RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 TMEM8AQ9HCN3 771 aa15.58■□□□□ 0.08
SQSTM1-205ENST00000464493 C5orf42Q9H799 3197 aa15.58■□□□□ 0.08
SQSTM1-205ENST00000464493 TSC2P49815 1807 aa15.57■□□□□ 0.08
SQSTM1-205ENST00000464493 CCDC195A0A1B0GUA6 201 aa15.57■□□□□ 0.08
SQSTM1-205ENST00000464493 RFPL2O75678 378 aa15.57■□□□□ 0.08
SQSTM1-205ENST00000464493 HLA-DRAP01903 254 aa15.57■□□□□ 0.08
SQSTM1-205ENST00000464493 CPB1P15086 417 aa15.57■□□□□ 0.08
SQSTM1-205ENST00000464493 ATF2P15336 505 aa15.57■□□□□ 0.08
SQSTM1-205ENST00000464493 PTMSP20962 102 aa15.57■□□□□ 0.08
SQSTM1-205ENST00000464493 ELF1P32519 619 aa15.57■□□□□ 0.08
SQSTM1-205ENST00000464493 LHX1P48742 406 aa15.57■□□□□ 0.08
SQSTM1-205ENST00000464493 TNNC1P63316 161 aa15.57■□□□□ 0.08
SQSTM1-205ENST00000464493 GPR17Q13304 367 aa15.57■□□□□ 0.08
SQSTM1-205ENST00000464493 UVSSAQ2YD98 709 aa15.57■□□□□ 0.08
SQSTM1-205ENST00000464493 ZNF699Q32M78 642 aa15.57■□□□□ 0.08
SQSTM1-205ENST00000464493 DCAF17Q5H9S7 520 aaPredicted RBP15.57■□□□□ 0.08
SQSTM1-205ENST00000464493 CT47A1Q5JQC4 288 aaPredicted RBP15.57■□□□□ 0.08
SQSTM1-205ENST00000464493 LIN9Q5TKA1 542 aa15.57■□□□□ 0.08
SQSTM1-205ENST00000464493 KRT39Q6A163 491 aa15.57■□□□□ 0.08
SQSTM1-205ENST00000464493 SASS6Q6UVJ0 657 aa15.57■□□□□ 0.08
SQSTM1-205ENST00000464493 TMC5Q6UXY8 1006 aa15.57■□□□□ 0.08
SQSTM1-205ENST00000464493 LIMS2Q7Z4I7 341 aa15.57■□□□□ 0.08
SQSTM1-205ENST00000464493 ADGRF2Q8IZF7 708 aa15.57■□□□□ 0.08
SQSTM1-205ENST00000464493 CMASQ8NFW8 434 aaPredicted RBP15.57■□□□□ 0.08
SQSTM1-205ENST00000464493 OR10T2Q8NGX3 314 aa15.57■□□□□ 0.08
SQSTM1-205ENST00000464493 SPATA18Q8TC71 538 aa15.57■□□□□ 0.08
SQSTM1-205ENST00000464493 MED15Q96RN5 788 aa15.57■□□□□ 0.08
SQSTM1-205ENST00000464493 RTP3Q9BQQ7 232 aa15.57■□□□□ 0.08
SQSTM1-205ENST00000464493 DDX43Q9NXZ2 648 aaKnown RBP15.57■□□□□ 0.08
SQSTM1-205ENST00000464493 TMEM63CQ9P1W3 806 aa15.57■□□□□ 0.08
SQSTM1-205ENST00000464493 NXF1Q9UBU9 619 aaKnown RBP15.57■□□□□ 0.08
SQSTM1-205ENST00000464493 MAFFQ9ULX9 164 aa15.57■□□□□ 0.08
SQSTM1-205ENST00000464493 USP15Q9Y4E8 981 aaPredicted RBP15.57■□□□□ 0.08
SQSTM1-205ENST00000464493 GABRDO14764 452 aa15.56■□□□□ 0.08
SQSTM1-205ENST00000464493 ZMYND10O75800 440 aa15.56■□□□□ 0.08
SQSTM1-205ENST00000464493 CLSTN1O94985 981 aa15.56■□□□□ 0.08
SQSTM1-205ENST00000464493 C8AP07357 584 aa15.56■□□□□ 0.08
SQSTM1-205ENST00000464493 FAM163BP0C2L3 166 aa15.56■□□□□ 0.08
SQSTM1-205ENST00000464493 OR4Q2P0C623 313 aa15.56■□□□□ 0.08
SQSTM1-205ENST00000464493 IL9P15248 144 aa15.56■□□□□ 0.08
SQSTM1-205ENST00000464493 ERCC5P28715 1186 aaPredicted RBP15.56■□□□□ 0.08
SQSTM1-205ENST00000464493 PIK3CAP42336 1068 aa15.56■□□□□ 0.08
SQSTM1-205ENST00000464493 MYL7Q01449 175 aa15.56■□□□□ 0.08
SQSTM1-205ENST00000464493 ADCY1Q08828 1119 aa15.56■□□□□ 0.08
SQSTM1-205ENST00000464493 SMAD2Q15796 467 aaKnown RBP15.56■□□□□ 0.08
SQSTM1-205ENST00000464493 ZNF667Q5HYK9 610 aa15.56■□□□□ 0.08
SQSTM1-205ENST00000464493 ATAT1Q5SQI0 421 aa15.56■□□□□ 0.08
SQSTM1-205ENST00000464493 RNF19BQ6ZMZ0 732 aa15.56■□□□□ 0.08
SQSTM1-205ENST00000464493 CCDC149Q6ZUS6 474 aa15.56■□□□□ 0.08
SQSTM1-205ENST00000464493 RTL10Q7L3V2 364 aa15.56■□□□□ 0.08
SQSTM1-205ENST00000464493 GPR149Q86SP6 731 aa15.56■□□□□ 0.08
SQSTM1-205ENST00000464493 TAS1R2Q8TE23 839 aa15.56■□□□□ 0.08
SQSTM1-205ENST00000464493 SUSD6Q92537 303 aa15.56■□□□□ 0.08
SQSTM1-205ENST00000464493 TAF4BQ92750 862 aa15.56■□□□□ 0.08
SQSTM1-205ENST00000464493 SLC35C1Q96A29 364 aa15.56■□□□□ 0.08
SQSTM1-205ENST00000464493 TMEM209Q96SK2 561 aa15.56■□□□□ 0.08
SQSTM1-205ENST00000464493 ACBD6Q9BR61 282 aa15.56■□□□□ 0.08
SQSTM1-205ENST00000464493 ZCWPW1Q9H0M4 648 aa15.56■□□□□ 0.08
SQSTM1-205ENST00000464493 ZDHHC7Q9NXF8 308 aa15.56■□□□□ 0.08
SQSTM1-205ENST00000464493 AFF4Q9UHB7 1163 aaKnown RBP15.56■□□□□ 0.08
SQSTM1-205ENST00000464493 TCF20Q9UGU0 1960 aaKnown RBP15.56■□□□□ 0.08
SQSTM1-205ENST00000464493 PRRG1O14668 218 aa15.55■□□□□ 0.08
SQSTM1-205ENST00000464493 TACC1O75410 805 aa15.55■□□□□ 0.08
SQSTM1-205ENST00000464493 PAPLNO95428 1278 aa15.55■□□□□ 0.08
SQSTM1-205ENST00000464493 ASS1P00966 412 aaKnown RBP15.55■□□□□ 0.08
SQSTM1-205ENST00000464493 CCDC192P0DO97 292 aa15.55■□□□□ 0.08
SQSTM1-205ENST00000464493 P4HA1P13674 534 aa15.55■□□□□ 0.08
SQSTM1-205ENST00000464493 MXI1P50539 228 aa15.55■□□□□ 0.08
SQSTM1-205ENST00000464493 TPD52L1Q16890 204 aaPredicted RBP15.55■□□□□ 0.08
SQSTM1-205ENST00000464493 PPM1LQ5SGD2 360 aa15.55■□□□□ 0.08
SQSTM1-205ENST00000464493 CAVIN1Q6NZI2 390 aaKnown RBP15.55■□□□□ 0.08
SQSTM1-205ENST00000464493 CYP26C1Q6V0L0 522 aa15.55■□□□□ 0.08
SQSTM1-205ENST00000464493 OSTM1Q86WC4 334 aa15.55■□□□□ 0.08
SQSTM1-205ENST00000464493 TCEAL8Q8IYN2 117 aa15.55■□□□□ 0.08
SQSTM1-205ENST00000464493 CCDC150Q8NCX0 1101 aa15.55■□□□□ 0.08
SQSTM1-205ENST00000464493 FBXL13Q8NEE6 735 aa15.55■□□□□ 0.08
SQSTM1-205ENST00000464493 SLC7A14Q8TBB6 771 aa15.55■□□□□ 0.08
SQSTM1-205ENST00000464493 KBTBD7Q8WVZ9 684 aa15.55■□□□□ 0.08
SQSTM1-205ENST00000464493 ELMO3Q96BJ8 720 aa15.55■□□□□ 0.08
SQSTM1-205ENST00000464493 RIPOR3Q96MK2 946 aa15.55■□□□□ 0.08
SQSTM1-205ENST00000464493 PGLYRP2Q96PD5 576 aa15.55■□□□□ 0.08
SQSTM1-205ENST00000464493 PRKD2Q9BZL6 878 aa15.55■□□□□ 0.08
SQSTM1-205ENST00000464493 IMPG2Q9BZV3 1241 aa15.55■□□□□ 0.08
SQSTM1-205ENST00000464493 CYP4F11Q9HBI6 524 aa15.55■□□□□ 0.08
SQSTM1-205ENST00000464493 POLIQ9UNA4 740 aa15.55■□□□□ 0.08
SQSTM1-205ENST00000464493 SEC24AO95486 1093 aa15.54■□□□□ 0.08
SQSTM1-205ENST00000464493 HNRNPA1P09651 372 aaKnown RBP eCLIP15.54■□□□□ 0.08
SQSTM1-205ENST00000464493 WEE2P0C1S8 567 aa15.54■□□□□ 0.08
SQSTM1-205ENST00000464493 WARSP23381 471 aaKnown RBP15.54■□□□□ 0.08
SQSTM1-205ENST00000464493 PCSK1P29120 753 aa15.54■□□□□ 0.08
SQSTM1-205ENST00000464493 HOXA9P31269 272 aa15.54■□□□□ 0.08
SQSTM1-205ENST00000464493 GNL1P36915 607 aaPredicted RBP15.54■□□□□ 0.08
SQSTM1-205ENST00000464493 MTHFRP42898 656 aa15.54■□□□□ 0.08
SQSTM1-205ENST00000464493 MARSP56192 900 aaKnown RBP15.54■□□□□ 0.08
SQSTM1-205ENST00000464493 TSPY1Q01534 308 aa15.54■□□□□ 0.08
SQSTM1-205ENST00000464493 CBX2Q14781 532 aaPredicted RBP15.54■□□□□ 0.08
SQSTM1-205ENST00000464493 KLHL40Q2TBA0 621 aa15.54■□□□□ 0.08
SQSTM1-205ENST00000464493 CBWD6Q4V339 395 aa15.54■□□□□ 0.08
SQSTM1-205ENST00000464493 SLC39A12Q504Y0 691 aa15.54■□□□□ 0.08
SQSTM1-205ENST00000464493 CBWD3Q5JTY5 395 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms