RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 TAF6P49848 677 aa21.9■■□□□ 1.1
TMEM53-207ENST00000468117 SOWAHAQ2M3V2 549 aa21.9■■□□□ 1.1
TMEM53-207ENST00000468117 RTN4RL1Q86UN2 441 aaPredicted RBP21.9■■□□□ 1.1
TMEM53-207ENST00000468117 MNS1Q8NEH6 495 aa21.9■■□□□ 1.1
TMEM53-207ENST00000468117 SLC38A7Q9NVC3 462 aa21.9■■□□□ 1.1
TMEM53-207ENST00000468117 KIAA0100Q14667 2235 aaKnown RBP21.89■■□□□ 1.1
TMEM53-207ENST00000468117 ZNF185O15231 689 aa21.89■■□□□ 1.1
TMEM53-207ENST00000468117 CTIFO43310 598 aaKnown RBP21.89■■□□□ 1.1
TMEM53-207ENST00000468117 CXCR5P32302 372 aa21.89■■□□□ 1.1
TMEM53-207ENST00000468117 MNX1P50219 401 aaPredicted RBP21.89■■□□□ 1.1
TMEM53-207ENST00000468117 DNA2P51530 1060 aa21.89■■□□□ 1.1
TMEM53-207ENST00000468117 BFSP2Q13515 415 aa21.89■■□□□ 1.1
TMEM53-207ENST00000468117 MON1BQ7L1V2 547 aa21.89■■□□□ 1.1
TMEM53-207ENST00000468117 SLFN11Q7Z7L1 901 aa21.89■■□□□ 1.1
TMEM53-207ENST00000468117 PHLDB2Q86SQ0 1253 aa21.89■■□□□ 1.1
TMEM53-207ENST00000468117 CAPZA3Q96KX2 299 aa21.89■■□□□ 1.1
TMEM53-207ENST00000468117 C11orf70Q9BRQ4 267 aa21.89■■□□□ 1.1
TMEM53-207ENST00000468117 NUP85Q9BW27 656 aa21.89■■□□□ 1.1
TMEM53-207ENST00000468117 TSPYL2Q9H2G4 693 aaPredicted RBP21.89■■□□□ 1.1
TMEM53-207ENST00000468117 FAM124BQ9H5Z6 455 aaPredicted RBP21.89■■□□□ 1.1
TMEM53-207ENST00000468117 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.89■■□□□ 1.1
TMEM53-207ENST00000468117 PCDHGC3Q9UN70 934 aa21.89■■□□□ 1.1
TMEM53-207ENST00000468117 V9GYY5 206 aaPredicted RBP21.89■■□□□ 1.1
TMEM53-207ENST00000468117 IGFBP6P24592 240 aaPredicted RBP21.89■■□□□ 1.09
TMEM53-207ENST00000468117 LILRA4P59901 499 aa21.89■■□□□ 1.09
TMEM53-207ENST00000468117 TCEAL1Q15170 157 aa21.89■■□□□ 1.09
TMEM53-207ENST00000468117 LLGL2Q6P1M3 1020 aa21.89■■□□□ 1.09
TMEM53-207ENST00000468117 CTU1Q7Z7A3 348 aaKnown RBP21.89■■□□□ 1.09
TMEM53-207ENST00000468117 ECHDC2Q86YB7 292 aa21.89■■□□□ 1.09
TMEM53-207ENST00000468117 TTC39CQ8N584 583 aa21.89■■□□□ 1.09
TMEM53-207ENST00000468117 C1orf131Q8NDD1 294 aaKnown RBP21.89■■□□□ 1.09
TMEM53-207ENST00000468117 PGBD4Q96DM1 585 aa21.89■■□□□ 1.09
TMEM53-207ENST00000468117 ZNF333Q96JL9 665 aa21.89■■□□□ 1.09
TMEM53-207ENST00000468117 HEXIM2Q96MH2 286 aaKnown RBP21.89■■□□□ 1.09
TMEM53-207ENST00000468117 NT5C1AQ9BXI3 368 aa21.89■■□□□ 1.09
TMEM53-207ENST00000468117 RGS18Q9NS28 235 aa21.89■■□□□ 1.09
TMEM53-207ENST00000468117 NME7Q9Y5B8 376 aa21.89■■□□□ 1.09
TMEM53-207ENST00000468117 RRM1P23921 792 aa21.88■■□□□ 1.09
TMEM53-207ENST00000468117 HADHBP55084 474 aaKnown RBP21.88■■□□□ 1.09
TMEM53-207ENST00000468117 NAA30Q147X3 362 aaPredicted RBP21.88■■□□□ 1.09
TMEM53-207ENST00000468117 SV2CQ496J9 727 aa21.88■■□□□ 1.09
TMEM53-207ENST00000468117 DPH6Q7L8W6 267 aa21.88■■□□□ 1.09
TMEM53-207ENST00000468117 SYCE1Q8N0S2 351 aa21.88■■□□□ 1.09
TMEM53-207ENST00000468117 LINC01599Q8WXQ3 324 aa21.88■■□□□ 1.09
TMEM53-207ENST00000468117 OSBPL9Q96SU4 736 aa21.88■■□□□ 1.09
TMEM53-207ENST00000468117 CRISPLD2Q9H0B8 497 aa21.88■■□□□ 1.09
TMEM53-207ENST00000468117 GDAP2Q9NXN4 497 aa21.88■■□□□ 1.09
TMEM53-207ENST00000468117 ADAM22Q9P0K1 906 aa21.88■■□□□ 1.09
TMEM53-207ENST00000468117 HYOU1Q9Y4L1 999 aa21.88■■□□□ 1.09
TMEM53-207ENST00000468117 MED7O43513 233 aa21.87■■□□□ 1.09
TMEM53-207ENST00000468117 NBNO60934 754 aa21.87■■□□□ 1.09
TMEM53-207ENST00000468117 LSM8O95777 96 aaKnown RBP21.87■■□□□ 1.09
TMEM53-207ENST00000468117 POMCP01189 267 aa21.87■■□□□ 1.09
TMEM53-207ENST00000468117 SKIP12755 728 aa21.87■■□□□ 1.09
TMEM53-207ENST00000468117 WHAMMP3Q1A5X7 153 aa21.87■■□□□ 1.09
TMEM53-207ENST00000468117 DENND1BQ6P3S1 775 aa21.87■■□□□ 1.09
TMEM53-207ENST00000468117 MMS22LQ6ZRQ5 1243 aa21.87■■□□□ 1.09
TMEM53-207ENST00000468117 PEX26Q7Z412 305 aa21.87■■□□□ 1.09
TMEM53-207ENST00000468117 ZNF598Q86UK7 904 aaKnown RBP21.87■■□□□ 1.09
TMEM53-207ENST00000468117 PHF13Q86YI8 300 aaPredicted RBP21.87■■□□□ 1.09
TMEM53-207ENST00000468117 WDTC1Q8N5D0 677 aa21.87■■□□□ 1.09
TMEM53-207ENST00000468117 TMEM35BQ8NCS4 154 aa21.87■■□□□ 1.09
TMEM53-207ENST00000468117 ZNF564Q8TBZ8 553 aaPredicted RBP21.87■■□□□ 1.09
TMEM53-207ENST00000468117 COG1Q8WTW3 980 aa21.87■■□□□ 1.09
TMEM53-207ENST00000468117 RABGGTAQ92696 567 aa21.87■■□□□ 1.09
TMEM53-207ENST00000468117 INPP5FQ9Y2H2 1132 aa21.87■■□□□ 1.09
TMEM53-207ENST00000468117 PRLRP16471 622 aa21.87■■□□□ 1.09
TMEM53-207ENST00000468117 CLCNKBP51801 687 aa21.87■■□□□ 1.09
TMEM53-207ENST00000468117 GPNMBQ14956 572 aa21.87■■□□□ 1.09
TMEM53-207ENST00000468117 FBXO46Q6PJ61 603 aaPredicted RBP21.87■■□□□ 1.09
TMEM53-207ENST00000468117 C12orf29Q8N999 325 aa21.87■■□□□ 1.09
TMEM53-207ENST00000468117 OR6B3Q8NGW1 331 aa21.87■■□□□ 1.09
TMEM53-207ENST00000468117 TRIM11Q96F44 468 aa21.87■■□□□ 1.09
TMEM53-207ENST00000468117 CASTOR2A6NHX0 329 aa21.86■■□□□ 1.09
TMEM53-207ENST00000468117 C9IYK1 514 aa21.86■■□□□ 1.09
TMEM53-207ENST00000468117 MTA2O94776 668 aa21.86■■□□□ 1.09
TMEM53-207ENST00000468117 MYBL1P10243 752 aa21.86■■□□□ 1.09
TMEM53-207ENST00000468117 HSPA8P11142 646 aaKnown RBP21.86■■□□□ 1.09
TMEM53-207ENST00000468117 VDRP11473 427 aa21.86■■□□□ 1.09
TMEM53-207ENST00000468117 PTP4A2Q12974 167 aa21.86■■□□□ 1.09
TMEM53-207ENST00000468117 SGO2Q562F6 1265 aa21.86■■□□□ 1.09
TMEM53-207ENST00000468117 SLC39A5Q6ZMH5 540 aa21.86■■□□□ 1.09
TMEM53-207ENST00000468117 SLC24A5Q71RS6 500 aa21.86■■□□□ 1.09
TMEM53-207ENST00000468117 NT5DC3Q86UY8 548 aa21.86■■□□□ 1.09
TMEM53-207ENST00000468117 KBTBD7Q8WVZ9 684 aa21.86■■□□□ 1.09
TMEM53-207ENST00000468117 BTBD6Q96KE9 485 aa21.86■■□□□ 1.09
TMEM53-207ENST00000468117 PAAF1Q9BRP4 392 aa21.86■■□□□ 1.09
TMEM53-207ENST00000468117 UVRAGQ9P2Y5 699 aa21.86■■□□□ 1.09
TMEM53-207ENST00000468117 L1RE1Q9UN81 338 aa21.86■■□□□ 1.09
TMEM53-207ENST00000468117 CEP83Q9Y592 693 aa21.86■■□□□ 1.09
TMEM53-207ENST00000468117 TANC1Q9C0D5 1861 aa21.86■■□□□ 1.09
TMEM53-207ENST00000468117 PITPNM1O00562 1244 aa21.85■■□□□ 1.09
TMEM53-207ENST00000468117 HCRTO43612 131 aa21.85■■□□□ 1.09
TMEM53-207ENST00000468117 TCP1P17987 556 aaKnown RBP21.85■■□□□ 1.09
TMEM53-207ENST00000468117 MMP8P22894 467 aa21.85■■□□□ 1.09
TMEM53-207ENST00000468117 CDH5P33151 784 aaPredicted RBP21.85■■□□□ 1.09
TMEM53-207ENST00000468117 ACOT1Q86TX2 421 aa21.85■■□□□ 1.09
TMEM53-207ENST00000468117 APPL2Q8NEU8 664 aa21.85■■□□□ 1.09
TMEM53-207ENST00000468117 VCPIP1Q96JH7 1222 aa21.85■■□□□ 1.09
TMEM53-207ENST00000468117 ZNF518BQ9C0D4 1074 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms