RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 OR10T2Q8NGX3 314 aa10.19□□□□□ -0.78
SDCCAG3-208ENST00000466579 HPDLQ96IR7 371 aa10.19□□□□□ -0.78
SDCCAG3-208ENST00000466579 RIPOR3Q96MK2 946 aa10.19□□□□□ -0.78
SDCCAG3-208ENST00000466579 UHRF1Q96T88 793 aaPredicted RBP10.19□□□□□ -0.78
SDCCAG3-208ENST00000466579 TSG101Q99816 390 aa10.19□□□□□ -0.78
SDCCAG3-208ENST00000466579 DUSP9Q99956 384 aaKnown RBP10.19□□□□□ -0.78
SDCCAG3-208ENST00000466579 ZCWPW1Q9H0M4 648 aa10.19□□□□□ -0.78
SDCCAG3-208ENST00000466579 POMKQ9H5K3 350 aa10.19□□□□□ -0.78
SDCCAG3-208ENST00000466579 L1RE1Q9UN81 338 aa10.19□□□□□ -0.78
SDCCAG3-208ENST00000466579 DOCK6Q96HP0 2047 aa10.19□□□□□ -0.78
SDCCAG3-208ENST00000466579 DOCK8Q8NF50 2099 aa10.18□□□□□ -0.78
SDCCAG3-208ENST00000466579 HUS1O60921 280 aa10.18□□□□□ -0.78
SDCCAG3-208ENST00000466579 VNN1O95497 513 aa10.18□□□□□ -0.78
SDCCAG3-208ENST00000466579 C8AP07357 584 aa10.18□□□□□ -0.78
SDCCAG3-208ENST00000466579 KRT19P08727 400 aa10.18□□□□□ -0.78
SDCCAG3-208ENST00000466579 GTF2H1P32780 548 aa10.18□□□□□ -0.78
SDCCAG3-208ENST00000466579 SMARCB1Q12824 385 aa10.18□□□□□ -0.78
SDCCAG3-208ENST00000466579 CAMK4Q16566 473 aa10.18□□□□□ -0.78
SDCCAG3-208ENST00000466579 SOWAHAQ2M3V2 549 aa10.18□□□□□ -0.78
SDCCAG3-208ENST00000466579 LIN9Q5TKA1 542 aa10.18□□□□□ -0.78
SDCCAG3-208ENST00000466579 RNF19BQ6ZMZ0 732 aa10.18□□□□□ -0.78
SDCCAG3-208ENST00000466579 RBM43Q6ZSC3 357 aaKnown RBP10.18□□□□□ -0.78
SDCCAG3-208ENST00000466579 SV2AQ7L0J3 742 aa10.18□□□□□ -0.78
SDCCAG3-208ENST00000466579 METTL23Q86XA0 190 aa10.18□□□□□ -0.78
SDCCAG3-208ENST00000466579 GPT2Q8TD30 523 aa10.18□□□□□ -0.78
SDCCAG3-208ENST00000466579 KBTBD7Q8WVZ9 684 aa10.18□□□□□ -0.78
SDCCAG3-208ENST00000466579 CEP63Q96MT8 703 aa10.18□□□□□ -0.78
SDCCAG3-208ENST00000466579 NECAB3Q96P71 396 aaPredicted RBP10.18□□□□□ -0.78
SDCCAG3-208ENST00000466579 PKMYT1Q99640 499 aa10.18□□□□□ -0.78
SDCCAG3-208ENST00000466579 ACBD6Q9BR61 282 aa10.18□□□□□ -0.78
SDCCAG3-208ENST00000466579 APOL5Q9BWW9 433 aa10.18□□□□□ -0.78
SDCCAG3-208ENST00000466579 WDR6Q9NNW5 1121 aaKnown RBP10.18□□□□□ -0.78
SDCCAG3-208ENST00000466579 CD320Q9NPF0 282 aa10.18□□□□□ -0.78
SDCCAG3-208ENST00000466579 AVENQ9NQS1 362 aaPredicted RBP10.18□□□□□ -0.78
SDCCAG3-208ENST00000466579 CDH22Q9UJ99 828 aa10.18□□□□□ -0.78
SDCCAG3-208ENST00000466579 USTQ9Y2C2 406 aa10.18□□□□□ -0.78
SDCCAG3-208ENST00000466579 BDP1A6H8Y1 2624 aa10.18□□□□□ -0.78
SDCCAG3-208ENST00000466579 BICDL2A1A5D9 508 aa10.17□□□□□ -0.78
SDCCAG3-208ENST00000466579 MTMR11A4FU01 709 aa10.17□□□□□ -0.78
SDCCAG3-208ENST00000466579 TRIM49BA6NDI0 452 aa10.17□□□□□ -0.78
SDCCAG3-208ENST00000466579 BIN1O00499 593 aa10.17□□□□□ -0.78
SDCCAG3-208ENST00000466579 TACC1O75410 805 aa10.17□□□□□ -0.78
SDCCAG3-208ENST00000466579 SEC24AO95486 1093 aa10.17□□□□□ -0.78
SDCCAG3-208ENST00000466579 EPB41P11171 864 aaKnown RBP10.17□□□□□ -0.78
SDCCAG3-208ENST00000466579 KRT13P13646 458 aa10.17□□□□□ -0.78
SDCCAG3-208ENST00000466579 WARSP23381 471 aaKnown RBP10.17□□□□□ -0.78
SDCCAG3-208ENST00000466579 LHX1P48742 406 aa10.17□□□□□ -0.78
SDCCAG3-208ENST00000466579 MYL6P60660 151 aa10.17□□□□□ -0.78
SDCCAG3-208ENST00000466579 PPP3CAQ08209 521 aa10.17□□□□□ -0.78
SDCCAG3-208ENST00000466579 NCOA4Q13772 614 aa10.17□□□□□ -0.78
SDCCAG3-208ENST00000466579 PPM1LQ5SGD2 360 aa10.17□□□□□ -0.78
SDCCAG3-208ENST00000466579 ISM2Q6H9L7 571 aa10.17□□□□□ -0.78
SDCCAG3-208ENST00000466579 FILIP1Q7Z7B0 1213 aa10.17□□□□□ -0.78
SDCCAG3-208ENST00000466579 OSTM1Q86WC4 334 aa10.17□□□□□ -0.78
SDCCAG3-208ENST00000466579 GJD3Q8N144 294 aa10.17□□□□□ -0.78
SDCCAG3-208ENST00000466579 THEM5Q8N1Q8 247 aa10.17□□□□□ -0.78
SDCCAG3-208ENST00000466579 MLKLQ8NB16 471 aa10.17□□□□□ -0.78
SDCCAG3-208ENST00000466579 SLC7A14Q8TBB6 771 aa10.17□□□□□ -0.78
SDCCAG3-208ENST00000466579 C2orf15Q8WU43 125 aaKnown RBP10.17□□□□□ -0.78
SDCCAG3-208ENST00000466579 NELFBQ8WX92 580 aa10.17□□□□□ -0.78
SDCCAG3-208ENST00000466579 SMG7Q92540 1137 aaKnown RBP10.17□□□□□ -0.78
SDCCAG3-208ENST00000466579 TAF4BQ92750 862 aa10.17□□□□□ -0.78
SDCCAG3-208ENST00000466579 SYAP1Q96A49 352 aaPredicted RBP10.17□□□□□ -0.78
SDCCAG3-208ENST00000466579 TMEM209Q96SK2 561 aa10.17□□□□□ -0.78
SDCCAG3-208ENST00000466579 NUP62CLQ9H1M0 184 aa10.17□□□□□ -0.78
SDCCAG3-208ENST00000466579 INSL5Q9Y5Q6 135 aa10.17□□□□□ -0.78
SDCCAG3-208ENST00000466579 SNX9Q9Y5X1 595 aa10.17□□□□□ -0.78
SDCCAG3-208ENST00000466579 CUL9Q8IWT3 2517 aa10.16□□□□□ -0.78
SDCCAG3-208ENST00000466579 CLUHO75153 1309 aa10.16□□□□□ -0.78
SDCCAG3-208ENST00000466579 PTPRDP23468 1912 aa10.16□□□□□ -0.78
SDCCAG3-208ENST00000466579 GOLGA6L22H0YM25 854 aa10.16□□□□□ -0.78
SDCCAG3-208ENST00000466579 TNFRSF10AO00220 468 aa10.16□□□□□ -0.78
SDCCAG3-208ENST00000466579 PMM2O15305 246 aa10.16□□□□□ -0.78
SDCCAG3-208ENST00000466579 ASS1P00966 412 aaKnown RBP10.16□□□□□ -0.78
SDCCAG3-208ENST00000466579 WEE2P0C1S8 567 aa10.16□□□□□ -0.78
SDCCAG3-208ENST00000466579 OR4Q2P0C623 313 aa10.16□□□□□ -0.78
SDCCAG3-208ENST00000466579 TRIM49P0CI25 452 aa10.16□□□□□ -0.78
SDCCAG3-208ENST00000466579 TRIM49CP0CI26 452 aa10.16□□□□□ -0.78
SDCCAG3-208ENST00000466579 CPB1P15086 417 aa10.16□□□□□ -0.78
SDCCAG3-208ENST00000466579 MARSP56192 900 aaKnown RBP10.16□□□□□ -0.78
SDCCAG3-208ENST00000466579 MYL7Q01449 175 aa10.16□□□□□ -0.78
SDCCAG3-208ENST00000466579 ADCY1Q08828 1119 aa10.16□□□□□ -0.78
SDCCAG3-208ENST00000466579 PAK1Q13153 545 aa10.16□□□□□ -0.78
SDCCAG3-208ENST00000466579 TRPC3Q13507 836 aa10.16□□□□□ -0.78
SDCCAG3-208ENST00000466579 SGSM1Q2NKQ1 1148 aa10.16□□□□□ -0.78
SDCCAG3-208ENST00000466579 FAM171BQ6P995 826 aa10.16□□□□□ -0.78
SDCCAG3-208ENST00000466579 FRMD5Q7Z6J6 570 aa10.16□□□□□ -0.78
SDCCAG3-208ENST00000466579 LRRTM3Q86VH5 581 aa10.16□□□□□ -0.78
SDCCAG3-208ENST00000466579 ADGRF2Q8IZF7 708 aa10.16□□□□□ -0.78
SDCCAG3-208ENST00000466579 ZDHHC14Q8IZN3 488 aa10.16□□□□□ -0.78
SDCCAG3-208ENST00000466579 FAXDC2Q96IV6 333 aa10.16□□□□□ -0.78
SDCCAG3-208ENST00000466579 MED15Q96RN5 788 aa10.16□□□□□ -0.78
SDCCAG3-208ENST00000466579 CRISPLD1Q9H336 500 aa10.16□□□□□ -0.78
SDCCAG3-208ENST00000466579 METTL14Q9HCE5 456 aaKnown RBP10.16□□□□□ -0.78
SDCCAG3-208ENST00000466579 TMEM8AQ9HCN3 771 aa10.16□□□□□ -0.78
SDCCAG3-208ENST00000466579 RWDD2AQ9UIY3 292 aa10.16□□□□□ -0.78
SDCCAG3-208ENST00000466579 COQ4Q9Y3A0 265 aa10.16□□□□□ -0.78
SDCCAG3-208ENST00000466579 R3HCC1Q9Y3T6 440 aaKnown RBP10.16□□□□□ -0.78
SDCCAG3-208ENST00000466579 STX10O60499 249 aa10.15□□□□□ -0.78
SDCCAG3-208ENST00000466579 PHACTR2O75167 634 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms