RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 PCDHA11Q9Y5I1 949 aa18.1■□□□□ 0.49
EXOSC3-203ENST00000465229 FHOD1Q9Y613 1164 aa18.1■□□□□ 0.49
EXOSC3-203ENST00000465229 CHD9Q3L8U1 2897 aa18.1■□□□□ 0.49
EXOSC3-203ENST00000465229 LINC01553A4QN01 128 aa18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 I3L4J1 428 aa18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 IPO7O95373 1038 aaKnown RBP18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 PAX3P23760 479 aa18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 POLR2FP61218 127 aaKnown RBP18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 GCNT1Q02742 428 aa18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 CUL2Q13617 745 aa18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 IQCEQ6IPM2 695 aa18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 PDXDC1Q6P996 788 aa18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 ANKRD7Q92527 254 aa18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 FAXDC2Q96IV6 333 aa18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 KREMEN1Q96MU8 473 aa18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 MMS19Q96T76 1030 aa18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 ARID3AQ99856 593 aa18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 BCO2Q9BYV7 579 aa18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 LZTFL1Q9NQ48 299 aa18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 FBXL5Q9UKA1 691 aa18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 DNAJC12Q9UKB3 198 aa18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 ADAM28Q9UKQ2 775 aa18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 CYB561D2O14569 222 aa18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 ARHGEF15O94989 841 aa18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 LCA5LO95447 670 aa18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 WEE2P0C1S8 567 aa18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 PBX2P40425 430 aa18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 CDH8P55286 799 aa18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 TNNC1P63316 161 aa18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 SOWAHAQ2M3V2 549 aa18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 DSTYKQ6XUX3 929 aa18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 LIMS2Q7Z4I7 341 aa18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 SLC39A11Q8N1S5 342 aa18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 IGSF21Q96ID5 467 aa18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 SUSD3Q96L08 255 aa18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 GPR62Q9BZJ7 368 aa18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 SDCBP2Q9H190 292 aa18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 SMYD3Q9H7B4 428 aa18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 AAASQ9NRG9 546 aa18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 YBX2Q9Y2T7 364 aaKnown RBP18.09■□□□□ 0.49
EXOSC3-203ENST00000465229 CHD7Q9P2D1 2997 aa18.08■□□□□ 0.49
EXOSC3-203ENST00000465229 M0QZQ0 153 aa18.08■□□□□ 0.48
EXOSC3-203ENST00000465229 CA3P07451 260 aa18.08■□□□□ 0.48
EXOSC3-203ENST00000465229 P4HA1P13674 534 aa18.08■□□□□ 0.48
EXOSC3-203ENST00000465229 TBXAS1P24557 533 aaPredicted RBP18.08■□□□□ 0.48
EXOSC3-203ENST00000465229 SCARA5Q6ZMJ2 495 aa18.08■□□□□ 0.48
EXOSC3-203ENST00000465229 CACNA2D4Q7Z3S7 1137 aa18.08■□□□□ 0.48
EXOSC3-203ENST00000465229 CCDC42Q96M95 316 aa18.08■□□□□ 0.48
EXOSC3-203ENST00000465229 PBX4Q9BYU1 374 aa18.08■□□□□ 0.48
EXOSC3-203ENST00000465229 NLRC4Q9NPP4 1024 aa18.08■□□□□ 0.48
EXOSC3-203ENST00000465229 SPG21Q9NZD8 308 aa18.08■□□□□ 0.48
EXOSC3-203ENST00000465229 SSU72P8A0A1W2PR75 194 aa18.07■□□□□ 0.48
EXOSC3-203ENST00000465229 CARNS1A5YM72 827 aa18.07■□□□□ 0.48
EXOSC3-203ENST00000465229 TRAPPC3O43617 180 aa18.07■□□□□ 0.48
EXOSC3-203ENST00000465229 HUS1O60921 280 aa18.07■□□□□ 0.48
EXOSC3-203ENST00000465229 URI1O94763 535 aaPredicted RBP18.07■□□□□ 0.48
EXOSC3-203ENST00000465229 EFEMP2O95967 443 aa18.07■□□□□ 0.48
EXOSC3-203ENST00000465229 RFX1P22670 979 aa18.07■□□□□ 0.48
EXOSC3-203ENST00000465229 BMPR1AP36894 532 aa18.07■□□□□ 0.48
EXOSC3-203ENST00000465229 MFAP3P55082 362 aa18.07■□□□□ 0.48
EXOSC3-203ENST00000465229 MAPK8IP2Q13387 824 aaPredicted RBP18.07■□□□□ 0.48
EXOSC3-203ENST00000465229 DPH6Q7L8W6 267 aa18.07■□□□□ 0.48
EXOSC3-203ENST00000465229 TOP6BLQ8N6T0 577 aa18.07■□□□□ 0.48
EXOSC3-203ENST00000465229 FAM81BQ96LP2 452 aa18.07■□□□□ 0.48
EXOSC3-203ENST00000465229 STK33Q9BYT3 514 aa18.07■□□□□ 0.48
EXOSC3-203ENST00000465229 CYP3A43Q9HB55 503 aa18.07■□□□□ 0.48
EXOSC3-203ENST00000465229 MYO6Q9UM54 1294 aa18.07■□□□□ 0.48
EXOSC3-203ENST00000465229 L1RE1Q9UN81 338 aa18.07■□□□□ 0.48
EXOSC3-203ENST00000465229 PCDHB12Q9Y5F1 795 aa18.07■□□□□ 0.48
EXOSC3-203ENST00000465229 TRIOBPQ9H2D6 2365 aa18.07■□□□□ 0.48
EXOSC3-203ENST00000465229 LRRC53A6NM62 1247 aa18.06■□□□□ 0.48
EXOSC3-203ENST00000465229 ACO1P21399 889 aaKnown RBP18.06■□□□□ 0.48
EXOSC3-203ENST00000465229 RAP1GAPP47736 663 aa18.06■□□□□ 0.48
EXOSC3-203ENST00000465229 RAPGEF1Q13905 1077 aa18.06■□□□□ 0.48
EXOSC3-203ENST00000465229 ARHGAP44Q17R89 818 aa18.06■□□□□ 0.48
EXOSC3-203ENST00000465229 WSCD1Q658N2 575 aa18.06■□□□□ 0.48
EXOSC3-203ENST00000465229 FUT10Q6P4F1 479 aa18.06■□□□□ 0.48
EXOSC3-203ENST00000465229 ENOSF1Q7L5Y1 443 aa18.06■□□□□ 0.48
EXOSC3-203ENST00000465229 SPRED2Q7Z698 418 aa18.06■□□□□ 0.48
EXOSC3-203ENST00000465229 PDCL2Q8N4E4 241 aa18.06■□□□□ 0.48
EXOSC3-203ENST00000465229 APPL2Q8NEU8 664 aa18.06■□□□□ 0.48
EXOSC3-203ENST00000465229 MRPL45Q9BRJ2 306 aaKnown RBP18.06■□□□□ 0.48
EXOSC3-203ENST00000465229 VN1R3Q9BXE9 311 aa18.06■□□□□ 0.48
EXOSC3-203ENST00000465229 GPR88Q9GZN0 384 aa18.06■□□□□ 0.48
EXOSC3-203ENST00000465229 ARHGAP20Q9P2F6 1191 aa18.06■□□□□ 0.48
EXOSC3-203ENST00000465229 DAAM1Q9Y4D1 1078 aa18.06■□□□□ 0.48
EXOSC3-203ENST00000465229 TIMM13Q9Y5L4 95 aaPredicted RBP18.06■□□□□ 0.48
EXOSC3-203ENST00000465229 KRT86O43790 486 aa18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 TACC1O75410 805 aa18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 PPM1AP35813 382 aa18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 DRAP1Q14919 205 aaPredicted RBP18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 SPA17Q15506 151 aa18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 ZNF569Q5MCW4 686 aa18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 TAS1R1Q7RTX1 841 aa18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 UBR7Q8N806 425 aa18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 KBTBD7Q8WVZ9 684 aa18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 TSC1Q92574 1164 aa18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 JAKMIP2Q96AA8 810 aa18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 TMEM169Q96HH4 297 aa18.05■□□□□ 0.48
EXOSC3-203ENST00000465229 C17orf80Q9BSJ5 609 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms