RNA–Protein interactions for RNA: ENST00000463470.1

VPS72-203, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 1 (best)

Gene VPS72, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-203ENST00000463470 DDX42Q86XP3 938 aaKnown RBP eCLIP4.98□□□□□ -1.61
VPS72-203ENST00000463470 ERO1BQ86YB8 467 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 NT5DC4Q86YG4 428 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 TDRPQ86YL5 185 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 RIOX2Q8IUF8 465 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 BRSK2Q8IWQ3 736 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 SH2D3CQ8N5H7 860 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 NIPA2Q8N8Q9 360 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 REPS2Q8NFH8 660 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 IL31RAQ8NI17 732 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 FEZF2Q8TBJ5 459 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 FNIP1Q8TF40 1166 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 GTF3C2Q8WUA4 911 aaPredicted RBP4.98□□□□□ -1.61
VPS72-203ENST00000463470 DYDC1Q8WWB3 177 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 SEPT1Q8WYJ6 367 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 RAPGEF5Q92565 580 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 KRT35Q92764 455 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 SEMA4DQ92854 862 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 APBB2Q92870 758 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 GLG1Q92896 1179 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 C18orf8Q96DM3 657 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 SAAL1Q96ER3 474 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 SEC16BQ96JE7 1060 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 ZNF333Q96JL9 665 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 CCDC114Q96M63 670 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 FAM213AQ9BRX8 229 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 TRIM51Q9BSJ1 452 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 MSTO1Q9BUK6 570 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 CELF4Q9BZC1 486 aaKnown RBP4.98□□□□□ -1.61
VPS72-203ENST00000463470 OSBPL8Q9BZF1 889 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 TRIM31Q9BZY9 425 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 DCLK3Q9C098 648 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 NEUROG2Q9H2A3 272 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 GOLPH3Q9H4A6 298 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 ELP3Q9H9T3 547 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 PRM3Q9NNZ6 103 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 PPANQ9NQ55 473 aaKnown RBP4.98□□□□□ -1.61
VPS72-203ENST00000463470 NPDC1Q9NQX5 325 aaPredicted RBP4.98□□□□□ -1.61
VPS72-203ENST00000463470 HOMER2Q9NSB8 354 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 CYP39A1Q9NYL5 469 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 NKIRAS1Q9NYS0 192 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 RBAKQ9NYW8 714 aaPredicted RBP4.98□□□□□ -1.61
VPS72-203ENST00000463470 PCDH10Q9P2E7 1040 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 ASIC3Q9UHC3 531 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 LGALS13Q9UHV8 139 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 ZNF214Q9UL59 606 aaPredicted RBP4.98□□□□□ -1.61
VPS72-203ENST00000463470 KIAA1257Q9ULG3 409 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 PCDHGC3Q9UN70 934 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 SMG5Q9UPR3 1016 aaKnown RBP4.98□□□□□ -1.61
VPS72-203ENST00000463470 PCDHB4Q9Y5E5 795 aa4.98□□□□□ -1.61
VPS72-203ENST00000463470 POLR2AP24928 1970 aaKnown RBP4.98□□□□□ -1.61
VPS72-203ENST00000463470 CEP290O15078 2479 aa4.97□□□□□ -1.61
VPS72-203ENST00000463470 CCL15-CCL14A0A0B4J2E2 113 aa4.97□□□□□ -1.61
VPS72-203ENST00000463470 GSTTP1A0A1W2PQM5 241 aa4.97□□□□□ -1.61
VPS72-203ENST00000463470 GOLGA8IPA6NC78 632 aa4.97□□□□□ -1.61
VPS72-203ENST00000463470 LRRIQ4A6NIV6 560 aa4.97□□□□□ -1.61
VPS72-203ENST00000463470 CCT8L1PA6NM43 557 aa4.97□□□□□ -1.61
VPS72-203ENST00000463470 GOLGA8JA6NMD2 632 aa4.97□□□□□ -1.61
VPS72-203ENST00000463470 BTBD19C9JJ37 291 aa4.97□□□□□ -1.61
VPS72-203ENST00000463470 ANKRD63C9JTQ0 380 aa4.97□□□□□ -1.61
VPS72-203ENST00000463470 CHUKO15111 745 aa4.97□□□□□ -1.61
VPS72-203ENST00000463470 TLR3O15455 904 aaKnown RBP4.97□□□□□ -1.61
VPS72-203ENST00000463470 HNRNPCL1O60812 293 aaKnown RBP4.97□□□□□ -1.61
VPS72-203ENST00000463470 SPAG6O75602 509 aa4.97□□□□□ -1.61
VPS72-203ENST00000463470 DNAJC8O75937 253 aaPredicted RBP4.97□□□□□ -1.61
VPS72-203ENST00000463470 ASS1P00966 412 aaKnown RBP4.97□□□□□ -1.61
VPS72-203ENST00000463470 TNNC2P02585 160 aa4.97□□□□□ -1.61
VPS72-203ENST00000463470 ITGAVP06756 1048 aa4.97□□□□□ -1.61
VPS72-203ENST00000463470 CETPP11597 493 aa4.97□□□□□ -1.61
VPS72-203ENST00000463470 CHN1P15882 459 aa4.97□□□□□ -1.61
VPS72-203ENST00000463470 MMP8P22894 467 aa4.97□□□□□ -1.61
VPS72-203ENST00000463470 GNA15P30679 374 aa4.97□□□□□ -1.61
VPS72-203ENST00000463470 ALDH3A1P30838 453 aa4.97□□□□□ -1.61
VPS72-203ENST00000463470 ATICP31939 592 aa4.97□□□□□ -1.61
VPS72-203ENST00000463470 GBP2P32456 591 aaPredicted RBP4.97□□□□□ -1.61
VPS72-203ENST00000463470 CDH5P33151 784 aaPredicted RBP4.97□□□□□ -1.61
VPS72-203ENST00000463470 RPL21P46778 160 aaKnown RBP4.97□□□□□ -1.61
VPS72-203ENST00000463470 RASSF2P50749 326 aa4.97□□□□□ -1.61
VPS72-203ENST00000463470 STAT5BP51692 787 aa4.97□□□□□ -1.61
VPS72-203ENST00000463470 GSCP56915 257 aaPredicted RBP4.97□□□□□ -1.61
VPS72-203ENST00000463470 NOP14P78316 857 aaKnown RBP4.97□□□□□ -1.61
VPS72-203ENST00000463470 CDC42EP1Q00587 391 aa4.97□□□□□ -1.61
VPS72-203ENST00000463470 IL9RQ01113 521 aa4.97□□□□□ -1.61
VPS72-203ENST00000463470 RNASELQ05823 741 aaKnown RBP4.97□□□□□ -1.61
VPS72-203ENST00000463470 IFT88Q13099 833 aa4.97□□□□□ -1.61
VPS72-203ENST00000463470 KLF1Q13351 362 aaPredicted RBP4.97□□□□□ -1.61
VPS72-203ENST00000463470 PPIL2Q13356 520 aa4.97□□□□□ -1.61
VPS72-203ENST00000463470 MAMLD1Q13495 774 aa4.97□□□□□ -1.61
VPS72-203ENST00000463470 NCOA4Q13772 614 aa4.97□□□□□ -1.61
VPS72-203ENST00000463470 AUHQ13825 339 aaKnown RBP4.97□□□□□ -1.61
VPS72-203ENST00000463470 STILQ15468 1287 aa4.97□□□□□ -1.61
VPS72-203ENST00000463470 SIX1Q15475 284 aaPredicted RBP4.97□□□□□ -1.61
VPS72-203ENST00000463470 TRADDQ15628 312 aa4.97□□□□□ -1.61
VPS72-203ENST00000463470 MAPK6Q16659 721 aa4.97□□□□□ -1.61
VPS72-203ENST00000463470 CCL15Q16663 113 aa4.97□□□□□ -1.61
VPS72-203ENST00000463470 UGCGQ16739 394 aa4.97□□□□□ -1.61
VPS72-203ENST00000463470 ZNF568Q3ZCX4 644 aa4.97□□□□□ -1.61
VPS72-203ENST00000463470 MTERF2Q49AM1 385 aa4.97□□□□□ -1.61
VPS72-203ENST00000463470 SPDYAQ5MJ70 313 aa4.97□□□□□ -1.61
VPS72-203ENST00000463470 PLA2G4FQ68DD2 849 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms