4-211ENST00000468468 NR1H3Q13133 447 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms