RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 GPR152Q8TDT2 470 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 LRRC15Q8TF66 581 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 POMGNT1Q8WZA1 660 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 UROC1Q96N76 676 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 ACAP3Q96P50 834 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 FAM193BQ96PV7 902 aaPredicted RBP7.52□□□□□ -1.21
CLDN4-204ENST00000466411 FIZ1Q96SL8 496 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 HNRNPABQ99729 332 aaKnown RBP7.52□□□□□ -1.21
CLDN4-204ENST00000466411 TSG101Q99816 390 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 TCF25Q9BQ70 676 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 LSM14BQ9BX40 385 aaKnown RBP7.52□□□□□ -1.21
CLDN4-204ENST00000466411 ASB7Q9H672 318 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 CWH43Q9H720 699 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 PTPRHQ9HD43 1115 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 NGRNQ9NPE2 291 aaKnown RBP7.52□□□□□ -1.21
CLDN4-204ENST00000466411 PRDM9Q9NQV7 894 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 ARHGEF3Q9NR81 526 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 LMBRD1Q9NUN5 540 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 TYW1Q9NV66 732 aaKnown RBP7.52□□□□□ -1.21
CLDN4-204ENST00000466411 DERAQ9Y315 318 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 IPPQ9Y573 584 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 PCDHB12Q9Y5F1 795 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 STYXL1Q9Y6J8 313 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 SPTA1P02549 2419 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 PCNX2A6NKB5 2137 aa7.52□□□□□ -1.21
CLDN4-204ENST00000466411 HECTD1Q9ULT8 2610 aa7.51□□□□□ -1.21
CLDN4-204ENST00000466411 DOCK6Q96HP0 2047 aa7.51□□□□□ -1.21
CLDN4-204ENST00000466411 A0A0B4J269 797 aa7.51□□□□□ -1.21
CLDN4-204ENST00000466411 MAPK13O15264 365 aa7.51□□□□□ -1.21
CLDN4-204ENST00000466411 LAMTOR5O43504 91 aa7.51□□□□□ -1.21
CLDN4-204ENST00000466411 NPTXRO95502 500 aa7.51□□□□□ -1.21
CLDN4-204ENST00000466411 CAVIN2O95810 425 aa7.51□□□□□ -1.21
CLDN4-204ENST00000466411 JUNDP17535 347 aa7.51□□□□□ -1.21
CLDN4-204ENST00000466411 LIG1P18858 919 aa7.51□□□□□ -1.21
CLDN4-204ENST00000466411 NMT1P30419 496 aaKnown RBP7.51□□□□□ -1.21
CLDN4-204ENST00000466411 ALDH7A1P49419 539 aaKnown RBP7.51□□□□□ -1.21
CLDN4-204ENST00000466411 AP3M2P53677 418 aa7.51□□□□□ -1.21
CLDN4-204ENST00000466411 RNASELQ05823 741 aaKnown RBP7.51□□□□□ -1.21
CLDN4-204ENST00000466411 FZD5Q13467 585 aa7.51□□□□□ -1.21
CLDN4-204ENST00000466411 KLHL40Q2TBA0 621 aa7.51□□□□□ -1.21
CLDN4-204ENST00000466411 EDRF1Q3B7T1 1238 aa7.51□□□□□ -1.21
CLDN4-204ENST00000466411 MSS51Q4VC12 460 aa7.51□□□□□ -1.21
CLDN4-204ENST00000466411 NOMO2Q5JPE7 1267 aa7.51□□□□□ -1.21
CLDN4-204ENST00000466411 ARMCX5Q6P1M9 558 aa7.51□□□□□ -1.21
CLDN4-204ENST00000466411 TSSK4Q6SA08 328 aa7.51□□□□□ -1.21
CLDN4-204ENST00000466411 GPR149Q86SP6 731 aa7.51□□□□□ -1.21
CLDN4-204ENST00000466411 ZNF598Q86UK7 904 aaKnown RBP7.51□□□□□ -1.21
CLDN4-204ENST00000466411 PDZD3Q86UT5 571 aa7.51□□□□□ -1.21
CLDN4-204ENST00000466411 SLC9A9Q8IVB4 645 aa7.51□□□□□ -1.21
CLDN4-204ENST00000466411 FAM160A2Q8N612 972 aaPredicted RBP7.51□□□□□ -1.21
CLDN4-204ENST00000466411 MLKLQ8NB16 471 aa7.51□□□□□ -1.21
CLDN4-204ENST00000466411 SLC22A17Q8WUG5 538 aa7.51□□□□□ -1.21
CLDN4-204ENST00000466411 STAMQ92783 540 aa7.51□□□□□ -1.21
CLDN4-204ENST00000466411 ACSF2Q96CM8 615 aaPredicted RBP7.51□□□□□ -1.21
CLDN4-204ENST00000466411 DHTKD1Q96HY7 919 aaPredicted RBP7.51□□□□□ -1.21
CLDN4-204ENST00000466411 CPB2Q96IY4 423 aa7.51□□□□□ -1.21
CLDN4-204ENST00000466411 ZNF668Q96K58 619 aaPredicted RBP7.51□□□□□ -1.21
CLDN4-204ENST00000466411 SPSB2Q99619 263 aa7.51□□□□□ -1.21
CLDN4-204ENST00000466411 TMEM175Q9BSA9 504 aa7.51□□□□□ -1.21
CLDN4-204ENST00000466411 KIFC3Q9BVG8 833 aa7.51□□□□□ -1.21
CLDN4-204ENST00000466411 TARS2Q9BW92 718 aaKnown RBP7.51□□□□□ -1.21
CLDN4-204ENST00000466411 BLZF1Q9H2G9 400 aa7.51□□□□□ -1.21
CLDN4-204ENST00000466411 CLSTN2Q9H4D0 955 aa7.51□□□□□ -1.21
CLDN4-204ENST00000466411 PRMT8Q9NR22 394 aaPredicted RBP7.51□□□□□ -1.21
CLDN4-204ENST00000466411 SLC2A4RGQ9NR83 387 aa7.51□□□□□ -1.21
CLDN4-204ENST00000466411 AGO2Q9UKV8 859 aaKnown RBP7.51□□□□□ -1.21
CLDN4-204ENST00000466411 FRMD4BQ9Y2L6 1034 aa7.51□□□□□ -1.21
CLDN4-204ENST00000466411 R3HCC1Q9Y3T6 440 aaKnown RBP7.51□□□□□ -1.21
CLDN4-204ENST00000466411 C2CD2Q9Y426 696 aa7.51□□□□□ -1.21
CLDN4-204ENST00000466411 F5P12259 2224 aa7.5□□□□□ -1.21
CLDN4-204ENST00000466411 ARL5CA6NH57 179 aa7.5□□□□□ -1.21
CLDN4-204ENST00000466411 B4GALT5O43286 388 aa7.5□□□□□ -1.21
CLDN4-204ENST00000466411 TRAPPC3O43617 180 aa7.5□□□□□ -1.21
CLDN4-204ENST00000466411 KLRC4O43908 158 aa7.5□□□□□ -1.21
CLDN4-204ENST00000466411 EXTL3O43909 919 aa7.5□□□□□ -1.21
CLDN4-204ENST00000466411 STX10O60499 249 aa7.5□□□□□ -1.21
CLDN4-204ENST00000466411 MGEA5O60502 916 aa7.5□□□□□ -1.21
CLDN4-204ENST00000466411 GADD45BO75293 160 aaPredicted RBP7.5□□□□□ -1.21
CLDN4-204ENST00000466411 CSDE1O75534 798 aaKnown RBP7.5□□□□□ -1.21
CLDN4-204ENST00000466411 GNA14O95837 355 aa7.5□□□□□ -1.21
CLDN4-204ENST00000466411 THP07101 528 aa7.5□□□□□ -1.21
CLDN4-204ENST00000466411 KCNE1P15382 129 aa7.5□□□□□ -1.21
CLDN4-204ENST00000466411 CYP3A5P20815 502 aa7.5□□□□□ -1.21
CLDN4-204ENST00000466411 FGFR4P22455 802 aa7.5□□□□□ -1.21
CLDN4-204ENST00000466411 MCM4P33991 863 aa7.5□□□□□ -1.21
CLDN4-204ENST00000466411 CREMQ03060 361 aa7.5□□□□□ -1.21
CLDN4-204ENST00000466411 KRT17Q04695 432 aa7.5□□□□□ -1.21
CLDN4-204ENST00000466411 ELAVL2Q12926 359 aaKnown RBP7.5□□□□□ -1.21
CLDN4-204ENST00000466411 PNOCQ13519 176 aa7.5□□□□□ -1.21
CLDN4-204ENST00000466411 NR6A1Q15406 480 aa7.5□□□□□ -1.21
CLDN4-204ENST00000466411 LPAL2Q16609 132 aa7.5□□□□□ -1.21
CLDN4-204ENST00000466411 UBXN11Q5T124 520 aa7.5□□□□□ -1.21
CLDN4-204ENST00000466411 CCDC183Q5T5S1 534 aa7.5□□□□□ -1.21
CLDN4-204ENST00000466411 PDXDC1Q6P996 788 aa7.5□□□□□ -1.21
CLDN4-204ENST00000466411 DCLRE1AQ6PJP8 1040 aa7.5□□□□□ -1.21
CLDN4-204ENST00000466411 TAS1R3Q7RTX0 852 aa7.5□□□□□ -1.21
CLDN4-204ENST00000466411 GPR65Q8IYL9 337 aa7.5□□□□□ -1.21
CLDN4-204ENST00000466411 GPD1LQ8N335 351 aa7.5□□□□□ -1.21
CLDN4-204ENST00000466411 CELF5Q8N6W0 485 aaKnown RBP7.5□□□□□ -1.21
CLDN4-204ENST00000466411 XXYLT1Q8NBI6 393 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms