RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 GFPT1Q06210 699 aaPredicted RBP11.21□□□□□ -0.61
HDAC3-203ENST00000467533 BFSP1Q12934 665 aa11.21□□□□□ -0.61
HDAC3-203ENST00000467533 INF2Q27J81 1249 aa11.21□□□□□ -0.61
HDAC3-203ENST00000467533 RNF20Q5VTR2 975 aa11.21□□□□□ -0.61
HDAC3-203ENST00000467533 CC2D1AQ6P1N0 951 aaPredicted RBP11.21□□□□□ -0.61
HDAC3-203ENST00000467533 DNAJB7Q7Z6W7 309 aaPredicted RBP11.21□□□□□ -0.61
HDAC3-203ENST00000467533 RASSF3Q86WH2 238 aa11.21□□□□□ -0.61
HDAC3-203ENST00000467533 LURAP1LQ8IV03 231 aa11.21□□□□□ -0.61
HDAC3-203ENST00000467533 BLIDQ8IZY5 108 aa11.21□□□□□ -0.61
HDAC3-203ENST00000467533 DAGLBQ8NCG7 672 aa11.21□□□□□ -0.61
HDAC3-203ENST00000467533 OR2I1PQ8NGU4 316 aa11.21□□□□□ -0.61
HDAC3-203ENST00000467533 EZH1Q92800 747 aaPredicted RBP11.21□□□□□ -0.61
HDAC3-203ENST00000467533 CD101Q93033 1021 aa11.21□□□□□ -0.61
HDAC3-203ENST00000467533 PSMG2Q969U7 264 aa11.21□□□□□ -0.61
HDAC3-203ENST00000467533 SUSD3Q96L08 255 aa11.21□□□□□ -0.61
HDAC3-203ENST00000467533 CRISPLD1Q9H336 500 aa11.21□□□□□ -0.61
HDAC3-203ENST00000467533 ANO2Q9NQ90 1003 aa11.21□□□□□ -0.61
HDAC3-203ENST00000467533 SH3GLB2Q9NR46 395 aa11.21□□□□□ -0.61
HDAC3-203ENST00000467533 TOPORSQ9NS56 1045 aaPredicted RBP11.21□□□□□ -0.61
HDAC3-203ENST00000467533 ANKEF1Q9NU02 776 aa11.21□□□□□ -0.61
HDAC3-203ENST00000467533 SLC6A14Q9UN76 642 aa11.21□□□□□ -0.61
HDAC3-203ENST00000467533 APOBEC2Q9Y235 224 aaKnown RBP11.21□□□□□ -0.61
HDAC3-203ENST00000467533 ASB3Q9Y575 518 aa11.21□□□□□ -0.61
HDAC3-203ENST00000467533 APC2O95996 2303 aa11.21□□□□□ -0.62
HDAC3-203ENST00000467533 PI4KAP42356 2102 aa11.21□□□□□ -0.62
HDAC3-203ENST00000467533 CITO14578 2027 aa11.21□□□□□ -0.62
HDAC3-203ENST00000467533 OBSL1O75147 1896 aa11.21□□□□□ -0.62
HDAC3-203ENST00000467533 NID2Q14112 1375 aa11.2□□□□□ -0.62
HDAC3-203ENST00000467533 DENND4CQ5VZ89 1909 aa11.2□□□□□ -0.62
HDAC3-203ENST00000467533 J3QKU1 62 aa11.2□□□□□ -0.62
HDAC3-203ENST00000467533 ACKR2O00590 384 aa11.2□□□□□ -0.62
HDAC3-203ENST00000467533 SH3BP5O60239 455 aa11.2□□□□□ -0.62
HDAC3-203ENST00000467533 ALDH1A2O94788 518 aa11.2□□□□□ -0.62
HDAC3-203ENST00000467533 VNN2O95498 520 aa11.2□□□□□ -0.62
HDAC3-203ENST00000467533 EDN1P05305 212 aa11.2□□□□□ -0.62
HDAC3-203ENST00000467533 CD59P13987 128 aa11.2□□□□□ -0.62
HDAC3-203ENST00000467533 MARCKSP29966 332 aaPredicted RBP11.2□□□□□ -0.62
HDAC3-203ENST00000467533 CDC25CP30307 473 aa11.2□□□□□ -0.62
HDAC3-203ENST00000467533 GJA4P35212 333 aa11.2□□□□□ -0.62
HDAC3-203ENST00000467533 RARRES1P49788 294 aa11.2□□□□□ -0.62
HDAC3-203ENST00000467533 SEC13P55735 322 aa11.2□□□□□ -0.62
HDAC3-203ENST00000467533 YWHAHQ04917 246 aaPredicted RBP11.2□□□□□ -0.62
HDAC3-203ENST00000467533 DUOXA1Q1HG43 343 aa11.2□□□□□ -0.62
HDAC3-203ENST00000467533 APBB1IPQ7Z5R6 666 aaPredicted RBP11.2□□□□□ -0.62
HDAC3-203ENST00000467533 ITIH5Q86UX2 942 aa11.2□□□□□ -0.62
HDAC3-203ENST00000467533 CPA6Q8N4T0 437 aa11.2□□□□□ -0.62
HDAC3-203ENST00000467533 SPRYD3Q8NCJ5 442 aa11.2□□□□□ -0.62
HDAC3-203ENST00000467533 BEST2Q8NFU1 509 aa11.2□□□□□ -0.62
HDAC3-203ENST00000467533 PIP4K2CQ8TBX8 421 aa11.2□□□□□ -0.62
HDAC3-203ENST00000467533 RLN3Q8WXF3 142 aa11.2□□□□□ -0.62
HDAC3-203ENST00000467533 TBC1D32Q96NH3 1257 aa11.2□□□□□ -0.62
HDAC3-203ENST00000467533 DCBLD2Q96PD2 775 aa11.2□□□□□ -0.62
HDAC3-203ENST00000467533 CCDC94Q9BW85 323 aaPredicted RBP11.2□□□□□ -0.62
HDAC3-203ENST00000467533 PCDHB8Q9UN66 801 aa11.2□□□□□ -0.62
HDAC3-203ENST00000467533 SLC27A5Q9Y2P5 690 aa11.2□□□□□ -0.62
HDAC3-203ENST00000467533 CELSR3Q9NYQ7 3312 aa11.19□□□□□ -0.62
HDAC3-203ENST00000467533 A0A087WV48 116 aa11.19□□□□□ -0.62
HDAC3-203ENST00000467533 SOAT2O75908 522 aa11.19□□□□□ -0.62
HDAC3-203ENST00000467533 SLITRK3O94933 977 aa11.19□□□□□ -0.62
HDAC3-203ENST00000467533 ITPKAP23677 461 aa11.19□□□□□ -0.62
HDAC3-203ENST00000467533 HOXD12P35452 270 aa11.19□□□□□ -0.62
HDAC3-203ENST00000467533 AVPR1AP37288 418 aa11.19□□□□□ -0.62
HDAC3-203ENST00000467533 P2RY2P41231 377 aa11.19□□□□□ -0.62
HDAC3-203ENST00000467533 OSTNP61366 133 aa11.19□□□□□ -0.62
HDAC3-203ENST00000467533 VEPH1Q14D04 833 aa11.19□□□□□ -0.62
HDAC3-203ENST00000467533 PDGFRLQ15198 375 aa11.19□□□□□ -0.62
HDAC3-203ENST00000467533 C2orf27AQ580R0 203 aa11.19□□□□□ -0.62
HDAC3-203ENST00000467533 ATF7IP2Q5U623 682 aa11.19□□□□□ -0.62
HDAC3-203ENST00000467533 KRT25Q7Z3Z0 450 aa11.19□□□□□ -0.62
HDAC3-203ENST00000467533 NAXDQ8IW45 347 aa11.19□□□□□ -0.62
HDAC3-203ENST00000467533 SCUBE3Q8IX30 993 aa11.19□□□□□ -0.62
HDAC3-203ENST00000467533 CMTM8Q8IZV2 173 aa11.19□□□□□ -0.62
HDAC3-203ENST00000467533 TTC9BQ8N6N2 239 aa11.19□□□□□ -0.62
HDAC3-203ENST00000467533 CEP120Q8N960 986 aa11.19□□□□□ -0.62
HDAC3-203ENST00000467533 CCDC26Q8TAB7 109 aa11.19□□□□□ -0.62
HDAC3-203ENST00000467533 CEP76Q8TAP6 659 aa11.19□□□□□ -0.62
HDAC3-203ENST00000467533 DEPTORQ8TB45 409 aa11.19□□□□□ -0.62
HDAC3-203ENST00000467533 WHAMMQ8TF30 809 aa11.19□□□□□ -0.62
HDAC3-203ENST00000467533 FNBP1Q96RU3 617 aa11.19□□□□□ -0.62
HDAC3-203ENST00000467533 EIF2AK1Q9BQI3 630 aaKnown RBP11.19□□□□□ -0.62
HDAC3-203ENST00000467533 CCDC113Q9H0I3 377 aa11.19□□□□□ -0.62
HDAC3-203ENST00000467533 KIF9Q9HAQ2 790 aa11.19□□□□□ -0.62
HDAC3-203ENST00000467533 BCCIPQ9P287 314 aaKnown RBP eCLIP11.19□□□□□ -0.62
HDAC3-203ENST00000467533 DKK4Q9UBT3 224 aa11.19□□□□□ -0.62
HDAC3-203ENST00000467533 PILRBQ9UKJ0 227 aa11.19□□□□□ -0.62
HDAC3-203ENST00000467533 TBX20Q9UMR3 447 aa11.19□□□□□ -0.62
HDAC3-203ENST00000467533 CCL26Q9Y258 94 aa11.19□□□□□ -0.62
HDAC3-203ENST00000467533 STK24Q9Y6E0 443 aa11.19□□□□□ -0.62
HDAC3-203ENST00000467533 ZNF462Q96JM2 2506 aa11.18□□□□□ -0.62
HDAC3-203ENST00000467533 MUC22E2RYF6 1773 aaPredicted RBP11.18□□□□□ -0.62
HDAC3-203ENST00000467533 MYO18BQ8IUG5 2567 aa11.18□□□□□ -0.62
HDAC3-203ENST00000467533 MTMR11A4FU01 709 aa11.18□□□□□ -0.62
HDAC3-203ENST00000467533 M0R2N6 131 aa11.18□□□□□ -0.62
HDAC3-203ENST00000467533 CCNT1O60563 726 aaKnown RBP11.18□□□□□ -0.62
HDAC3-203ENST00000467533 LYPLA2O95372 231 aa11.18□□□□□ -0.62
HDAC3-203ENST00000467533 SERPINF2P08697 491 aa11.18□□□□□ -0.62
HDAC3-203ENST00000467533 GCFC2P16383 781 aaKnown RBP11.18□□□□□ -0.62
HDAC3-203ENST00000467533 RPL9P32969 192 aaKnown RBP11.18□□□□□ -0.62
HDAC3-203ENST00000467533 CYP4F3Q08477 520 aa11.18□□□□□ -0.62
HDAC3-203ENST00000467533 AAMPQ13685 434 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms