RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 TUFMP49411 452 aaKnown RBP20.35■□□□□ 0.85
SF3A1-205ENST00000463818 E2F4Q16254 413 aa20.35■□□□□ 0.85
SF3A1-205ENST00000463818 VITQ6UXI7 678 aa20.35■□□□□ 0.85
SF3A1-205ENST00000463818 TPRG1Q6ZUI0 275 aa20.35■□□□□ 0.85
SF3A1-205ENST00000463818 LRRTM3Q86VH5 581 aa20.35■□□□□ 0.85
SF3A1-205ENST00000463818 NOC3LQ8WTT2 800 aaKnown RBP20.35■□□□□ 0.85
SF3A1-205ENST00000463818 CACTINQ8WUQ7 758 aaKnown RBP20.35■□□□□ 0.85
SF3A1-205ENST00000463818 NELL2Q99435 816 aa20.35■□□□□ 0.85
SF3A1-205ENST00000463818 BCO2Q9BYV7 579 aa20.35■□□□□ 0.85
SF3A1-205ENST00000463818 SLITRK6Q9H5Y7 841 aa20.35■□□□□ 0.85
SF3A1-205ENST00000463818 TRPV4Q9HBA0 871 aa20.35■□□□□ 0.85
SF3A1-205ENST00000463818 RBAKQ9NYW8 714 aaPredicted RBP20.35■□□□□ 0.85
SF3A1-205ENST00000463818 HSFX1Q9UBD0 423 aa20.35■□□□□ 0.85
SF3A1-205ENST00000463818 AGAP1Q9UPQ3 857 aa20.35■□□□□ 0.85
SF3A1-205ENST00000463818 CUTAO60888 179 aa20.34■□□□□ 0.85
SF3A1-205ENST00000463818 FOXD4L6Q3SYB3 417 aaPredicted RBP20.34■□□□□ 0.85
SF3A1-205ENST00000463818 SV2CQ496J9 727 aa20.34■□□□□ 0.85
SF3A1-205ENST00000463818 FOXD4L3Q6VB84 417 aaPredicted RBP20.34■□□□□ 0.85
SF3A1-205ENST00000463818 ZNF852Q6ZMS4 543 aa20.34■□□□□ 0.85
SF3A1-205ENST00000463818 DNASE1L2Q92874 299 aa20.34■□□□□ 0.85
SF3A1-205ENST00000463818 HPS3Q969F9 1004 aa20.34■□□□□ 0.85
SF3A1-205ENST00000463818 PSMG2Q969U7 264 aa20.34■□□□□ 0.85
SF3A1-205ENST00000463818 DHX58Q96C10 678 aa20.34■□□□□ 0.85
SF3A1-205ENST00000463818 TNMDQ9H2S6 317 aa20.34■□□□□ 0.85
SF3A1-205ENST00000463818 CUEDC2Q9H467 287 aa20.34■□□□□ 0.85
SF3A1-205ENST00000463818 ZNF334Q9HCZ1 680 aaPredicted RBP20.34■□□□□ 0.85
SF3A1-205ENST00000463818 KBTBD4Q9NVX7 518 aa20.34■□□□□ 0.85
SF3A1-205ENST00000463818 HEPACAM2A8MVW5 462 aa20.33■□□□□ 0.85
SF3A1-205ENST00000463818 YEATS4O95619 227 aa20.33■□□□□ 0.85
SF3A1-205ENST00000463818 SP9P0CG40 484 aa20.33■□□□□ 0.85
SF3A1-205ENST00000463818 TARSP26639 723 aaKnown RBP20.33■□□□□ 0.85
SF3A1-205ENST00000463818 POLR2BP30876 1174 aaKnown RBP20.33■□□□□ 0.85
SF3A1-205ENST00000463818 GDI1P31150 447 aa20.33■□□□□ 0.85
SF3A1-205ENST00000463818 PNPLA4P41247 253 aa20.33■□□□□ 0.85
SF3A1-205ENST00000463818 AMPD3Q01432 767 aa20.33■□□□□ 0.85
SF3A1-205ENST00000463818 SCARA3Q6AZY7 606 aa20.33■□□□□ 0.85
SF3A1-205ENST00000463818 SHC4Q6S5L8 630 aa20.33■□□□□ 0.85
SF3A1-205ENST00000463818 GAREM2Q75VX8 874 aa20.33■□□□□ 0.85
SF3A1-205ENST00000463818 ITIH5Q86UX2 942 aa20.33■□□□□ 0.85
SF3A1-205ENST00000463818 GPIHBP1Q8IV16 184 aa20.33■□□□□ 0.85
SF3A1-205ENST00000463818 MFSD6LQ8IWD5 586 aa20.33■□□□□ 0.85
SF3A1-205ENST00000463818 HSCBQ8IWL3 235 aa20.33■□□□□ 0.85
SF3A1-205ENST00000463818 CSGALNACT2Q8N6G5 542 aa20.33■□□□□ 0.85
SF3A1-205ENST00000463818 C1orf127Q8N9H9 656 aa20.33■□□□□ 0.85
SF3A1-205ENST00000463818 IQUBQ8NA54 791 aa20.33■□□□□ 0.85
SF3A1-205ENST00000463818 GLIS3Q8NEA6 775 aa20.33■□□□□ 0.85
SF3A1-205ENST00000463818 FAM200AQ8TCP9 573 aa20.33■□□□□ 0.85
SF3A1-205ENST00000463818 IRF7Q92985 503 aa20.33■□□□□ 0.85
SF3A1-205ENST00000463818 ZNF560Q96MR9 790 aa20.33■□□□□ 0.85
SF3A1-205ENST00000463818 SEPT5Q99719 369 aaPredicted RBP20.33■□□□□ 0.85
SF3A1-205ENST00000463818 TRIM9Q9C026 710 aa20.33■□□□□ 0.85
SF3A1-205ENST00000463818 ATXN3LQ9H3M9 355 aa20.33■□□□□ 0.85
SF3A1-205ENST00000463818 PDE11AQ9HCR9 933 aa20.33■□□□□ 0.85
SF3A1-205ENST00000463818 R4GN57 208 aa20.33■□□□□ 0.85
SF3A1-205ENST00000463818 SHISA7A6NL88 538 aa20.32■□□□□ 0.84
SF3A1-205ENST00000463818 ITGB3P05106 788 aa20.32■□□□□ 0.84
SF3A1-205ENST00000463818 HSP90AA1P07900 732 aaKnown RBP20.32■□□□□ 0.84
SF3A1-205ENST00000463818 ZSCAN22P10073 491 aaPredicted RBP20.32■□□□□ 0.84
SF3A1-205ENST00000463818 PDIA4P13667 645 aaKnown RBP20.32■□□□□ 0.84
SF3A1-205ENST00000463818 MGAT5BQ3V5L5 792 aa20.32■□□□□ 0.84
SF3A1-205ENST00000463818 STXBP4Q6ZWJ1 553 aa20.32■□□□□ 0.84
SF3A1-205ENST00000463818 DCP1BQ8IZD4 617 aaKnown RBP20.32■□□□□ 0.84
SF3A1-205ENST00000463818 MAML2Q8IZL2 1156 aaPredicted RBP20.32■□□□□ 0.84
SF3A1-205ENST00000463818 GPD1LQ8N335 351 aa20.32■□□□□ 0.84
SF3A1-205ENST00000463818 DEPDC1BQ8WUY9 529 aa20.32■□□□□ 0.84
SF3A1-205ENST00000463818 E2F7Q96AV8 911 aa20.32■□□□□ 0.84
SF3A1-205ENST00000463818 FAM84AQ96KN4 292 aa20.32■□□□□ 0.84
SF3A1-205ENST00000463818 LPIN3Q9BQK8 851 aa20.32■□□□□ 0.84
SF3A1-205ENST00000463818 SPATA6Q9NWH7 488 aaPredicted RBP20.32■□□□□ 0.84
SF3A1-205ENST00000463818 MRPS17Q9Y2R5 130 aaKnown RBP20.32■□□□□ 0.84
SF3A1-205ENST00000463818 MYH15Q9Y2K3 1946 aa20.31■□□□□ 0.84
SF3A1-205ENST00000463818 RIF1Q5UIP0 2472 aaKnown RBP20.31■□□□□ 0.84
SF3A1-205ENST00000463818 MAN2B1O00754 1011 aa20.31■□□□□ 0.84
SF3A1-205ENST00000463818 ZNF263O14978 683 aa20.31■□□□□ 0.84
SF3A1-205ENST00000463818 NCAM2O15394 837 aa20.31■□□□□ 0.84
SF3A1-205ENST00000463818 FGF19O95750 216 aa20.31■□□□□ 0.84
SF3A1-205ENST00000463818 GABRR2P28476 465 aa20.31■□□□□ 0.84
SF3A1-205ENST00000463818 ASIC1P78348 528 aa20.31■□□□□ 0.84
SF3A1-205ENST00000463818 SMARCB1Q12824 385 aa20.31■□□□□ 0.84
SF3A1-205ENST00000463818 FZD5Q13467 585 aa20.31■□□□□ 0.84
SF3A1-205ENST00000463818 STXBP5Q5T5C0 1151 aa20.31■□□□□ 0.84
SF3A1-205ENST00000463818 ARID3BQ8IVW6 561 aaPredicted RBP20.31■□□□□ 0.84
SF3A1-205ENST00000463818 PDCL2Q8N4E4 241 aa20.31■□□□□ 0.84
SF3A1-205ENST00000463818 CXorf38Q8TB03 319 aa20.31■□□□□ 0.84
SF3A1-205ENST00000463818 SPPL2BQ8TCT7 592 aa20.31■□□□□ 0.84
SF3A1-205ENST00000463818 KCNG4Q8TDN1 519 aa20.31■□□□□ 0.84
SF3A1-205ENST00000463818 GIPC2Q8TF65 315 aa20.31■□□□□ 0.84
SF3A1-205ENST00000463818 C2orf15Q8WU43 125 aaKnown RBP20.31■□□□□ 0.84
SF3A1-205ENST00000463818 CLDN23Q96B33 292 aa20.31■□□□□ 0.84
SF3A1-205ENST00000463818 RSPRY1Q96DX4 576 aa20.31■□□□□ 0.84
SF3A1-205ENST00000463818 TRPV5Q9NQA5 729 aa20.31■□□□□ 0.84
SF3A1-205ENST00000463818 USP34Q70CQ2 3546 aa20.31■□□□□ 0.84
SF3A1-205ENST00000463818 NCANO14594 1321 aa20.3■□□□□ 0.84
SF3A1-205ENST00000463818 KIAA0391O15091 583 aaKnown RBP20.3■□□□□ 0.84
SF3A1-205ENST00000463818 LAMTOR5O43504 91 aa20.3■□□□□ 0.84
SF3A1-205ENST00000463818 HUS1O60921 280 aa20.3■□□□□ 0.84
SF3A1-205ENST00000463818 F13A1P00488 732 aa20.3■□□□□ 0.84
SF3A1-205ENST00000463818 HAPLN1P10915 354 aaPredicted RBP20.3■□□□□ 0.84
SF3A1-205ENST00000463818 HOXD13P35453 343 aa20.3■□□□□ 0.84
SF3A1-205ENST00000463818 MAGEA9P43362 315 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms