RNA–Protein interactions for RNA: ENST00000465842.1

CHKB-204, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 428 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-204ENST00000465842 SCARA3Q6AZY7 606 aa20.3■□□□□ 0.84
CHKB-204ENST00000465842 DCP1BQ8IZD4 617 aaKnown RBP20.3■□□□□ 0.84
CHKB-204ENST00000465842 ADGRF2Q8IZF7 708 aa20.3■□□□□ 0.84
CHKB-204ENST00000465842 TMEM86AQ8N2M4 240 aa20.3■□□□□ 0.84
CHKB-204ENST00000465842 CXorf38Q8TB03 319 aa20.3■□□□□ 0.84
CHKB-204ENST00000465842 EDAQ92838 391 aa20.3■□□□□ 0.84
CHKB-204ENST00000465842 ZNF512Q96ME7 567 aaPredicted RBP20.3■□□□□ 0.84
CHKB-204ENST00000465842 ZCWPW1Q9H0M4 648 aa20.3■□□□□ 0.84
CHKB-204ENST00000465842 GDAP2Q9NXN4 497 aa20.3■□□□□ 0.84
CHKB-204ENST00000465842 DNMT3BQ9UBC3 853 aaKnown RBP20.3■□□□□ 0.84
CHKB-204ENST00000465842 L1RE1Q9UN81 338 aa20.3■□□□□ 0.84
CHKB-204ENST00000465842 MRPS23Q9Y3D9 190 aaKnown RBP20.3■□□□□ 0.84
CHKB-204ENST00000465842 YIPF1Q9Y548 306 aa20.3■□□□□ 0.84
CHKB-204ENST00000465842 PCDHA5Q9Y5H7 936 aa20.3■□□□□ 0.84
CHKB-204ENST00000465842 N4BP1O75113 896 aaKnown RBP20.29■□□□□ 0.84
CHKB-204ENST00000465842 RHOP08100 348 aa20.29■□□□□ 0.84
CHKB-204ENST00000465842 ALDH1A3P47895 512 aa20.29■□□□□ 0.84
CHKB-204ENST00000465842 CDR1P51861 262 aa20.29■□□□□ 0.84
CHKB-204ENST00000465842 ZNF658Q5TYW1 1059 aaPredicted RBP20.29■□□□□ 0.84
CHKB-204ENST00000465842 TOP6BLQ8N6T0 577 aa20.29■□□□□ 0.84
CHKB-204ENST00000465842 ATAD1Q8NBU5 361 aa20.29■□□□□ 0.84
CHKB-204ENST00000465842 MMS19Q96T76 1030 aa20.29■□□□□ 0.84
CHKB-204ENST00000465842 SEPT5Q99719 369 aaPredicted RBP20.29■□□□□ 0.84
CHKB-204ENST00000465842 GTPBP4Q9BZE4 634 aaKnown RBP20.29■□□□□ 0.84
CHKB-204ENST00000465842 DDX43Q9NXZ2 648 aaKnown RBP20.29■□□□□ 0.84
CHKB-204ENST00000465842 SLC27A5Q9Y2P5 690 aa20.29■□□□□ 0.84
CHKB-204ENST00000465842 LRRIQ3A6PVS8 624 aaPredicted RBP20.28■□□□□ 0.84
CHKB-204ENST00000465842 GPR37L1O60883 481 aa20.28■□□□□ 0.84
CHKB-204ENST00000465842 AP3M2P53677 418 aa20.28■□□□□ 0.84
CHKB-204ENST00000465842 EPHB3P54753 998 aa20.28■□□□□ 0.84
CHKB-204ENST00000465842 TNNC1P63316 161 aa20.28■□□□□ 0.84
CHKB-204ENST00000465842 CYP4A22Q5TCH4 519 aa20.28■□□□□ 0.84
CHKB-204ENST00000465842 CENPPQ6IPU0 288 aa20.28■□□□□ 0.84
CHKB-204ENST00000465842 PDZD4Q76G19 769 aaPredicted RBP20.28■□□□□ 0.84
CHKB-204ENST00000465842 ITFG1Q8TB96 612 aa20.28■□□□□ 0.84
CHKB-204ENST00000465842 FAM200AQ8TCP9 573 aa20.28■□□□□ 0.84
CHKB-204ENST00000465842 PARD3BQ8TEW8 1205 aa20.28■□□□□ 0.84
CHKB-204ENST00000465842 TMEM174Q8WUU8 243 aa20.28■□□□□ 0.84
CHKB-204ENST00000465842 ING5Q8WYH8 240 aa20.28■□□□□ 0.84
CHKB-204ENST00000465842 ZNF516Q92618 1163 aa20.28■□□□□ 0.84
CHKB-204ENST00000465842 TSG101Q99816 390 aa20.28■□□□□ 0.84
CHKB-204ENST00000465842 RTP3Q9BQQ7 232 aa20.28■□□□□ 0.84
CHKB-204ENST00000465842 EPS15L1Q9UBC2 864 aa20.28■□□□□ 0.84
CHKB-204ENST00000465842 CDH7Q9ULB5 785 aa20.28■□□□□ 0.84
CHKB-204ENST00000465842 ZFP37Q9Y6Q3 630 aaPredicted RBP20.28■□□□□ 0.84
CHKB-204ENST00000465842 NCOR1O75376 2440 aa20.27■□□□□ 0.84
CHKB-204ENST00000465842 VNN2O95498 520 aa20.27■□□□□ 0.84
CHKB-204ENST00000465842 LAMP2P13473 410 aa20.27■□□□□ 0.84
CHKB-204ENST00000465842 KRT13P13646 458 aa20.27■□□□□ 0.84
CHKB-204ENST00000465842 ACAT1P24752 427 aaKnown RBP20.27■□□□□ 0.84
CHKB-204ENST00000465842 LHX1P48742 406 aa20.27■□□□□ 0.84
CHKB-204ENST00000465842 UBE2HP62256 183 aa20.27■□□□□ 0.84
CHKB-204ENST00000465842 ADAM9Q13443 819 aa20.27■□□□□ 0.84
CHKB-204ENST00000465842 STIM1Q13586 685 aa20.27■□□□□ 0.84
CHKB-204ENST00000465842 MGAT5BQ3V5L5 792 aa20.27■□□□□ 0.84
CHKB-204ENST00000465842 FAM186BQ8IYM0 893 aa20.27■□□□□ 0.84
CHKB-204ENST00000465842 UBALD2Q8IYN6 164 aa20.27■□□□□ 0.84
CHKB-204ENST00000465842 PLEKHO2Q8TD55 490 aa20.27■□□□□ 0.84
CHKB-204ENST00000465842 FGF13Q92913 245 aa20.27■□□□□ 0.84
CHKB-204ENST00000465842 LRFN3Q9BTN0 628 aa20.27■□□□□ 0.84
CHKB-204ENST00000465842 KCNK12Q9HB15 430 aa20.27■□□□□ 0.84
CHKB-204ENST00000465842 ASAH2Q9NR71 780 aa20.27■□□□□ 0.84
CHKB-204ENST00000465842 ABI2Q9NYB9 513 aaPredicted RBP20.27■□□□□ 0.84
CHKB-204ENST00000465842 IGSF9Q9P2J2 1179 aa20.27■□□□□ 0.84
CHKB-204ENST00000465842 BDP1A6H8Y1 2624 aa20.27■□□□□ 0.84
CHKB-204ENST00000465842 ZNF197O14709 1029 aa20.26■□□□□ 0.83
CHKB-204ENST00000465842 CST3P01034 146 aaPredicted RBP20.26■□□□□ 0.83
CHKB-204ENST00000465842 MYL4P12829 197 aa20.26■□□□□ 0.83
CHKB-204ENST00000465842 PCSK1P29120 753 aa20.26■□□□□ 0.83
CHKB-204ENST00000465842 PRCPP42785 496 aa20.26■□□□□ 0.83
CHKB-204ENST00000465842 TUFMP49411 452 aaKnown RBP20.26■□□□□ 0.83
CHKB-204ENST00000465842 MYL6P60660 151 aa20.26■□□□□ 0.83
CHKB-204ENST00000465842 SIGLEC14Q08ET2 396 aa20.26■□□□□ 0.83
CHKB-204ENST00000465842 SMARCB1Q12824 385 aa20.26■□□□□ 0.83
CHKB-204ENST00000465842 VEPH1Q14D04 833 aa20.26■□□□□ 0.83
CHKB-204ENST00000465842 NFIL3Q16649 462 aa20.26■□□□□ 0.83
CHKB-204ENST00000465842 SOWAHAQ2M3V2 549 aa20.26■□□□□ 0.83
CHKB-204ENST00000465842 WDR72Q3MJ13 1102 aa20.26■□□□□ 0.83
CHKB-204ENST00000465842 ISM2Q6H9L7 571 aa20.26■□□□□ 0.83
CHKB-204ENST00000465842 TRIM67Q6ZTA4 783 aa20.26■□□□□ 0.83
CHKB-204ENST00000465842 DPH6Q7L8W6 267 aa20.26■□□□□ 0.83
CHKB-204ENST00000465842 TTC9BQ8N6N2 239 aa20.26■□□□□ 0.83
CHKB-204ENST00000465842 SPATA18Q8TC71 538 aa20.26■□□□□ 0.83
CHKB-204ENST00000465842 TMC2Q8TDI7 906 aa20.26■□□□□ 0.83
CHKB-204ENST00000465842 C2orf15Q8WU43 125 aaKnown RBP20.26■□□□□ 0.83
CHKB-204ENST00000465842 SYAP1Q96A49 352 aaPredicted RBP20.26■□□□□ 0.83
CHKB-204ENST00000465842 ACBD6Q9BR61 282 aa20.26■□□□□ 0.83
CHKB-204ENST00000465842 GZF1Q9H116 711 aaPredicted RBP20.26■□□□□ 0.83
CHKB-204ENST00000465842 CRISPLD1Q9H336 500 aa20.26■□□□□ 0.83
CHKB-204ENST00000465842 C11orf16Q9NQ32 467 aa20.26■□□□□ 0.83
CHKB-204ENST00000465842 CEP72Q9P209 647 aa20.26■□□□□ 0.83
CHKB-204ENST00000465842 TMEM221A6NGB7 291 aa20.25■□□□□ 0.83
CHKB-204ENST00000465842 PRR33A8MZF0 331 aa20.25■□□□□ 0.83
CHKB-204ENST00000465842 M0R296 226 aa20.25■□□□□ 0.83
CHKB-204ENST00000465842 SOAT2O75908 522 aa20.25■□□□□ 0.83
CHKB-204ENST00000465842 ATICP31939 592 aa20.25■□□□□ 0.83
CHKB-204ENST00000465842 PSMC2P35998 433 aaKnown RBP20.25■□□□□ 0.83
CHKB-204ENST00000465842 VAMP7P51809 220 aa20.25■□□□□ 0.83
CHKB-204ENST00000465842 DLG4P78352 724 aa20.25■□□□□ 0.83
CHKB-204ENST00000465842 TDGQ13569 410 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms