RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 OR10T2Q8NGX3 314 aa18.31■□□□□ 0.52
VPS52-215ENST00000464425 RTP3Q9BQQ7 232 aa18.31■□□□□ 0.52
VPS52-215ENST00000464425 WDR6Q9NNW5 1121 aaKnown RBP18.31■□□□□ 0.52
VPS52-215ENST00000464425 AFF4Q9UHB7 1163 aaKnown RBP18.31■□□□□ 0.52
VPS52-215ENST00000464425 L1RE1Q9UN81 338 aa18.31■□□□□ 0.52
VPS52-215ENST00000464425 NR2E1Q9Y466 385 aa18.31■□□□□ 0.52
VPS52-215ENST00000464425 BDP1A6H8Y1 2624 aa18.31■□□□□ 0.52
VPS52-215ENST00000464425 C2CD4DB7Z1M9 353 aa18.3■□□□□ 0.52
VPS52-215ENST00000464425 PAPLNO95428 1278 aa18.3■□□□□ 0.52
VPS52-215ENST00000464425 CD44P16070 742 aaKnown RBP18.3■□□□□ 0.52
VPS52-215ENST00000464425 PMS1P54277 932 aaKnown RBP18.3■□□□□ 0.52
VPS52-215ENST00000464425 GPR17Q13304 367 aa18.3■□□□□ 0.52
VPS52-215ENST00000464425 BIRC3Q13489 604 aa18.3■□□□□ 0.52
VPS52-215ENST00000464425 TRPC3Q13507 836 aa18.3■□□□□ 0.52
VPS52-215ENST00000464425 EDRF1Q3B7T1 1238 aa18.3■□□□□ 0.52
VPS52-215ENST00000464425 CT47A1Q5JQC4 288 aaPredicted RBP18.3■□□□□ 0.52
VPS52-215ENST00000464425 SASS6Q6UVJ0 657 aa18.3■□□□□ 0.52
VPS52-215ENST00000464425 GRASPQ7Z6J2 395 aaPredicted RBP18.3■□□□□ 0.52
VPS52-215ENST00000464425 RNF135Q8IUD6 432 aa18.3■□□□□ 0.52
VPS52-215ENST00000464425 TCEAL8Q8IYN2 117 aa18.3■□□□□ 0.52
VPS52-215ENST00000464425 TSG101Q99816 390 aa18.3■□□□□ 0.52
VPS52-215ENST00000464425 RHOBTB2Q9BYZ6 727 aa18.3■□□□□ 0.52
VPS52-215ENST00000464425 GDAP2Q9NXN4 497 aa18.3■□□□□ 0.52
VPS52-215ENST00000464425 TRIM49BA6NDI0 452 aa18.29■□□□□ 0.52
VPS52-215ENST00000464425 XYLBO75191 536 aa18.29■□□□□ 0.52
VPS52-215ENST00000464425 VNN2O95498 520 aa18.29■□□□□ 0.52
VPS52-215ENST00000464425 CCNE1P24864 410 aa18.29■□□□□ 0.52
VPS52-215ENST00000464425 HOXA9P31269 272 aa18.29■□□□□ 0.52
VPS52-215ENST00000464425 PSMC2P35998 433 aaKnown RBP18.29■□□□□ 0.52
VPS52-215ENST00000464425 VAMP7P51809 220 aa18.29■□□□□ 0.52
VPS52-215ENST00000464425 MYL6P60660 151 aa18.29■□□□□ 0.52
VPS52-215ENST00000464425 CLDN10P78369 228 aa18.29■□□□□ 0.52
VPS52-215ENST00000464425 NTHL1P78549 312 aa18.29■□□□□ 0.52
VPS52-215ENST00000464425 LRRC63Q05C16 580 aa18.29■□□□□ 0.52
VPS52-215ENST00000464425 DUSP4Q13115 394 aa18.29■□□□□ 0.52
VPS52-215ENST00000464425 SLC39A12Q504Y0 691 aa18.29■□□□□ 0.52
VPS52-215ENST00000464425 TDRD10Q5VZ19 366 aaKnown RBP18.29■□□□□ 0.52
VPS52-215ENST00000464425 ANKRD40Q6AI12 368 aa18.29■□□□□ 0.52
VPS52-215ENST00000464425 RTL10Q7L3V2 364 aa18.29■□□□□ 0.52
VPS52-215ENST00000464425 FAM186BQ8IYM0 893 aa18.29■□□□□ 0.52
VPS52-215ENST00000464425 TOP6BLQ8N6T0 577 aa18.29■□□□□ 0.52
VPS52-215ENST00000464425 ATAD1Q8NBU5 361 aa18.29■□□□□ 0.52
VPS52-215ENST00000464425 TMC2Q8TDI7 906 aa18.29■□□□□ 0.52
VPS52-215ENST00000464425 ZCWPW1Q9H0M4 648 aa18.29■□□□□ 0.52
VPS52-215ENST00000464425 SLC27A5Q9Y2P5 690 aa18.29■□□□□ 0.52
VPS52-215ENST00000464425 CLUHO75153 1309 aa18.28■□□□□ 0.52
VPS52-215ENST00000464425 C2orf16Q68DN1 1984 aa18.28■□□□□ 0.52
VPS52-215ENST00000464425 CETN3O15182 167 aa18.28■□□□□ 0.52
VPS52-215ENST00000464425 MAPK13O15264 365 aa18.28■□□□□ 0.52
VPS52-215ENST00000464425 CLSTN1O94985 981 aa18.28■□□□□ 0.52
VPS52-215ENST00000464425 LRG1P02750 347 aa18.28■□□□□ 0.52
VPS52-215ENST00000464425 C4BPAP04003 597 aaKnown RBP18.28■□□□□ 0.52
VPS52-215ENST00000464425 KRT13P13646 458 aa18.28■□□□□ 0.52
VPS52-215ENST00000464425 AP3M2P53677 418 aa18.28■□□□□ 0.52
VPS52-215ENST00000464425 SOWAHAQ2M3V2 549 aa18.28■□□□□ 0.52
VPS52-215ENST00000464425 C1orf220Q5T0J3 134 aa18.28■□□□□ 0.52
VPS52-215ENST00000464425 KLHL10Q6JEL2 608 aa18.28■□□□□ 0.52
VPS52-215ENST00000464425 LRRTM3Q86VH5 581 aa18.28■□□□□ 0.52
VPS52-215ENST00000464425 OSTM1Q86WC4 334 aa18.28■□□□□ 0.52
VPS52-215ENST00000464425 ADGRF2Q8IZF7 708 aa18.28■□□□□ 0.52
VPS52-215ENST00000464425 TMEM86AQ8N2M4 240 aa18.28■□□□□ 0.52
VPS52-215ENST00000464425 TDRD5Q8NAT2 981 aaKnown RBP18.28■□□□□ 0.52
VPS52-215ENST00000464425 ELMO3Q96BJ8 720 aa18.28■□□□□ 0.52
VPS52-215ENST00000464425 MMS19Q96T76 1030 aa18.28■□□□□ 0.52
VPS52-215ENST00000464425 CRISPLD1Q9H336 500 aa18.28■□□□□ 0.52
VPS52-215ENST00000464425 EPHX3Q9H6B9 360 aa18.28■□□□□ 0.52
VPS52-215ENST00000464425 HCFC1R1Q9NWW0 138 aa18.28■□□□□ 0.52
VPS52-215ENST00000464425 DDX43Q9NXZ2 648 aaKnown RBP18.28■□□□□ 0.52
VPS52-215ENST00000464425 DACH1Q9UI36 760 aa18.28■□□□□ 0.52
VPS52-215ENST00000464425 MUTYHQ9UIF7 546 aa18.28■□□□□ 0.52
VPS52-215ENST00000464425 MAFFQ9ULX9 164 aa18.28■□□□□ 0.52
VPS52-215ENST00000464425 INSL5Q9Y5Q6 135 aa18.28■□□□□ 0.52
VPS52-215ENST00000464425 DOCK6Q96HP0 2047 aa18.27■□□□□ 0.52
VPS52-215ENST00000464425 BICDL2A1A5D9 508 aa18.27■□□□□ 0.52
VPS52-215ENST00000464425 HCRTO43612 131 aa18.27■□□□□ 0.52
VPS52-215ENST00000464425 TRIM49P0CI25 452 aa18.27■□□□□ 0.52
VPS52-215ENST00000464425 TRIM49CP0CI26 452 aa18.27■□□□□ 0.52
VPS52-215ENST00000464425 ACAT1P24752 427 aaKnown RBP18.27■□□□□ 0.52
VPS52-215ENST00000464425 GBP2P32456 591 aaPredicted RBP18.27■□□□□ 0.52
VPS52-215ENST00000464425 TWF1Q12792 350 aa18.27■□□□□ 0.52
VPS52-215ENST00000464425 NCOA4Q13772 614 aa18.27■□□□□ 0.52
VPS52-215ENST00000464425 DPCR1Q3MIW9 517 aa18.27■□□□□ 0.52
VPS52-215ENST00000464425 WDR72Q3MJ13 1102 aa18.27■□□□□ 0.52
VPS52-215ENST00000464425 INTS8Q75QN2 995 aaKnown RBP18.27■□□□□ 0.52
VPS52-215ENST00000464425 GET4Q7L5D6 327 aaPredicted RBP18.27■□□□□ 0.52
VPS52-215ENST00000464425 OTOP3Q7RTS5 596 aa18.27■□□□□ 0.52
VPS52-215ENST00000464425 NELFBQ8WX92 580 aa18.27■□□□□ 0.52
VPS52-215ENST00000464425 ACSF2Q96CM8 615 aaPredicted RBP18.27■□□□□ 0.52
VPS52-215ENST00000464425 MMRN2Q9H8L6 949 aa18.27■□□□□ 0.52
VPS52-215ENST00000464425 ANO10Q9NW15 660 aa18.27■□□□□ 0.52
VPS52-215ENST00000464425 DNMT3BQ9UBC3 853 aaKnown RBP18.27■□□□□ 0.52
VPS52-215ENST00000464425 NXF1Q9UBU9 619 aaKnown RBP18.27■□□□□ 0.52
VPS52-215ENST00000464425 LIMD1Q9UGP4 676 aa18.27■□□□□ 0.52
VPS52-215ENST00000464425 RWDD2AQ9UIY3 292 aa18.27■□□□□ 0.52
VPS52-215ENST00000464425 USTQ9Y2C2 406 aa18.27■□□□□ 0.52
VPS52-215ENST00000464425 MTMR11A4FU01 709 aa18.26■□□□□ 0.51
VPS52-215ENST00000464425 IKBKBO14920 756 aa18.26■□□□□ 0.51
VPS52-215ENST00000464425 N4BP1O75113 896 aaKnown RBP18.26■□□□□ 0.51
VPS52-215ENST00000464425 VNN1O95497 513 aa18.26■□□□□ 0.51
VPS52-215ENST00000464425 EPB41P11171 864 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms