RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 TRMT61BQ9BVS5 477 aaKnown RBP23.92■■□□□ 1.42
PDLIM7-206ENST00000463411 FGFBP2Q9BYJ0 223 aa23.92■■□□□ 1.42
PDLIM7-206ENST00000463411 BCO2Q9BYV7 579 aa23.92■■□□□ 1.42
PDLIM7-206ENST00000463411 ZCWPW1Q9H0M4 648 aa23.92■■□□□ 1.42
PDLIM7-206ENST00000463411 DLGAP2Q9P1A6 1054 aa23.92■■□□□ 1.42
PDLIM7-206ENST00000463411 ATP6V1DQ9Y5K8 247 aa23.92■■□□□ 1.42
PDLIM7-206ENST00000463411 MOSPD3O75425 235 aa23.91■■□□□ 1.42
PDLIM7-206ENST00000463411 GJA1P17302 382 aa23.91■■□□□ 1.42
PDLIM7-206ENST00000463411 POLR2BP30876 1174 aaKnown RBP23.91■■□□□ 1.42
PDLIM7-206ENST00000463411 ASIC1P78348 528 aa23.91■■□□□ 1.42
PDLIM7-206ENST00000463411 SMARCB1Q12824 385 aa23.91■■□□□ 1.42
PDLIM7-206ENST00000463411 GRM2Q14416 872 aa23.91■■□□□ 1.42
PDLIM7-206ENST00000463411 VEPH1Q14D04 833 aa23.91■■□□□ 1.42
PDLIM7-206ENST00000463411 TEAD2Q15562 447 aa23.91■■□□□ 1.42
PDLIM7-206ENST00000463411 E2F4Q16254 413 aa23.91■■□□□ 1.42
PDLIM7-206ENST00000463411 POTEHQ6S545 545 aa23.91■■□□□ 1.42
PDLIM7-206ENST00000463411 GPD1LQ8N335 351 aa23.91■■□□□ 1.42
PDLIM7-206ENST00000463411 SHKBP1Q8TBC3 707 aa23.91■■□□□ 1.42
PDLIM7-206ENST00000463411 FAM200AQ8TCP9 573 aa23.91■■□□□ 1.42
PDLIM7-206ENST00000463411 C2orf15Q8WU43 125 aaKnown RBP23.91■■□□□ 1.42
PDLIM7-206ENST00000463411 DEPDC1BQ8WUY9 529 aa23.91■■□□□ 1.42
PDLIM7-206ENST00000463411 E2F7Q96AV8 911 aa23.91■■□□□ 1.42
PDLIM7-206ENST00000463411 SEPT5Q99719 369 aaPredicted RBP23.91■■□□□ 1.42
PDLIM7-206ENST00000463411 CBWD1Q9BRT8 395 aa23.91■■□□□ 1.42
PDLIM7-206ENST00000463411 OSBPL6Q9BZF3 934 aa23.91■■□□□ 1.42
PDLIM7-206ENST00000463411 TRIM9Q9C026 710 aa23.91■■□□□ 1.42
PDLIM7-206ENST00000463411 DNAJC25Q9H1X3 360 aa23.91■■□□□ 1.42
PDLIM7-206ENST00000463411 KBTBD4Q9NVX7 518 aa23.91■■□□□ 1.42
PDLIM7-206ENST00000463411 COL4A3Q01955 1670 aa23.91■■□□□ 1.42
PDLIM7-206ENST00000463411 A0A1W2PRU2 124 aa23.9■■□□□ 1.42
PDLIM7-206ENST00000463411 GOLGA8IPA6NC78 632 aa23.9■■□□□ 1.42
PDLIM7-206ENST00000463411 PRR23AA6NEV1 266 aa23.9■■□□□ 1.42
PDLIM7-206ENST00000463411 GOLGA8JA6NMD2 632 aa23.9■■□□□ 1.42
PDLIM7-206ENST00000463411 ITGB3P05106 788 aa23.9■■□□□ 1.42
PDLIM7-206ENST00000463411 PSMC3P17980 439 aa23.9■■□□□ 1.42
PDLIM7-206ENST00000463411 MAGEA9P43362 315 aa23.9■■□□□ 1.42
PDLIM7-206ENST00000463411 MGAT5BQ3V5L5 792 aa23.9■■□□□ 1.42
PDLIM7-206ENST00000463411 WSCD1Q658N2 575 aa23.9■■□□□ 1.42
PDLIM7-206ENST00000463411 ATL3Q6DD88 541 aa23.9■■□□□ 1.42
PDLIM7-206ENST00000463411 TMC8Q8IU68 726 aa23.9■■□□□ 1.42
PDLIM7-206ENST00000463411 C1orf210Q8IVY1 113 aa23.9■■□□□ 1.42
PDLIM7-206ENST00000463411 TTC9BQ8N6N2 239 aa23.9■■□□□ 1.42
PDLIM7-206ENST00000463411 IRF7Q92985 503 aa23.9■■□□□ 1.42
PDLIM7-206ENST00000463411 PSMG2Q969U7 264 aa23.9■■□□□ 1.42
PDLIM7-206ENST00000463411 ZSWIM3Q96MP5 696 aa23.9■■□□□ 1.42
PDLIM7-206ENST00000463411 PCIF1Q9H4Z3 704 aa23.9■■□□□ 1.42
PDLIM7-206ENST00000463411 MAGEF1Q9HAY2 307 aa23.9■■□□□ 1.42
PDLIM7-206ENST00000463411 TRPV4Q9HBA0 871 aa23.9■■□□□ 1.42
PDLIM7-206ENST00000463411 LTB4R2Q9NPC1 389 aa23.9■■□□□ 1.42
PDLIM7-206ENST00000463411 ITGA11Q9UKX5 1188 aa23.9■■□□□ 1.42
PDLIM7-206ENST00000463411 AGAP1Q9UPQ3 857 aa23.9■■□□□ 1.42
PDLIM7-206ENST00000463411 MRPS17Q9Y2R5 130 aaKnown RBP23.9■■□□□ 1.42
PDLIM7-206ENST00000463411 R3HCC1Q9Y3T6 440 aaKnown RBP23.9■■□□□ 1.42
PDLIM7-206ENST00000463411 TMEM191BP0C7N4 346 aa23.89■■□□□ 1.41
PDLIM7-206ENST00000463411 TSPY1Q01534 308 aa23.89■■□□□ 1.41
PDLIM7-206ENST00000463411 FOXD4L6Q3SYB3 417 aaPredicted RBP23.89■■□□□ 1.41
PDLIM7-206ENST00000463411 ARHGAP15Q53QZ3 475 aa23.89■■□□□ 1.41
PDLIM7-206ENST00000463411 SHC4Q6S5L8 630 aa23.89■■□□□ 1.41
PDLIM7-206ENST00000463411 VITQ6UXI7 678 aa23.89■■□□□ 1.41
PDLIM7-206ENST00000463411 FOXD4L3Q6VB84 417 aaPredicted RBP23.89■■□□□ 1.41
PDLIM7-206ENST00000463411 ZNF852Q6ZMS4 543 aa23.89■■□□□ 1.41
PDLIM7-206ENST00000463411 DCP1BQ8IZD4 617 aaKnown RBP23.89■■□□□ 1.41
PDLIM7-206ENST00000463411 LRRC52Q8N7C0 313 aa23.89■■□□□ 1.41
PDLIM7-206ENST00000463411 ZSWIM2Q8NEG5 633 aa23.89■■□□□ 1.41
PDLIM7-206ENST00000463411 SPPL2BQ8TCT7 592 aa23.89■■□□□ 1.41
PDLIM7-206ENST00000463411 GCNAQ96QF7 691 aa23.89■■□□□ 1.41
PDLIM7-206ENST00000463411 NELL2Q99435 816 aa23.89■■□□□ 1.41
PDLIM7-206ENST00000463411 LRRC3Q9BY71 257 aa23.89■■□□□ 1.41
PDLIM7-206ENST00000463411 HEBP1Q9NRV9 189 aa23.89■■□□□ 1.41
PDLIM7-206ENST00000463411 FAM13BQ9NYF5 915 aa23.89■■□□□ 1.41
PDLIM7-206ENST00000463411 TICRRQ7Z2Z1 1910 aa23.88■■□□□ 1.41
PDLIM7-206ENST00000463411 NUP210Q8TEM1 1887 aaPredicted RBP23.88■■□□□ 1.41
PDLIM7-206ENST00000463411 FAM170BA6NMN3 283 aa23.88■■□□□ 1.41
PDLIM7-206ENST00000463411 NRG2O14511 850 aaPredicted RBP23.88■■□□□ 1.41
PDLIM7-206ENST00000463411 EIF3DO15371 548 aaKnown RBP eCLIP23.88■■□□□ 1.41
PDLIM7-206ENST00000463411 NCAM2O15394 837 aa23.88■■□□□ 1.41
PDLIM7-206ENST00000463411 HUS1O60921 280 aa23.88■■□□□ 1.41
PDLIM7-206ENST00000463411 SOAT2O75908 522 aa23.88■■□□□ 1.41
PDLIM7-206ENST00000463411 KRT19P08727 400 aa23.88■■□□□ 1.41
PDLIM7-206ENST00000463411 ME1P48163 572 aa23.88■■□□□ 1.41
PDLIM7-206ENST00000463411 WNT7BP56706 349 aa23.88■■□□□ 1.41
PDLIM7-206ENST00000463411 BFSP1Q12934 665 aa23.88■■□□□ 1.41
PDLIM7-206ENST00000463411 TAF12Q16514 161 aa23.88■■□□□ 1.41
PDLIM7-206ENST00000463411 ZC3H14Q6PJT7 736 aaKnown RBP23.88■■□□□ 1.41
PDLIM7-206ENST00000463411 ASCL5Q7RTU5 278 aa23.88■■□□□ 1.41
PDLIM7-206ENST00000463411 DNAJB7Q7Z6W7 309 aaPredicted RBP23.88■■□□□ 1.41
PDLIM7-206ENST00000463411 YAF2Q8IY57 180 aa23.88■■□□□ 1.41
PDLIM7-206ENST00000463411 C1orf127Q8N9H9 656 aa23.88■■□□□ 1.41
PDLIM7-206ENST00000463411 ANKRD36BP1Q96IX9 119 aa23.88■■□□□ 1.41
PDLIM7-206ENST00000463411 PATJQ8NI35 1801 aa23.88■■□□□ 1.41
PDLIM7-206ENST00000463411 LRRN2O75325 713 aa23.87■■□□□ 1.41
PDLIM7-206ENST00000463411 GLULP15104 373 aa23.87■■□□□ 1.41
PDLIM7-206ENST00000463411 CD72P21854 359 aa23.87■■□□□ 1.41
PDLIM7-206ENST00000463411 GDI1P31150 447 aa23.87■■□□□ 1.41
PDLIM7-206ENST00000463411 VIPR2P41587 438 aa23.87■■□□□ 1.41
PDLIM7-206ENST00000463411 SURF1Q15526 300 aa23.87■■□□□ 1.41
PDLIM7-206ENST00000463411 FAM26FQ5R3K3 315 aa23.87■■□□□ 1.41
PDLIM7-206ENST00000463411 CSGALNACT2Q8N6G5 542 aa23.87■■□□□ 1.41
PDLIM7-206ENST00000463411 BORCS6Q96GS4 357 aa23.87■■□□□ 1.41
PDLIM7-206ENST00000463411 MTMR12Q9C0I1 747 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms