RNA–Protein interactions for RNA: ENST00000466233.1

CHD3-207, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 4

Gene CHD3, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-207ENST00000466233 SPPL2BQ8TCT7 592 aa14.65□□□□□ -0.06
CHD3-207ENST00000466233 OLFML3Q9NRN5 406 aa14.65□□□□□ -0.06
CHD3-207ENST00000466233 TIMM13Q9Y5L4 95 aaPredicted RBP14.65□□□□□ -0.06
CHD3-207ENST00000466233 A0A1W2PRU2 124 aa14.64□□□□□ -0.07
CHD3-207ENST00000466233 KIAA0391O15091 583 aaKnown RBP14.64□□□□□ -0.07
CHD3-207ENST00000466233 LDHAP00338 332 aaKnown RBP14.64□□□□□ -0.07
CHD3-207ENST00000466233 NFICP08651 508 aa14.64□□□□□ -0.07
CHD3-207ENST00000466233 CHRNB1P11230 501 aa14.64□□□□□ -0.07
CHD3-207ENST00000466233 CDC25CP30307 473 aa14.64□□□□□ -0.07
CHD3-207ENST00000466233 NMT1P30419 496 aaKnown RBP14.64□□□□□ -0.07
CHD3-207ENST00000466233 CNR2P34972 360 aa14.64□□□□□ -0.07
CHD3-207ENST00000466233 TXLNAP40222 546 aa14.64□□□□□ -0.07
CHD3-207ENST00000466233 MTAPQ13126 283 aa14.64□□□□□ -0.07
CHD3-207ENST00000466233 LRRC32Q14392 662 aa14.64□□□□□ -0.07
CHD3-207ENST00000466233 GRM2Q14416 872 aa14.64□□□□□ -0.07
CHD3-207ENST00000466233 DGKKQ5KSL6 1271 aa14.64□□□□□ -0.07
CHD3-207ENST00000466233 GAREM2Q75VX8 874 aa14.64□□□□□ -0.07
CHD3-207ENST00000466233 ARID3BQ8IVW6 561 aaPredicted RBP14.64□□□□□ -0.07
CHD3-207ENST00000466233 YAF2Q8IY57 180 aa14.64□□□□□ -0.07
CHD3-207ENST00000466233 DCP1BQ8IZD4 617 aaKnown RBP14.64□□□□□ -0.07
CHD3-207ENST00000466233 SPEM1Q8N4L4 309 aa14.64□□□□□ -0.07
CHD3-207ENST00000466233 CELF5Q8N6W0 485 aaKnown RBP14.64□□□□□ -0.07
CHD3-207ENST00000466233 ATAD1Q8NBU5 361 aa14.64□□□□□ -0.07
CHD3-207ENST00000466233 CSGALNACT1Q8TDX6 532 aa14.64□□□□□ -0.07
CHD3-207ENST00000466233 MKNK1Q9BUB5 465 aa14.64□□□□□ -0.07
CHD3-207ENST00000466233 CRISPLD1Q9H336 500 aa14.64□□□□□ -0.07
CHD3-207ENST00000466233 SLITRK6Q9H5Y7 841 aa14.64□□□□□ -0.07
CHD3-207ENST00000466233 TASP1Q9H6P5 420 aa14.64□□□□□ -0.07
CHD3-207ENST00000466233 DPP3Q9NY33 737 aa14.64□□□□□ -0.07
CHD3-207ENST00000466233 PCDHB13Q9Y5F0 798 aa14.64□□□□□ -0.07
CHD3-207ENST00000466233 WDR87Q6ZQQ6 2873 aa14.64□□□□□ -0.07
CHD3-207ENST00000466233 PATJQ8NI35 1801 aa14.64□□□□□ -0.07
CHD3-207ENST00000466233 MYBPHLA2RUH7 354 aa14.63□□□□□ -0.07
CHD3-207ENST00000466233 PRR5-ARHGAP8B1AHC4 643 aa14.63□□□□□ -0.07
CHD3-207ENST00000466233 ANKRD63C9JTQ0 380 aa14.63□□□□□ -0.07
CHD3-207ENST00000466233 CYB561D2O14569 222 aa14.63□□□□□ -0.07
CHD3-207ENST00000466233 LRP3O75074 770 aa14.63□□□□□ -0.07
CHD3-207ENST00000466233 OR4Q2P0C623 313 aa14.63□□□□□ -0.07
CHD3-207ENST00000466233 GARTP22102 1010 aa14.63□□□□□ -0.07
CHD3-207ENST00000466233 DDX6P26196 483 aaKnown RBP eCLIP14.63□□□□□ -0.07
CHD3-207ENST00000466233 VIPR2P41587 438 aa14.63□□□□□ -0.07
CHD3-207ENST00000466233 ACOT2P49753 483 aa14.63□□□□□ -0.07
CHD3-207ENST00000466233 ARHGAP8P85298 464 aa14.63□□□□□ -0.07
CHD3-207ENST00000466233 GRIN1Q05586 938 aa14.63□□□□□ -0.07
CHD3-207ENST00000466233 DHX8Q14562 1220 aaKnown RBP14.63□□□□□ -0.07
CHD3-207ENST00000466233 NFE2Q16621 373 aaPredicted RBP14.63□□□□□ -0.07
CHD3-207ENST00000466233 SV2CQ496J9 727 aa14.63□□□□□ -0.07
CHD3-207ENST00000466233 CRELD2Q6UXH1 353 aaPredicted RBP14.63□□□□□ -0.07
CHD3-207ENST00000466233 CCDC73Q6ZRK6 1079 aa14.63□□□□□ -0.07
CHD3-207ENST00000466233 SV2BQ7L1I2 683 aa14.63□□□□□ -0.07
CHD3-207ENST00000466233 OR10T2Q8NGX3 314 aa14.63□□□□□ -0.07
CHD3-207ENST00000466233 LEO1Q8WVC0 666 aaPredicted RBP14.63□□□□□ -0.07
CHD3-207ENST00000466233 INTS4Q96HW7 963 aaKnown RBP14.63□□□□□ -0.07
CHD3-207ENST00000466233 ZNF560Q96MR9 790 aa14.63□□□□□ -0.07
CHD3-207ENST00000466233 PGLYRP2Q96PD5 576 aa14.63□□□□□ -0.07
CHD3-207ENST00000466233 ZHX3Q9H4I2 956 aa14.63□□□□□ -0.07
CHD3-207ENST00000466233 LMAN1LQ9HAT1 526 aa14.63□□□□□ -0.07
CHD3-207ENST00000466233 ABCB6Q9NP58 842 aa14.63□□□□□ -0.07
CHD3-207ENST00000466233 DCHS1Q96JQ0 3298 aa14.63□□□□□ -0.07
CHD3-207ENST00000466233 FRMD3A2A2Y4 597 aa14.62□□□□□ -0.07
CHD3-207ENST00000466233 KPNA7A9QM74 516 aa14.62□□□□□ -0.07
CHD3-207ENST00000466233 NRG2O14511 850 aaPredicted RBP14.62□□□□□ -0.07
CHD3-207ENST00000466233 DPYSL4O14531 572 aa14.62□□□□□ -0.07
CHD3-207ENST00000466233 PPEF2O14830 753 aa14.62□□□□□ -0.07
CHD3-207ENST00000466233 FOXD2O60548 495 aaPredicted RBP14.62□□□□□ -0.07
CHD3-207ENST00000466233 ADSSP30520 456 aa14.62□□□□□ -0.07
CHD3-207ENST00000466233 CXCL12P48061 93 aa14.62□□□□□ -0.07
CHD3-207ENST00000466233 ZC2HC1CQ53FD0 456 aaPredicted RBP14.62□□□□□ -0.07
CHD3-207ENST00000466233 L1TD1Q5T7N2 865 aaKnown RBP14.62□□□□□ -0.07
CHD3-207ENST00000466233 RRAGBQ5VZM2 374 aa14.62□□□□□ -0.07
CHD3-207ENST00000466233 KIAA2013Q8IYS2 634 aa14.62□□□□□ -0.07
CHD3-207ENST00000466233 TMEM86AQ8N2M4 240 aa14.62□□□□□ -0.07
CHD3-207ENST00000466233 LRRC52Q8N7C0 313 aa14.62□□□□□ -0.07
CHD3-207ENST00000466233 CACTINQ8WUQ7 758 aaKnown RBP14.62□□□□□ -0.07
CHD3-207ENST00000466233 POMGNT1Q8WZA1 660 aa14.62□□□□□ -0.07
CHD3-207ENST00000466233 DNAJC19Q96DA6 116 aa14.62□□□□□ -0.07
CHD3-207ENST00000466233 RMDN1Q96DB5 314 aa14.62□□□□□ -0.07
CHD3-207ENST00000466233 FAM212AQ96EL1 285 aa14.62□□□□□ -0.07
CHD3-207ENST00000466233 EPSTI1Q96J88 318 aa14.62□□□□□ -0.07
CHD3-207ENST00000466233 CEP295NLQ96MC4 621 aa14.62□□□□□ -0.07
CHD3-207ENST00000466233 GCNAQ96QF7 691 aa14.62□□□□□ -0.07
CHD3-207ENST00000466233 ACCSQ96QU6 501 aa14.62□□□□□ -0.07
CHD3-207ENST00000466233 HINFPQ9BQA5 517 aa14.62□□□□□ -0.07
CHD3-207ENST00000466233 ATXN3LQ9H3M9 355 aa14.62□□□□□ -0.07
CHD3-207ENST00000466233 THG1LQ9NWX6 298 aaKnown RBP14.62□□□□□ -0.07
CHD3-207ENST00000466233 NCDNQ9UBB6 729 aa14.62□□□□□ -0.07
CHD3-207ENST00000466233 FBXO2Q9UK22 296 aaPredicted RBP14.62□□□□□ -0.07
CHD3-207ENST00000466233 SLC27A5Q9Y2P5 690 aa14.62□□□□□ -0.07
CHD3-207ENST00000466233 HAPLN1P10915 354 aaPredicted RBP14.61□□□□□ -0.07
CHD3-207ENST00000466233 PDIA4P13667 645 aaKnown RBP14.61□□□□□ -0.07
CHD3-207ENST00000466233 GJA1P17302 382 aa14.61□□□□□ -0.07
CHD3-207ENST00000466233 CCNE1P24864 410 aa14.61□□□□□ -0.07
CHD3-207ENST00000466233 GABRR2P28476 465 aa14.61□□□□□ -0.07
CHD3-207ENST00000466233 GUCY2FP51841 1108 aa14.61□□□□□ -0.07
CHD3-207ENST00000466233 LMNB2Q03252 620 aa14.61□□□□□ -0.07
CHD3-207ENST00000466233 SLC39A12Q504Y0 691 aa14.61□□□□□ -0.07
CHD3-207ENST00000466233 SFR1Q86XK3 245 aa14.61□□□□□ -0.07
CHD3-207ENST00000466233 BRSK2Q8IWQ3 736 aa14.61□□□□□ -0.07
CHD3-207ENST00000466233 BPIFB1Q8TDL5 484 aa14.61□□□□□ -0.07
CHD3-207ENST00000466233 ACBD6Q9BR61 282 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms