RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 GPSM2P81274 684 aa5.42□□□□□ -1.54
LRCH3-211ENST00000466054 GRM3Q14832 879 aa5.42□□□□□ -1.54
LRCH3-211ENST00000466054 ZNF169Q14929 603 aaPredicted RBP5.42□□□□□ -1.54
LRCH3-211ENST00000466054 UBXN2BQ14CS0 331 aa5.42□□□□□ -1.54
LRCH3-211ENST00000466054 SPDYE7PQ495Y7 208 aa5.42□□□□□ -1.54
LRCH3-211ENST00000466054 FLYWCH1Q4VC44 716 aa5.42□□□□□ -1.54
LRCH3-211ENST00000466054 CCSAPQ6IQ19 270 aaPredicted RBP5.42□□□□□ -1.54
LRCH3-211ENST00000466054 DAAM2Q86T65 1068 aa5.42□□□□□ -1.54
LRCH3-211ENST00000466054 FAM43AQ8N2R8 423 aa5.42□□□□□ -1.54
LRCH3-211ENST00000466054 PPP1R35Q8TAP8 253 aa5.42□□□□□ -1.54
LRCH3-211ENST00000466054 TTC17Q96AE7 1141 aa5.42□□□□□ -1.54
LRCH3-211ENST00000466054 ADAM2Q99965 735 aa5.42□□□□□ -1.54
LRCH3-211ENST00000466054 MYOCQ99972 504 aa5.42□□□□□ -1.54
LRCH3-211ENST00000466054 PACSIN1Q9BY11 444 aa5.42□□□□□ -1.54
LRCH3-211ENST00000466054 ALOXE3Q9BYJ1 711 aa5.42□□□□□ -1.54
LRCH3-211ENST00000466054 USP15Q9Y4E8 981 aaPredicted RBP5.42□□□□□ -1.54
LRCH3-211ENST00000466054 COL11A2P13942 1736 aaPredicted RBP5.42□□□□□ -1.54
LRCH3-211ENST00000466054 MAST3O60307 1309 aa5.42□□□□□ -1.54
LRCH3-211ENST00000466054 FRMPD2Q68DX3 1309 aaPredicted RBP5.42□□□□□ -1.54
LRCH3-211ENST00000466054 COL3A1P02461 1466 aaPredicted RBP5.41□□□□□ -1.54
LRCH3-211ENST00000466054 WDR91A4D1P6 747 aa5.41□□□□□ -1.54
LRCH3-211ENST00000466054 LRRC3CA6NJW4 275 aa5.41□□□□□ -1.54
LRCH3-211ENST00000466054 H3BUI4 141 aa5.41□□□□□ -1.54
LRCH3-211ENST00000466054 F2RL2O00254 374 aa5.41□□□□□ -1.54
LRCH3-211ENST00000466054 KIAA0391O15091 583 aaKnown RBP5.41□□□□□ -1.54
LRCH3-211ENST00000466054 CAND2O75155 1236 aa5.41□□□□□ -1.54
LRCH3-211ENST00000466054 SLC43A1O75387 559 aa5.41□□□□□ -1.54
LRCH3-211ENST00000466054 CDKL5O76039 1030 aa5.41□□□□□ -1.54
LRCH3-211ENST00000466054 HAUS5O94927 633 aa5.41□□□□□ -1.54
LRCH3-211ENST00000466054 ZBED1O96006 694 aa5.41□□□□□ -1.54
LRCH3-211ENST00000466054 PRDX5P30044 214 aa5.41□□□□□ -1.54
LRCH3-211ENST00000466054 GNALP38405 381 aa5.41□□□□□ -1.54
LRCH3-211ENST00000466054 TBX4P57082 545 aa5.41□□□□□ -1.54
LRCH3-211ENST00000466054 SIM1P81133 766 aaPredicted RBP5.41□□□□□ -1.54
LRCH3-211ENST00000466054 FGL2Q14314 439 aa5.41□□□□□ -1.54
LRCH3-211ENST00000466054 AKNAD1Q5T1N1 836 aa5.41□□□□□ -1.54
LRCH3-211ENST00000466054 FAM90A1Q86YD7 464 aa5.41□□□□□ -1.54
LRCH3-211ENST00000466054 KIAA0319LQ8IZA0 1049 aa5.41□□□□□ -1.54
LRCH3-211ENST00000466054 BRIX1Q8TDN6 353 aaKnown RBP5.41□□□□□ -1.54
LRCH3-211ENST00000466054 SLC35A4Q96G79 324 aa5.41□□□□□ -1.54
LRCH3-211ENST00000466054 B3GNT5Q9BYG0 378 aa5.41□□□□□ -1.54
LRCH3-211ENST00000466054 RLIMQ9NVW2 624 aa5.41□□□□□ -1.54
LRCH3-211ENST00000466054 JKAMPQ9P055 326 aa5.41□□□□□ -1.54
LRCH3-211ENST00000466054 DDX20Q9UHI6 824 aaKnown RBP5.41□□□□□ -1.54
LRCH3-211ENST00000466054 ZDHHC8Q9ULC8 765 aa5.41□□□□□ -1.54
LRCH3-211ENST00000466054 TCRBV7S2A1N4TA0A589 114 aa5.4□□□□□ -1.54
LRCH3-211ENST00000466054 CAPN8A6NHC0 703 aa5.4□□□□□ -1.54
LRCH3-211ENST00000466054 DRGXA6NNA5 263 aa5.4□□□□□ -1.54
LRCH3-211ENST00000466054 ANXA1P04083 346 aa5.4□□□□□ -1.54
LRCH3-211ENST00000466054 GNAI3P08754 354 aa5.4□□□□□ -1.54
LRCH3-211ENST00000466054 PIK3CGP48736 1102 aa5.4□□□□□ -1.54
LRCH3-211ENST00000466054 CACNB3P54284 484 aa5.4□□□□□ -1.54
LRCH3-211ENST00000466054 CACNA2D1P54289 1103 aa5.4□□□□□ -1.54
LRCH3-211ENST00000466054 RAB1AP62820 205 aa5.4□□□□□ -1.54
LRCH3-211ENST00000466054 GNAI1P63096 354 aa5.4□□□□□ -1.54
LRCH3-211ENST00000466054 MRPS35P82673 323 aaKnown RBP5.4□□□□□ -1.54
LRCH3-211ENST00000466054 PLS1Q14651 629 aa5.4□□□□□ -1.54
LRCH3-211ENST00000466054 NPNTQ6UXI9 565 aa5.4□□□□□ -1.54
LRCH3-211ENST00000466054 NOL8Q76FK4 1167 aaKnown RBP5.4□□□□□ -1.54
LRCH3-211ENST00000466054 UBE3BQ7Z3V4 1068 aa5.4□□□□□ -1.54
LRCH3-211ENST00000466054 PDSS2Q86YH6 399 aa5.4□□□□□ -1.54
LRCH3-211ENST00000466054 FITM2Q8N6M3 262 aa5.4□□□□□ -1.54
LRCH3-211ENST00000466054 AOPEPQ8N6M6 819 aa5.4□□□□□ -1.54
LRCH3-211ENST00000466054 RNF169Q8NCN4 708 aa5.4□□□□□ -1.54
LRCH3-211ENST00000466054 Q96MF0 132 aa5.4□□□□□ -1.54
LRCH3-211ENST00000466054 HEPHQ9BQS7 1158 aa5.4□□□□□ -1.54
LRCH3-211ENST00000466054 REXO4Q9GZR2 422 aaKnown RBP5.4□□□□□ -1.54
LRCH3-211ENST00000466054 MRPL46Q9H2W6 279 aaKnown RBP5.4□□□□□ -1.54
LRCH3-211ENST00000466054 SARS2Q9NP81 518 aaKnown RBP5.4□□□□□ -1.54
LRCH3-211ENST00000466054 FBXO34Q9NWN3 711 aa5.4□□□□□ -1.54
LRCH3-211ENST00000466054 ZNF70Q9UC06 446 aaPredicted RBP5.4□□□□□ -1.54
LRCH3-211ENST00000466054 L1RE1Q9UN81 338 aa5.4□□□□□ -1.54
LRCH3-211ENST00000466054 PROP1O75360 226 aa5.39□□□□□ -1.55
LRCH3-211ENST00000466054 SBK3P0C264 359 aa5.39□□□□□ -1.55
LRCH3-211ENST00000466054 RARRES1P49788 294 aa5.39□□□□□ -1.55
LRCH3-211ENST00000466054 FAM193AP78312 1265 aa5.39□□□□□ -1.55
LRCH3-211ENST00000466054 CCDC93Q567U6 631 aa5.39□□□□□ -1.55
LRCH3-211ENST00000466054 CYB5RLQ6IPT4 315 aa5.39□□□□□ -1.55
LRCH3-211ENST00000466054 Q6ZNX1 250 aa5.39□□□□□ -1.55
LRCH3-211ENST00000466054 ZNF365Q70YC5 407 aa5.39□□□□□ -1.55
LRCH3-211ENST00000466054 MAEAQ7L5Y9 396 aa5.39□□□□□ -1.55
LRCH3-211ENST00000466054 PLBD2Q8NHP8 589 aa5.39□□□□□ -1.55
LRCH3-211ENST00000466054 GSTO2Q9H4Y5 243 aa5.39□□□□□ -1.55
LRCH3-211ENST00000466054 CNNM1Q9NRU3 951 aa5.39□□□□□ -1.55
LRCH3-211ENST00000466054 CFAP97Q9P2B7 532 aa5.39□□□□□ -1.55
LRCH3-211ENST00000466054 SLC17A6Q9P2U8 582 aa5.39□□□□□ -1.55
LRCH3-211ENST00000466054 NOX1Q9Y5S8 564 aa5.39□□□□□ -1.55
LRCH3-211ENST00000466054 SALL3Q9BXA9 1300 aa5.39□□□□□ -1.55
LRCH3-211ENST00000466054 A6NNZ2 444 aa5.38□□□□□ -1.55
LRCH3-211ENST00000466054 TPP1O14773 563 aa5.38□□□□□ -1.55
LRCH3-211ENST00000466054 CBSLP0DN79 551 aa5.38□□□□□ -1.55
LRCH3-211ENST00000466054 MYBP10242 640 aa5.38□□□□□ -1.55
LRCH3-211ENST00000466054 RHCEP18577 417 aa5.38□□□□□ -1.55
LRCH3-211ENST00000466054 GCSHP23434 173 aa5.38□□□□□ -1.55
LRCH3-211ENST00000466054 CBSP35520 551 aa5.38□□□□□ -1.55
LRCH3-211ENST00000466054 CHN2P52757 468 aa5.38□□□□□ -1.55
LRCH3-211ENST00000466054 RHDQ02161 417 aa5.38□□□□□ -1.55
LRCH3-211ENST00000466054 KIF22Q14807 665 aa5.38□□□□□ -1.55
LRCH3-211ENST00000466054 SRSF7Q16629 238 aaKnown RBP eCLIP5.38□□□□□ -1.55
LRCH3-211ENST00000466054 EMC10Q5UCC4 262 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms