RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 ARSEP51690 589 aa19.36■□□□□ 0.69
SYNE4-204ENST00000465425 MYL6P60660 151 aa19.36■□□□□ 0.69
SYNE4-204ENST00000465425 ADCY1Q08828 1119 aa19.36■□□□□ 0.69
SYNE4-204ENST00000465425 TARBP2Q15633 366 aaKnown RBP19.36■□□□□ 0.69
SYNE4-204ENST00000465425 FAM133BQ5BKY9 247 aaKnown RBP19.36■□□□□ 0.69
SYNE4-204ENST00000465425 RIBC1Q8N443 379 aaPredicted RBP19.36■□□□□ 0.69
SYNE4-204ENST00000465425 FHDC1Q9C0D6 1143 aaPredicted RBP19.36■□□□□ 0.69
SYNE4-204ENST00000465425 SAYSD1Q9NPB0 183 aa19.36■□□□□ 0.69
SYNE4-204ENST00000465425 CISHQ9NSE2 258 aa19.36■□□□□ 0.69
SYNE4-204ENST00000465425 EXOC1LA0A1B0GW35 172 aa19.36■□□□□ 0.69
SYNE4-204ENST00000465425 RASA4BC9J798 803 aa19.36■□□□□ 0.69
SYNE4-204ENST00000465425 DNALI1O14645 258 aaPredicted RBP19.36■□□□□ 0.69
SYNE4-204ENST00000465425 RASA4O43374 803 aa19.36■□□□□ 0.69
SYNE4-204ENST00000465425 GH1P01241 217 aa19.36■□□□□ 0.69
SYNE4-204ENST00000465425 CETPP11597 493 aa19.36■□□□□ 0.69
SYNE4-204ENST00000465425 TAP1Q03518 808 aa19.36■□□□□ 0.69
SYNE4-204ENST00000465425 GRM1Q13255 1194 aa19.36■□□□□ 0.69
SYNE4-204ENST00000465425 PIGHQ14442 188 aaPredicted RBP19.36■□□□□ 0.69
SYNE4-204ENST00000465425 NEDD9Q14511 834 aa19.36■□□□□ 0.69
SYNE4-204ENST00000465425 DUOXA2Q1HG44 320 aa19.36■□□□□ 0.69
SYNE4-204ENST00000465425 SGSM1Q2NKQ1 1148 aa19.36■□□□□ 0.69
SYNE4-204ENST00000465425 SCARA3Q6AZY7 606 aa19.36■□□□□ 0.69
SYNE4-204ENST00000465425 DRICH1Q6PGQ1 229 aaPredicted RBP19.36■□□□□ 0.69
SYNE4-204ENST00000465425 TGS1Q96RS0 853 aaKnown RBP19.36■□□□□ 0.69
SYNE4-204ENST00000465425 PCYT2Q99447 389 aa19.36■□□□□ 0.69
SYNE4-204ENST00000465425 ZNF518BQ9C0D4 1074 aa19.36■□□□□ 0.69
SYNE4-204ENST00000465425 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.36■□□□□ 0.69
SYNE4-204ENST00000465425 AFG3L2Q9Y4W6 797 aa19.36■□□□□ 0.69
SYNE4-204ENST00000465425 ACTL7BQ9Y614 415 aa19.36■□□□□ 0.69
SYNE4-204ENST00000465425 TTLL13PA6NNM8 815 aa19.35■□□□□ 0.69
SYNE4-204ENST00000465425 MAFO75444 373 aaPredicted RBP19.35■□□□□ 0.69
SYNE4-204ENST00000465425 ABHD2P08910 425 aa19.35■□□□□ 0.69
SYNE4-204ENST00000465425 COPS2P61201 443 aa19.35■□□□□ 0.69
SYNE4-204ENST00000465425 PLCB3Q01970 1234 aa19.35■□□□□ 0.69
SYNE4-204ENST00000465425 GPS1Q13098 491 aa19.35■□□□□ 0.69
SYNE4-204ENST00000465425 TMED2Q15363 201 aa19.35■□□□□ 0.69
SYNE4-204ENST00000465425 TFDP3Q5H9I0 405 aa19.35■□□□□ 0.69
SYNE4-204ENST00000465425 GPAT2Q6NUI2 795 aa19.35■□□□□ 0.69
SYNE4-204ENST00000465425 PPP1R21Q6ZMI0 780 aa19.35■□□□□ 0.69
SYNE4-204ENST00000465425 SPOCD1Q6ZMY3 1216 aa19.35■□□□□ 0.69
SYNE4-204ENST00000465425 ERICH1Q86X53 443 aa19.35■□□□□ 0.69
SYNE4-204ENST00000465425 UBR7Q8N806 425 aa19.35■□□□□ 0.69
SYNE4-204ENST00000465425 TTC25Q96NG3 672 aa19.35■□□□□ 0.69
SYNE4-204ENST00000465425 ABCF3Q9NUQ8 709 aa19.35■□□□□ 0.69
SYNE4-204ENST00000465425 LRRD1A4D1F6 860 aa19.35■□□□□ 0.69
SYNE4-204ENST00000465425 OAS1P00973 400 aaKnown RBP19.35■□□□□ 0.69
SYNE4-204ENST00000465425 SRGAP2CP0DJJ0 459 aa19.35■□□□□ 0.69
SYNE4-204ENST00000465425 TCF7P36402 384 aaPredicted RBP19.35■□□□□ 0.69
SYNE4-204ENST00000465425 ZNF252P-AS1Q0IIN9 211 aa19.35■□□□□ 0.69
SYNE4-204ENST00000465425 MKRN3Q13064 507 aaKnown RBP19.35■□□□□ 0.69
SYNE4-204ENST00000465425 PRKG1Q13976 671 aa19.35■□□□□ 0.69
SYNE4-204ENST00000465425 ZKSCAN8Q15776 578 aaPredicted RBP19.35■□□□□ 0.69
SYNE4-204ENST00000465425 ALLCQ8N6M5 410 aa19.35■□□□□ 0.69
SYNE4-204ENST00000465425 GLIS1Q8NBF1 620 aa19.35■□□□□ 0.69
SYNE4-204ENST00000465425 HAUS1Q96CS2 278 aa19.35■□□□□ 0.69
SYNE4-204ENST00000465425 CD248Q9HCU0 757 aa19.35■□□□□ 0.69
SYNE4-204ENST00000465425 DDX56Q9NY93 547 aaKnown RBP19.35■□□□□ 0.69
SYNE4-204ENST00000465425 TPX2Q9ULW0 747 aaKnown RBP19.35■□□□□ 0.69
SYNE4-204ENST00000465425 OGTO15294 1046 aa19.34■□□□□ 0.69
SYNE4-204ENST00000465425 MSCO60682 206 aa19.34■□□□□ 0.69
SYNE4-204ENST00000465425 ZSCAN5DPP0CG00 497 aa19.34■□□□□ 0.69
SYNE4-204ENST00000465425 TFAMQ00059 246 aaKnown RBP19.34■□□□□ 0.69
SYNE4-204ENST00000465425 MPP2Q14168 576 aa19.34■□□□□ 0.69
SYNE4-204ENST00000465425 MAPK6Q16659 721 aa19.34■□□□□ 0.69
SYNE4-204ENST00000465425 SCARA5Q6ZMJ2 495 aa19.34■□□□□ 0.69
SYNE4-204ENST00000465425 ZBTB8OSQ8IWT0 167 aa19.34■□□□□ 0.69
SYNE4-204ENST00000465425 CCDC63Q8NA47 563 aa19.34■□□□□ 0.69
SYNE4-204ENST00000465425 PLCD4Q9BRC7 762 aa19.34■□□□□ 0.69
SYNE4-204ENST00000465425 SIP14410 1827 aa19.34■□□□□ 0.69
SYNE4-204ENST00000465425 EIF4BP23588 611 aaKnown RBP19.34■□□□□ 0.69
SYNE4-204ENST00000465425 BAG6P46379 1132 aa19.34■□□□□ 0.69
SYNE4-204ENST00000465425 SURF1Q15526 300 aa19.34■□□□□ 0.69
SYNE4-204ENST00000465425 ZNF699Q32M78 642 aa19.34■□□□□ 0.69
SYNE4-204ENST00000465425 SPATA21Q7Z572 469 aa19.34■□□□□ 0.69
SYNE4-204ENST00000465425 GBP7Q8N8V2 638 aaPredicted RBP19.34■□□□□ 0.69
SYNE4-204ENST00000465425 SEPT1Q8WYJ6 367 aa19.34■□□□□ 0.69
SYNE4-204ENST00000465425 MAGEB18Q96M61 343 aa19.34■□□□□ 0.69
SYNE4-204ENST00000465425 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.34■□□□□ 0.69
SYNE4-204ENST00000465425 hCG_1818297A0A087WSY0 165 aa19.33■□□□□ 0.69
SYNE4-204ENST00000465425 FAM189A1O60320 539 aa19.33■□□□□ 0.69
SYNE4-204ENST00000465425 PRKCBP05771 671 aa19.33■□□□□ 0.69
SYNE4-204ENST00000465425 WEE2P0C1S8 567 aa19.33■□□□□ 0.69
SYNE4-204ENST00000465425 PECAM1P16284 738 aaPredicted RBP19.33■□□□□ 0.69
SYNE4-204ENST00000465425 NR1H3Q13133 447 aa19.33■□□□□ 0.69
SYNE4-204ENST00000465425 MORF4L2Q15014 288 aa19.33■□□□□ 0.69
SYNE4-204ENST00000465425 IER5Q5VY09 327 aa19.33■□□□□ 0.69
SYNE4-204ENST00000465425 RNF149Q8NC42 400 aa19.33■□□□□ 0.69
SYNE4-204ENST00000465425 ACSF2Q96CM8 615 aaPredicted RBP19.33■□□□□ 0.69
SYNE4-204ENST00000465425 FAM167AQ96KS9 214 aa19.33■□□□□ 0.69
SYNE4-204ENST00000465425 ACO2Q99798 780 aaKnown RBP19.33■□□□□ 0.69
SYNE4-204ENST00000465425 AGTPBP1Q9UPW5 1226 aa19.33■□□□□ 0.69
SYNE4-204ENST00000465425 DRG1Q9Y295 367 aaKnown RBP19.33■□□□□ 0.69
SYNE4-204ENST00000465425 UTRNP46939 3433 aa19.33■□□□□ 0.68
SYNE4-204ENST00000465425 SGK1O00141 431 aa19.33■□□□□ 0.68
SYNE4-204ENST00000465425 FZD9O00144 591 aa19.33■□□□□ 0.68
SYNE4-204ENST00000465425 NDC80O14777 642 aa19.33■□□□□ 0.68
SYNE4-204ENST00000465425 IFNB1P01574 187 aa19.33■□□□□ 0.68
SYNE4-204ENST00000465425 ETS1P14921 441 aa19.33■□□□□ 0.68
SYNE4-204ENST00000465425 MARK3P27448 753 aa19.33■□□□□ 0.68
SYNE4-204ENST00000465425 VCPP55072 806 aaKnown RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms