RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 USP15Q9Y4E8 981 aaPredicted RBP21.82■■□□□ 1.08
SKA3-205ENST00000465471 DENND4AQ7Z401 1863 aa21.81■■□□□ 1.08
SKA3-205ENST00000465471 STX10O60499 249 aa21.81■■□□□ 1.08
SKA3-205ENST00000465471 VNN2O95498 520 aa21.81■■□□□ 1.08
SKA3-205ENST00000465471 ASS1P00966 412 aaKnown RBP21.81■■□□□ 1.08
SKA3-205ENST00000465471 HLA-DRAP01903 254 aa21.81■■□□□ 1.08
SKA3-205ENST00000465471 ATF2P15336 505 aa21.81■■□□□ 1.08
SKA3-205ENST00000465471 ERCC5P28715 1186 aaPredicted RBP21.81■■□□□ 1.08
SKA3-205ENST00000465471 GPR17Q13304 367 aa21.81■■□□□ 1.08
SKA3-205ENST00000465471 TJAP1Q5JTD0 557 aa21.81■■□□□ 1.08
SKA3-205ENST00000465471 KRT39Q6A163 491 aa21.81■■□□□ 1.08
SKA3-205ENST00000465471 RTL10Q7L3V2 364 aa21.81■■□□□ 1.08
SKA3-205ENST00000465471 OSTM1Q86WC4 334 aa21.81■■□□□ 1.08
SKA3-205ENST00000465471 ADGRF2Q8IZF7 708 aa21.81■■□□□ 1.08
SKA3-205ENST00000465471 FEZF2Q8TBJ5 459 aa21.81■■□□□ 1.08
SKA3-205ENST00000465471 TAS1R2Q8TE23 839 aa21.81■■□□□ 1.08
SKA3-205ENST00000465471 TAF4BQ92750 862 aa21.81■■□□□ 1.08
SKA3-205ENST00000465471 TMEM209Q96SK2 561 aa21.81■■□□□ 1.08
SKA3-205ENST00000465471 SRRTQ9BXP5 876 aaKnown RBP21.81■■□□□ 1.08
SKA3-205ENST00000465471 ZCWPW1Q9H0M4 648 aa21.81■■□□□ 1.08
SKA3-205ENST00000465471 ZDHHC7Q9NXF8 308 aa21.81■■□□□ 1.08
SKA3-205ENST00000465471 DACH1Q9UI36 760 aa21.81■■□□□ 1.08
SKA3-205ENST00000465471 MAFFQ9ULX9 164 aa21.81■■□□□ 1.08
SKA3-205ENST00000465471 C5orf42Q9H799 3197 aa21.81■■□□□ 1.08
SKA3-205ENST00000465471 TACC1O75410 805 aa21.8■■□□□ 1.08
SKA3-205ENST00000465471 ZMYND10O75800 440 aa21.8■■□□□ 1.08
SKA3-205ENST00000465471 GNA14O95837 355 aa21.8■■□□□ 1.08
SKA3-205ENST00000465471 FAM163BP0C2L3 166 aa21.8■■□□□ 1.08
SKA3-205ENST00000465471 OR4Q2P0C623 313 aa21.8■■□□□ 1.08
SKA3-205ENST00000465471 HOXA9P31269 272 aa21.8■■□□□ 1.08
SKA3-205ENST00000465471 MXI1P50539 228 aa21.8■■□□□ 1.08
SKA3-205ENST00000465471 SGSM1Q2NKQ1 1148 aa21.8■■□□□ 1.08
SKA3-205ENST00000465471 KLHL40Q2TBA0 621 aa21.8■■□□□ 1.08
SKA3-205ENST00000465471 ZNF699Q32M78 642 aa21.8■■□□□ 1.08
SKA3-205ENST00000465471 WDR72Q3MJ13 1102 aa21.8■■□□□ 1.08
SKA3-205ENST00000465471 RARS2Q5T160 578 aaKnown RBP21.8■■□□□ 1.08
SKA3-205ENST00000465471 TRIM59Q8IWR1 403 aa21.8■■□□□ 1.08
SKA3-205ENST00000465471 TCEAL8Q8IYN2 117 aa21.8■■□□□ 1.08
SKA3-205ENST00000465471 ZNF707Q96C28 371 aaPredicted RBP21.8■■□□□ 1.08
SKA3-205ENST00000465471 AFF4Q9UHB7 1163 aaKnown RBP21.8■■□□□ 1.08
SKA3-205ENST00000465471 COQ4Q9Y3A0 265 aa21.8■■□□□ 1.08
SKA3-205ENST00000465471 RFPL2O75678 378 aa21.79■■□□□ 1.08
SKA3-205ENST00000465471 C8AP07357 584 aa21.79■■□□□ 1.08
SKA3-205ENST00000465471 POU2F2P09086 479 aa21.79■■□□□ 1.08
SKA3-205ENST00000465471 CPB1P15086 417 aa21.79■■□□□ 1.08
SKA3-205ENST00000465471 IL9P15248 144 aa21.79■■□□□ 1.08
SKA3-205ENST00000465471 PTMSP20962 102 aa21.79■■□□□ 1.08
SKA3-205ENST00000465471 WARSP23381 471 aaKnown RBP21.79■■□□□ 1.08
SKA3-205ENST00000465471 PIK3CAP42336 1068 aa21.79■■□□□ 1.08
SKA3-205ENST00000465471 LHX1P48742 406 aa21.79■■□□□ 1.08
SKA3-205ENST00000465471 ARPP19P56211 112 aa21.79■■□□□ 1.08
SKA3-205ENST00000465471 UVSSAQ2YD98 709 aa21.79■■□□□ 1.08
SKA3-205ENST00000465471 CCDC40Q4G0X9 1142 aa21.79■■□□□ 1.08
SKA3-205ENST00000465471 CBWD6Q4V339 395 aa21.79■■□□□ 1.08
SKA3-205ENST00000465471 DCAF17Q5H9S7 520 aaPredicted RBP21.79■■□□□ 1.08
SKA3-205ENST00000465471 CBWD3Q5JTY5 395 aa21.79■■□□□ 1.08
SKA3-205ENST00000465471 CBWD5Q5RIA9 395 aa21.79■■□□□ 1.08
SKA3-205ENST00000465471 CYP26C1Q6V0L0 522 aa21.79■■□□□ 1.08
SKA3-205ENST00000465471 RNF19BQ6ZMZ0 732 aa21.79■■□□□ 1.08
SKA3-205ENST00000465471 GPR149Q86SP6 731 aa21.79■■□□□ 1.08
SKA3-205ENST00000465471 THEM5Q8N1Q8 247 aa21.79■■□□□ 1.08
SKA3-205ENST00000465471 PKMYT1Q99640 499 aa21.79■■□□□ 1.08
SKA3-205ENST00000465471 ACBD6Q9BR61 282 aa21.79■■□□□ 1.08
SKA3-205ENST00000465471 APOL5Q9BWW9 433 aa21.79■■□□□ 1.08
SKA3-205ENST00000465471 A0A0C4DFX4 3053 aa21.78■■□□□ 1.08
SKA3-205ENST00000465471 PMM2O15305 246 aa21.78■■□□□ 1.08
SKA3-205ENST00000465471 SEC24AO95486 1093 aa21.78■■□□□ 1.08
SKA3-205ENST00000465471 FGFR1OPO95684 399 aaKnown RBP21.78■■□□□ 1.08
SKA3-205ENST00000465471 TNNC1P63316 161 aa21.78■■□□□ 1.08
SKA3-205ENST00000465471 ZNF667Q5HYK9 610 aa21.78■■□□□ 1.08
SKA3-205ENST00000465471 LIN9Q5TKA1 542 aa21.78■■□□□ 1.08
SKA3-205ENST00000465471 TCERG1LQ5VWI1 586 aa21.78■■□□□ 1.08
SKA3-205ENST00000465471 TMC5Q6UXY8 1006 aa21.78■■□□□ 1.08
SKA3-205ENST00000465471 IRF2BP1Q8IU81 584 aa21.78■■□□□ 1.08
SKA3-205ENST00000465471 SLC7A14Q8TBB6 771 aa21.78■■□□□ 1.08
SKA3-205ENST00000465471 MMRN2Q9H8L6 949 aa21.78■■□□□ 1.08
SKA3-205ENST00000465471 DDX43Q9NXZ2 648 aaKnown RBP21.78■■□□□ 1.08
SKA3-205ENST00000465471 CDH22Q9UJ99 828 aa21.78■■□□□ 1.08
SKA3-205ENST00000465471 POLIQ9UNA4 740 aa21.78■■□□□ 1.08
SKA3-205ENST00000465471 FAM50BQ9Y247 325 aa21.78■■□□□ 1.08
SKA3-205ENST00000465471 TCF20Q9UGU0 1960 aaKnown RBP21.78■■□□□ 1.08
SKA3-205ENST00000465471 CCDC195A0A1B0GUA6 201 aa21.77■■□□□ 1.08
SKA3-205ENST00000465471 MTMR11A4FU01 709 aa21.77■■□□□ 1.08
SKA3-205ENST00000465471 HNRNPA1P09651 372 aaKnown RBP eCLIP21.77■■□□□ 1.08
SKA3-205ENST00000465471 MYL7Q01449 175 aa21.77■■□□□ 1.08
SKA3-205ENST00000465471 ADCY1Q08828 1119 aa21.77■■□□□ 1.08
SKA3-205ENST00000465471 CBX2Q14781 532 aaPredicted RBP21.77■■□□□ 1.08
SKA3-205ENST00000465471 CES5AQ6NT32 575 aa21.77■■□□□ 1.08
SKA3-205ENST00000465471 CAVIN1Q6NZI2 390 aaKnown RBP21.77■■□□□ 1.08
SKA3-205ENST00000465471 CCDC149Q6ZUS6 474 aa21.77■■□□□ 1.08
SKA3-205ENST00000465471 LRRTM3Q86VH5 581 aa21.77■■□□□ 1.08
SKA3-205ENST00000465471 FBXL13Q8NEE6 735 aa21.77■■□□□ 1.08
SKA3-205ENST00000465471 SEMA4DQ92854 862 aa21.77■■□□□ 1.08
SKA3-205ENST00000465471 ELMO3Q96BJ8 720 aa21.77■■□□□ 1.08
SKA3-205ENST00000465471 MMS19Q96T76 1030 aa21.77■■□□□ 1.08
SKA3-205ENST00000465471 MRPL45Q9BRJ2 306 aaKnown RBP21.77■■□□□ 1.08
SKA3-205ENST00000465471 PRKD2Q9BZL6 878 aa21.77■■□□□ 1.08
SKA3-205ENST00000465471 APOBEC3GQ9HC16 384 aaKnown RBP21.77■■□□□ 1.08
SKA3-205ENST00000465471 HSFX1Q9UBD0 423 aa21.77■■□□□ 1.08
SKA3-205ENST00000465471 NXF1Q9UBU9 619 aaKnown RBP21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms