RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 ANO7Q6IWH7 933 aa16.09■□□□□ 0.17
HMGXB4-206ENST00000466438 DNAJB7Q7Z6W7 309 aaPredicted RBP16.09■□□□□ 0.17
HMGXB4-206ENST00000466438 BLIDQ8IZY5 108 aa16.09■□□□□ 0.17
HMGXB4-206ENST00000466438 SLC39A7Q92504 469 aa16.09■□□□□ 0.17
HMGXB4-206ENST00000466438 DDX12PQ92771 950 aa16.09■□□□□ 0.17
HMGXB4-206ENST00000466438 HAS1Q92839 578 aa16.09■□□□□ 0.17
HMGXB4-206ENST00000466438 IPO9Q96P70 1041 aaKnown RBP16.09■□□□□ 0.17
HMGXB4-206ENST00000466438 SLC26A6Q9BXS9 759 aa16.09■□□□□ 0.17
HMGXB4-206ENST00000466438 CRISPLD1Q9H336 500 aa16.09■□□□□ 0.17
HMGXB4-206ENST00000466438 GPRC5CQ9NQ84 441 aa16.09■□□□□ 0.17
HMGXB4-206ENST00000466438 TMEM74BQ9NUR3 256 aa16.09■□□□□ 0.17
HMGXB4-206ENST00000466438 TBX20Q9UMR3 447 aa16.09■□□□□ 0.17
HMGXB4-206ENST00000466438 USP20Q9Y2K6 914 aa16.09■□□□□ 0.17
HMGXB4-206ENST00000466438 PLXNB3Q9ULL4 1909 aa16.08■□□□□ 0.16
HMGXB4-206ENST00000466438 MARCH6O60337 910 aa16.08■□□□□ 0.16
HMGXB4-206ENST00000466438 USO1O60763 962 aaKnown RBP16.08■□□□□ 0.16
HMGXB4-206ENST00000466438 EDN1P05305 212 aa16.08■□□□□ 0.16
HMGXB4-206ENST00000466438 GCFC2P16383 781 aaKnown RBP16.08■□□□□ 0.16
HMGXB4-206ENST00000466438 HOXD12P35452 270 aa16.08■□□□□ 0.16
HMGXB4-206ENST00000466438 DUSP4Q13115 394 aa16.08■□□□□ 0.16
HMGXB4-206ENST00000466438 NTRK3Q16288 839 aa16.08■□□□□ 0.16
HMGXB4-206ENST00000466438 XKR4Q5GH76 650 aa16.08■□□□□ 0.16
HMGXB4-206ENST00000466438 PEAR1Q5VY43 1037 aaPredicted RBP16.08■□□□□ 0.16
HMGXB4-206ENST00000466438 EZH1Q92800 747 aaPredicted RBP16.08■□□□□ 0.16
HMGXB4-206ENST00000466438 PGLYRP2Q96PD5 576 aa16.08■□□□□ 0.16
HMGXB4-206ENST00000466438 GTPBP2Q9BX10 602 aaKnown RBP16.08■□□□□ 0.16
HMGXB4-206ENST00000466438 CCDC113Q9H0I3 377 aa16.08■□□□□ 0.16
HMGXB4-206ENST00000466438 SMG9Q9H0W8 520 aaKnown RBP16.08■□□□□ 0.16
HMGXB4-206ENST00000466438 TOPORSQ9NS56 1045 aaPredicted RBP16.08■□□□□ 0.16
HMGXB4-206ENST00000466438 RAI2Q9Y5P3 530 aa16.08■□□□□ 0.16
HMGXB4-206ENST00000466438 MYO16Q9Y6X6 1858 aa16.08■□□□□ 0.16
HMGXB4-206ENST00000466438 PI4KAP42356 2102 aa16.07■□□□□ 0.16
HMGXB4-206ENST00000466438 CFIP05156 583 aa16.07■□□□□ 0.16
HMGXB4-206ENST00000466438 FTH1P19P0C7X4 201 aa16.07■□□□□ 0.16
HMGXB4-206ENST00000466438 CD59P13987 128 aa16.07■□□□□ 0.16
HMGXB4-206ENST00000466438 U2AF2P26368 475 aaKnown RBP eCLIP16.07■□□□□ 0.16
HMGXB4-206ENST00000466438 RPL9P32969 192 aaKnown RBP16.07■□□□□ 0.16
HMGXB4-206ENST00000466438 MCM4P33991 863 aa16.07■□□□□ 0.16
HMGXB4-206ENST00000466438 PTGER3P43115 390 aa16.07■□□□□ 0.16
HMGXB4-206ENST00000466438 YARSP54577 528 aaKnown RBP16.07■□□□□ 0.16
HMGXB4-206ENST00000466438 CYP4F8P98187 520 aa16.07■□□□□ 0.16
HMGXB4-206ENST00000466438 PSMD2Q13200 908 aa16.07■□□□□ 0.16
HMGXB4-206ENST00000466438 TRIP6Q15654 476 aaKnown RBP16.07■□□□□ 0.16
HMGXB4-206ENST00000466438 NAIF1Q69YI7 327 aaPredicted RBP16.07■□□□□ 0.16
HMGXB4-206ENST00000466438 ALKAL1Q6UXT8 129 aa16.07■□□□□ 0.16
HMGXB4-206ENST00000466438 ARMCX6Q7L4S7 300 aa16.07■□□□□ 0.16
HMGXB4-206ENST00000466438 APBB1IPQ7Z5R6 666 aaPredicted RBP16.07■□□□□ 0.16
HMGXB4-206ENST00000466438 ZNF605Q86T29 641 aa16.07■□□□□ 0.16
HMGXB4-206ENST00000466438 ITIH5Q86UX2 942 aa16.07■□□□□ 0.16
HMGXB4-206ENST00000466438 MDGA1Q8NFP4 955 aa16.07■□□□□ 0.16
HMGXB4-206ENST00000466438 CCDC26Q8TAB7 109 aa16.07■□□□□ 0.16
HMGXB4-206ENST00000466438 OLIG1Q8TAK6 271 aa16.07■□□□□ 0.16
HMGXB4-206ENST00000466438 EIF2AK1Q9BQI3 630 aaKnown RBP16.07■□□□□ 0.16
HMGXB4-206ENST00000466438 OXCT2Q9BYC2 517 aaPredicted RBP16.07■□□□□ 0.16
HMGXB4-206ENST00000466438 ZMYM5Q9UJ78 669 aa16.07■□□□□ 0.16
HMGXB4-206ENST00000466438 PCDHB8Q9UN66 801 aa16.07■□□□□ 0.16
HMGXB4-206ENST00000466438 URB1O60287 2271 aaKnown RBP16.07■□□□□ 0.16
HMGXB4-206ENST00000466438 ZNF462Q96JM2 2506 aa16.06■□□□□ 0.16
HMGXB4-206ENST00000466438 A0A087WV48 116 aa16.06■□□□□ 0.16
HMGXB4-206ENST00000466438 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.06■□□□□ 0.16
HMGXB4-206ENST00000466438 ARSAP15289 507 aa16.06■□□□□ 0.16
HMGXB4-206ENST00000466438 IFNAR1P17181 557 aa16.06■□□□□ 0.16
HMGXB4-206ENST00000466438 LIG1P18858 919 aa16.06■□□□□ 0.16
HMGXB4-206ENST00000466438 CDC25CP30307 473 aa16.06■□□□□ 0.16
HMGXB4-206ENST00000466438 GJA4P35212 333 aa16.06■□□□□ 0.16
HMGXB4-206ENST00000466438 P2RY2P41231 377 aa16.06■□□□□ 0.16
HMGXB4-206ENST00000466438 YWHAHQ04917 246 aaPredicted RBP16.06■□□□□ 0.16
HMGXB4-206ENST00000466438 KRT32Q14532 448 aa16.06■□□□□ 0.16
HMGXB4-206ENST00000466438 ADCK5Q3MIX3 580 aa16.06■□□□□ 0.16
HMGXB4-206ENST00000466438 SPDYCQ5MJ68 293 aa16.06■□□□□ 0.16
HMGXB4-206ENST00000466438 LARP1BQ659C4 914 aaKnown RBP16.06■□□□□ 0.16
HMGXB4-206ENST00000466438 LMBRD2Q68DH5 695 aaPredicted RBP16.06■□□□□ 0.16
HMGXB4-206ENST00000466438 MAEAQ7L5Y9 396 aa16.06■□□□□ 0.16
HMGXB4-206ENST00000466438 KRT25Q7Z3Z0 450 aa16.06■□□□□ 0.16
HMGXB4-206ENST00000466438 HSCBQ8IWL3 235 aa16.06■□□□□ 0.16
HMGXB4-206ENST00000466438 TMEFF1Q8IYR6 380 aa16.06■□□□□ 0.16
HMGXB4-206ENST00000466438 MCPH1Q8NEM0 835 aa16.06■□□□□ 0.16
HMGXB4-206ENST00000466438 CD101Q93033 1021 aa16.06■□□□□ 0.16
HMGXB4-206ENST00000466438 CRELD1Q96HD1 420 aa16.06■□□□□ 0.16
HMGXB4-206ENST00000466438 SPACA7Q96KW9 195 aa16.06■□□□□ 0.16
HMGXB4-206ENST00000466438 ZMAT2Q96NC0 199 aaKnown RBP16.06■□□□□ 0.16
HMGXB4-206ENST00000466438 GCNAQ96QF7 691 aa16.06■□□□□ 0.16
HMGXB4-206ENST00000466438 HSD17B14Q9BPX1 270 aa16.06■□□□□ 0.16
HMGXB4-206ENST00000466438 SLC46A2Q9BY10 475 aa16.06■□□□□ 0.16
HMGXB4-206ENST00000466438 PILRBQ9UKJ0 227 aa16.06■□□□□ 0.16
HMGXB4-206ENST00000466438 SLC6A14Q9UN76 642 aa16.06■□□□□ 0.16
HMGXB4-206ENST00000466438 CFAP46Q8IYW2 2715 aa16.05■□□□□ 0.16
HMGXB4-206ENST00000466438 ATXN2Q99700 1313 aaKnown RBP16.05■□□□□ 0.16
HMGXB4-206ENST00000466438 ATXN7O15265 892 aaPredicted RBP16.05■□□□□ 0.16
HMGXB4-206ENST00000466438 MAP3K13O43283 966 aa16.05■□□□□ 0.16
HMGXB4-206ENST00000466438 OAZ2O95190 189 aa16.05■□□□□ 0.16
HMGXB4-206ENST00000466438 OR4Q2P0C623 313 aa16.05■□□□□ 0.16
HMGXB4-206ENST00000466438 MARCKSP29966 332 aaPredicted RBP16.05■□□□□ 0.16
HMGXB4-206ENST00000466438 GRM5P41594 1212 aa16.05■□□□□ 0.16
HMGXB4-206ENST00000466438 GFPT1Q06210 699 aaPredicted RBP16.05■□□□□ 0.16
HMGXB4-206ENST00000466438 GPR17Q13304 367 aa16.05■□□□□ 0.16
HMGXB4-206ENST00000466438 PDGFRLQ15198 375 aa16.05■□□□□ 0.16
HMGXB4-206ENST00000466438 NPY5RQ15761 445 aa16.05■□□□□ 0.16
HMGXB4-206ENST00000466438 DUOXA1Q1HG43 343 aa16.05■□□□□ 0.16
HMGXB4-206ENST00000466438 LYSMD4Q5XG99 296 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms