RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 TOX2Q96NM4 488 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 MRI1Q9BV20 369 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 KRTAP4-2Q9BYR5 136 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 DPH1Q9BZG8 443 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 KIAA1683Q9H0B3 1180 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 SAYSD1Q9NPB0 183 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 RGL1Q9NZL6 768 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 IGSF9Q9P2J2 1179 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 SCAF8Q9UPN6 1271 aaKnown RBP4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 TBC1D30Q9Y2I9 924 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 PLEKHM1Q9Y4G2 1056 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 RPS6KL1Q9Y6S9 549 aa4.3□□□□□ -1.72
HMGB1P25-201ENST00000468402 ZMYM3Q14202 1370 aa4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 MBD3L4A6NDZ8 208 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 MBD3L3A6NE82 208 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 CLCA1A8K7I4 914 aa4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 PRSS47A8MTI9 375 aa4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 FIBPO43427 364 aa4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 TIMM44O43615 452 aa4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 ASNA1O43681 348 aa4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 INMTO95050 263 aa4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 CD4P01730 458 aa4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 JUNP05412 331 aaKnown RBP4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 CKMT1AP12532 417 aa4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 ALOX15P16050 662 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 TPH1P17752 444 aa4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 ETV4P43268 484 aa4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 SLC11A2P49281 568 aa4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 PAPOLAP51003 745 aaKnown RBP4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 ZNF135P52742 658 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 NPEPPSP55786 919 aa4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 POLE2P56282 527 aa4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 MPP1Q00013 466 aa4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 TOP3AQ13472 1001 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 KCNMB1Q16558 191 aa4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 FAM47AQ5JRC9 791 aa4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 FBXO47Q5MNV8 452 aa4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 UTP14CQ5TAP6 766 aaKnown RBP4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 CFAP161Q6P656 301 aa4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 CRTC1Q6UUV9 634 aa4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 LARP4Q71RC2 724 aaKnown RBP eCLIP4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 USP37Q86T82 979 aa4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 HEATR4Q86WZ0 1026 aa4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 LILRA3Q8N6C8 439 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 SLC17A8Q8NDX2 589 aa4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 OR14K1Q8NGZ2 314 aa4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 SLC30A5Q8TAD4 765 aa4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 CYP2W1Q8TAV3 490 aa4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 ASB12Q8WXK4 309 aa4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 DDX17Q92841 729 aaKnown RBP4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 SLC7A6OSQ96CW6 309 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 MAELQ96JY0 434 aaKnown RBP4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 NOX5Q96PH1 765 aa4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 PCDHAC1Q9H158 963 aa4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 TAF1DQ9H5J8 278 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 ZNF552Q9H707 407 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 NECTIN3Q9NQS3 549 aa4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 GGA3Q9NZ52 723 aa4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 HERC5Q9UII4 1024 aaKnown RBP4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 SLC13A4Q9UKG4 626 aa4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 ZDHHC9Q9Y397 364 aa4.29□□□□□ -1.72
HMGB1P25-201ENST00000468402 ITIH6Q6UXX5 1313 aa4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 A6NLC8 198 aa4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 B8ZZF3 427 aa4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 WNT10BO00744 389 aa4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 MTSS1O43312 755 aa4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 COQ9O75208 318 aa4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 VPS4BO75351 444 aa4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 SLC43A1O75387 559 aa4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 SOAT2O75908 522 aa4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 KLHL18O94889 574 aa4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 CYP1A1P04798 512 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 GLI1P08151 1106 aa4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 SRGAP2BP0DMP2 458 aa4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 VSIG10L2P0DP72 767 aa4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 ALAS1P13196 640 aa4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 GYS1P13807 737 aa4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 IL1R1P14778 569 aa4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 RXRAP19793 462 aa4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 BTF3P20290 206 aaKnown RBP4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 LIMS1P48059 325 aa4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 AARSP49588 968 aaKnown RBP eCLIP4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 COPAP53621 1224 aa4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 EIF5P55010 431 aaKnown RBP4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 SATB1Q01826 763 aa4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 TRPC3Q13507 836 aa4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 SLC12A1Q13621 1099 aa4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 DLGAP5Q15398 846 aa4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 MFSD14BQ5SR56 506 aa4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 ATPAF1Q5TC12 328 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 CCDC30Q5VVM6 783 aa4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 ARL6IP4Q66PJ3 421 aaKnown RBP4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 TRIM68Q6AZZ1 485 aa4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 ZNF280DQ6N043 979 aa4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 MZT2BQ6NZ67 158 aa4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 LRRTM4Q86VH4 590 aa4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 VGLL2Q8N8G2 317 aa4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 FAM46DQ8NEK8 389 aa4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 FLAD1Q8NFF5 587 aa4.28□□□□□ -1.72
HMGB1P25-201ENST00000468402 NUDT10Q8NFP7 164 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms