RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 SOWAHAQ2M3V2 549 aa18.17■□□□□ 0.5
USP39-211ENST00000465282 ZSCAN23Q3MJ62 389 aa18.17■□□□□ 0.5
USP39-211ENST00000465282 ANO6Q4KMQ2 910 aa18.17■□□□□ 0.5
USP39-211ENST00000465282 SCARA3Q6AZY7 606 aa18.17■□□□□ 0.5
USP39-211ENST00000465282 C11orf57Q6ZUT1 292 aaPredicted RBP18.17■□□□□ 0.5
USP39-211ENST00000465282 TAS1R2Q8TE23 839 aa18.17■□□□□ 0.5
USP39-211ENST00000465282 UBE2ZQ9H832 354 aaPredicted RBP18.17■□□□□ 0.5
USP39-211ENST00000465282 L1RE1Q9UN81 338 aa18.17■□□□□ 0.5
USP39-211ENST00000465282 GABRDO14764 452 aa18.16■□□□□ 0.5
USP39-211ENST00000465282 ABLIM3O94929 683 aa18.16■□□□□ 0.5
USP39-211ENST00000465282 RPL17P18621 184 aaKnown RBP18.16■□□□□ 0.5
USP39-211ENST00000465282 WARSP23381 471 aaKnown RBP18.16■□□□□ 0.5
USP39-211ENST00000465282 PCSK1P29120 753 aa18.16■□□□□ 0.5
USP39-211ENST00000465282 MTIF2P46199 727 aaKnown RBP18.16■□□□□ 0.5
USP39-211ENST00000465282 UVSSAQ2YD98 709 aa18.16■□□□□ 0.5
USP39-211ENST00000465282 CBWD6Q4V339 395 aa18.16■□□□□ 0.5
USP39-211ENST00000465282 WDR44Q5JSH3 913 aa18.16■□□□□ 0.5
USP39-211ENST00000465282 CBWD3Q5JTY5 395 aa18.16■□□□□ 0.5
USP39-211ENST00000465282 CBWD5Q5RIA9 395 aa18.16■□□□□ 0.5
USP39-211ENST00000465282 RSPO2Q6UXX9 243 aaPredicted RBP18.16■□□□□ 0.5
USP39-211ENST00000465282 PALB2Q86YC2 1186 aa18.16■□□□□ 0.5
USP39-211ENST00000465282 ADGRF2Q8IZF7 708 aa18.16■□□□□ 0.5
USP39-211ENST00000465282 ACBD6Q9BR61 282 aa18.16■□□□□ 0.5
USP39-211ENST00000465282 NXF1Q9UBU9 619 aaKnown RBP18.16■□□□□ 0.5
USP39-211ENST00000465282 SMTNL1A8MU46 457 aa18.15■□□□□ 0.5
USP39-211ENST00000465282 TGM5O43548 720 aa18.15■□□□□ 0.5
USP39-211ENST00000465282 GLP2RO95838 553 aa18.15■□□□□ 0.5
USP39-211ENST00000465282 ATF2P15336 505 aa18.15■□□□□ 0.5
USP39-211ENST00000465282 LTBRP36941 435 aa18.15■□□□□ 0.5
USP39-211ENST00000465282 NOP14P78316 857 aaKnown RBP18.15■□□□□ 0.5
USP39-211ENST00000465282 ROR1Q01973 937 aa18.15■□□□□ 0.5
USP39-211ENST00000465282 GPR17Q13304 367 aa18.15■□□□□ 0.5
USP39-211ENST00000465282 MAN2A1Q16706 1144 aa18.15■□□□□ 0.5
USP39-211ENST00000465282 AAK1Q2M2I8 961 aa18.15■□□□□ 0.5
USP39-211ENST00000465282 CREBRFQ8IUR6 639 aa18.15■□□□□ 0.5
USP39-211ENST00000465282 TTC39CQ8N584 583 aa18.15■□□□□ 0.5
USP39-211ENST00000465282 CYP3A43Q9HB55 503 aa18.15■□□□□ 0.5
USP39-211ENST00000465282 SAMSN1Q9NSI8 373 aaKnown RBP18.15■□□□□ 0.5
USP39-211ENST00000465282 HSFX1Q9UBD0 423 aa18.15■□□□□ 0.5
USP39-211ENST00000465282 AFF4Q9UHB7 1163 aaKnown RBP18.15■□□□□ 0.5
USP39-211ENST00000465282 XIRP2A4UGR9 3374 aa18.15■□□□□ 0.5
USP39-211ENST00000465282 GTPBP10A4D1E9 387 aaKnown RBP18.14■□□□□ 0.49
USP39-211ENST00000465282 KCNJ18B7U540 433 aa18.14■□□□□ 0.49
USP39-211ENST00000465282 LINC01565O15544 149 aa18.14■□□□□ 0.49
USP39-211ENST00000465282 ADAM12O43184 909 aa18.14■□□□□ 0.49
USP39-211ENST00000465282 CLSTN1O94985 981 aa18.14■□□□□ 0.49
USP39-211ENST00000465282 PAPLNO95428 1278 aa18.14■□□□□ 0.49
USP39-211ENST00000465282 CPB1P15086 417 aa18.14■□□□□ 0.49
USP39-211ENST00000465282 EPCAMP16422 314 aa18.14■□□□□ 0.49
USP39-211ENST00000465282 ZNF165P49910 485 aa18.14■□□□□ 0.49
USP39-211ENST00000465282 TSPY1Q01534 308 aa18.14■□□□□ 0.49
USP39-211ENST00000465282 KCNJ12Q14500 433 aa18.14■□□□□ 0.49
USP39-211ENST00000465282 PUS10Q3MIT2 529 aaKnown RBP18.14■□□□□ 0.49
USP39-211ENST00000465282 TCP11X2Q5H9J9 407 aa18.14■□□□□ 0.49
USP39-211ENST00000465282 CDKAL1Q5VV42 579 aa18.14■□□□□ 0.49
USP39-211ENST00000465282 ANKRD54Q6NXT1 300 aa18.14■□□□□ 0.49
USP39-211ENST00000465282 LLGL2Q6P1M3 1020 aa18.14■□□□□ 0.49
USP39-211ENST00000465282 CYP26C1Q6V0L0 522 aa18.14■□□□□ 0.49
USP39-211ENST00000465282 CCDC149Q6ZUS6 474 aa18.14■□□□□ 0.49
USP39-211ENST00000465282 GLYCTKQ8IVS8 523 aa18.14■□□□□ 0.49
USP39-211ENST00000465282 DCP1BQ8IZD4 617 aaKnown RBP18.14■□□□□ 0.49
USP39-211ENST00000465282 KREMEN2Q8NCW0 462 aa18.14■□□□□ 0.49
USP39-211ENST00000465282 ANKRD20A12PQ8NF67 263 aa18.14■□□□□ 0.49
USP39-211ENST00000465282 VN1R2Q8NFZ6 395 aa18.14■□□□□ 0.49
USP39-211ENST00000465282 C2orf15Q8WU43 125 aaKnown RBP18.14■□□□□ 0.49
USP39-211ENST00000465282 KBTBD7Q8WVZ9 684 aa18.14■□□□□ 0.49
USP39-211ENST00000465282 MSLNLQ96KJ4 702 aa18.14■□□□□ 0.49
USP39-211ENST00000465282 RTP3Q9BQQ7 232 aa18.14■□□□□ 0.49
USP39-211ENST00000465282 TUBGCP2Q9BSJ2 902 aa18.14■□□□□ 0.49
USP39-211ENST00000465282 BCO2Q9BYV7 579 aa18.14■□□□□ 0.49
USP39-211ENST00000465282 RHOBTB2Q9BYZ6 727 aa18.14■□□□□ 0.49
USP39-211ENST00000465282 DNAI2Q9GZS0 605 aa18.14■□□□□ 0.49
USP39-211ENST00000465282 NIF3L1Q9GZT8 377 aa18.14■□□□□ 0.49
USP39-211ENST00000465282 ZCWPW1Q9H0M4 648 aa18.14■□□□□ 0.49
USP39-211ENST00000465282 SNX25Q9H3E2 840 aa18.14■□□□□ 0.49
USP39-211ENST00000465282 DDX43Q9NXZ2 648 aaKnown RBP18.14■□□□□ 0.49
USP39-211ENST00000465282 FBXW11Q9UKB1 542 aa18.14■□□□□ 0.49
USP39-211ENST00000465282 WDR27A2RRH5 827 aa18.13■□□□□ 0.49
USP39-211ENST00000465282 TBX10O75333 385 aa18.13■□□□□ 0.49
USP39-211ENST00000465282 TPM2P07951 284 aa18.13■□□□□ 0.49
USP39-211ENST00000465282 ELF1P32519 619 aa18.13■□□□□ 0.49
USP39-211ENST00000465282 GNL1P36915 607 aaPredicted RBP18.13■□□□□ 0.49
USP39-211ENST00000465282 MAPRE1Q15691 268 aaKnown RBP18.13■□□□□ 0.49
USP39-211ENST00000465282 NFE2Q16621 373 aaPredicted RBP18.13■□□□□ 0.49
USP39-211ENST00000465282 LIN9Q5TKA1 542 aa18.13■□□□□ 0.49
USP39-211ENST00000465282 EP400NLQ6ZTU2 488 aa18.13■□□□□ 0.49
USP39-211ENST00000465282 CMASQ8NFW8 434 aaPredicted RBP18.13■□□□□ 0.49
USP39-211ENST00000465282 SEMA4DQ92854 862 aa18.13■□□□□ 0.49
USP39-211ENST00000465282 SFXN1Q9H9B4 322 aa18.13■□□□□ 0.49
USP39-211ENST00000465282 MAN1C1Q9NR34 630 aa18.13■□□□□ 0.49
USP39-211ENST00000465282 FANCLQ9NW38 375 aa18.13■□□□□ 0.49
USP39-211ENST00000465282 ZDHHC7Q9NXF8 308 aa18.13■□□□□ 0.49
USP39-211ENST00000465282 CLEC1BQ9P126 229 aa18.13■□□□□ 0.49
USP39-211ENST00000465282 THEGQ9P2T0 379 aa18.13■□□□□ 0.49
USP39-211ENST00000465282 CDH9Q9ULB4 789 aa18.13■□□□□ 0.49
USP39-211ENST00000465282 HNRNPA1P09651 372 aaKnown RBP eCLIP18.12■□□□□ 0.49
USP39-211ENST00000465282 TRIM21P19474 475 aaKnown RBP18.12■□□□□ 0.49
USP39-211ENST00000465282 KCNA5P22460 613 aa18.12■□□□□ 0.49
USP39-211ENST00000465282 HOXA9P31269 272 aa18.12■□□□□ 0.49
USP39-211ENST00000465282 ARPP19P56211 112 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms