RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 DSTYKQ6XUX3 929 aa15.33■□□□□ 0.04
COL6A1-202ENST00000463060 UNC93AQ86WB7 457 aa15.33■□□□□ 0.04
COL6A1-202ENST00000463060 OSTM1Q86WC4 334 aa15.33■□□□□ 0.04
COL6A1-202ENST00000463060 CRYBG2Q8N1P7 616 aa15.33■□□□□ 0.04
COL6A1-202ENST00000463060 FIBCD1Q8N539 461 aa15.33■□□□□ 0.04
COL6A1-202ENST00000463060 ZNF558Q96NG5 402 aa15.33■□□□□ 0.04
COL6A1-202ENST00000463060 TWNKQ96RR1 684 aa15.33■□□□□ 0.04
COL6A1-202ENST00000463060 RTP3Q9BQQ7 232 aa15.33■□□□□ 0.04
COL6A1-202ENST00000463060 ELOVL4Q9GZR5 314 aa15.33■□□□□ 0.04
COL6A1-202ENST00000463060 PCDHB4Q9Y5E5 795 aa15.33■□□□□ 0.04
COL6A1-202ENST00000463060 KIAA1671Q9BY89 1806 aa15.33■□□□□ 0.04
COL6A1-202ENST00000463060 LINC01553A4QN01 128 aa15.32■□□□□ 0.04
COL6A1-202ENST00000463060 GRXCR1A8MXD5 290 aa15.32■□□□□ 0.04
COL6A1-202ENST00000463060 TRAPPC3O43617 180 aa15.32■□□□□ 0.04
COL6A1-202ENST00000463060 ARHGEF15O94989 841 aa15.32■□□□□ 0.04
COL6A1-202ENST00000463060 OAZ2O95190 189 aa15.32■□□□□ 0.04
COL6A1-202ENST00000463060 CD58P19256 250 aa15.32■□□□□ 0.04
COL6A1-202ENST00000463060 FGFR3P22607 806 aa15.32■□□□□ 0.04
COL6A1-202ENST00000463060 LMO2P25791 158 aa15.32■□□□□ 0.04
COL6A1-202ENST00000463060 NDST1P52848 882 aa15.32■□□□□ 0.04
COL6A1-202ENST00000463060 RABGGTBP53611 331 aa15.32■□□□□ 0.04
COL6A1-202ENST00000463060 FUT10Q6P4F1 479 aa15.32■□□□□ 0.04
COL6A1-202ENST00000463060 TMEM270Q6UE05 265 aa15.32■□□□□ 0.04
COL6A1-202ENST00000463060 TAS1R1Q7RTX1 841 aa15.32■□□□□ 0.04
COL6A1-202ENST00000463060 FMNL3Q8IVF7 1028 aa15.32■□□□□ 0.04
COL6A1-202ENST00000463060 ADGRF2Q8IZF7 708 aa15.32■□□□□ 0.04
COL6A1-202ENST00000463060 SLC4A11Q8NBS3 891 aa15.32■□□□□ 0.04
COL6A1-202ENST00000463060 RBBP8NLQ8NC74 664 aaPredicted RBP15.32■□□□□ 0.04
COL6A1-202ENST00000463060 DDX1Q92499 740 aaKnown RBP15.32■□□□□ 0.04
COL6A1-202ENST00000463060 CHP1Q99653 195 aa15.32■□□□□ 0.04
COL6A1-202ENST00000463060 ACP6Q9NPH0 428 aa15.32■□□□□ 0.04
COL6A1-202ENST00000463060 SPG21Q9NZD8 308 aa15.32■□□□□ 0.04
COL6A1-202ENST00000463060 ARHGAP20Q9P2F6 1191 aa15.32■□□□□ 0.04
COL6A1-202ENST00000463060 HMGXB4Q9UGU5 601 aa15.32■□□□□ 0.04
COL6A1-202ENST00000463060 DSEQ9UL01 958 aa15.32■□□□□ 0.04
COL6A1-202ENST00000463060 STXBP5LQ9Y2K9 1186 aa15.32■□□□□ 0.04
COL6A1-202ENST00000463060 PCDHA11Q9Y5I1 949 aa15.32■□□□□ 0.04
COL6A1-202ENST00000463060 TSC2P49815 1807 aa15.31■□□□□ 0.04
COL6A1-202ENST00000463060 LAMA2P24043 3122 aaKnown RBP15.31■□□□□ 0.04
COL6A1-202ENST00000463060 SYN3O14994 580 aa15.31■□□□□ 0.04
COL6A1-202ENST00000463060 SERPING1P05155 500 aa15.31■□□□□ 0.04
COL6A1-202ENST00000463060 PAEPP09466 180 aa15.31■□□□□ 0.04
COL6A1-202ENST00000463060 ODC1P11926 461 aa15.31■□□□□ 0.04
COL6A1-202ENST00000463060 GNL1P36915 607 aaPredicted RBP15.31■□□□□ 0.04
COL6A1-202ENST00000463060 ELAVL2Q12926 359 aaKnown RBP15.31■□□□□ 0.04
COL6A1-202ENST00000463060 ASIC2Q16515 512 aa15.31■□□□□ 0.04
COL6A1-202ENST00000463060 ASTE1Q2TB18 679 aaPredicted RBP15.31■□□□□ 0.04
COL6A1-202ENST00000463060 SLC47A2Q86VL8 602 aa15.31■□□□□ 0.04
COL6A1-202ENST00000463060 EPS8L1Q8TE68 723 aa15.31■□□□□ 0.04
COL6A1-202ENST00000463060 TMEM176AQ96HP8 235 aa15.31■□□□□ 0.04
COL6A1-202ENST00000463060 ZSWIM1Q9BR11 485 aa15.31■□□□□ 0.04
COL6A1-202ENST00000463060 CHST7Q9NS84 486 aa15.31■□□□□ 0.04
COL6A1-202ENST00000463060 NOCTQ9UK39 431 aaKnown RBP15.31■□□□□ 0.04
COL6A1-202ENST00000463060 TIMM13Q9Y5L4 95 aaPredicted RBP15.31■□□□□ 0.04
COL6A1-202ENST00000463060 SF3B1O75533 1304 aaKnown RBP eCLIP15.31■□□□□ 0.04
COL6A1-202ENST00000463060 VWA8A3KMH1 1905 aa15.31■□□□□ 0.04
COL6A1-202ENST00000463060 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.3■□□□□ 0.04
COL6A1-202ENST00000463060 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.3■□□□□ 0.04
COL6A1-202ENST00000463060 ARHGEF37A1IGU5 675 aa15.3■□□□□ 0.04
COL6A1-202ENST00000463060 HCRTO43612 131 aa15.3■□□□□ 0.04
COL6A1-202ENST00000463060 TBC1D4O60343 1298 aa15.3■□□□□ 0.04
COL6A1-202ENST00000463060 CALCAP01258 141 aa15.3■□□□□ 0.04
COL6A1-202ENST00000463060 PLEKP08567 350 aaPredicted RBP15.3■□□□□ 0.04
COL6A1-202ENST00000463060 SKILP12757 684 aa15.3■□□□□ 0.04
COL6A1-202ENST00000463060 KRT5P13647 590 aa15.3■□□□□ 0.04
COL6A1-202ENST00000463060 MYOGP15173 224 aa15.3■□□□□ 0.04
COL6A1-202ENST00000463060 CYP11B1P15538 503 aa15.3■□□□□ 0.04
COL6A1-202ENST00000463060 CHRNB2P17787 502 aa15.3■□□□□ 0.04
COL6A1-202ENST00000463060 TKTP29401 623 aaKnown RBP15.3■□□□□ 0.04
COL6A1-202ENST00000463060 BMPR1AP36894 532 aa15.3■□□□□ 0.04
COL6A1-202ENST00000463060 USP8P40818 1118 aa15.3■□□□□ 0.04
COL6A1-202ENST00000463060 LHX1P48742 406 aa15.3■□□□□ 0.04
COL6A1-202ENST00000463060 BPIFB4P59827 614 aa15.3■□□□□ 0.04
COL6A1-202ENST00000463060 CCZ1BP86790 482 aa15.3■□□□□ 0.04
COL6A1-202ENST00000463060 CCZ1P86791 482 aaPredicted RBP15.3■□□□□ 0.04
COL6A1-202ENST00000463060 PLCB3Q01970 1234 aa15.3■□□□□ 0.04
COL6A1-202ENST00000463060 PTK2Q05397 1052 aa15.3■□□□□ 0.04
COL6A1-202ENST00000463060 MAPK8IP2Q13387 824 aaPredicted RBP15.3■□□□□ 0.04
COL6A1-202ENST00000463060 KIAA0319Q5VV43 1072 aa15.3■□□□□ 0.04
COL6A1-202ENST00000463060 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.3■□□□□ 0.04
COL6A1-202ENST00000463060 ZNF571Q7Z3V5 609 aaPredicted RBP15.3■□□□□ 0.04
COL6A1-202ENST00000463060 GPIHBP1Q8IV16 184 aa15.3■□□□□ 0.04
COL6A1-202ENST00000463060 OR6B3Q8NGW1 331 aa15.3■□□□□ 0.04
COL6A1-202ENST00000463060 TFAP2BQ92481 460 aa15.3■□□□□ 0.04
COL6A1-202ENST00000463060 NT5C1AQ9BXI3 368 aa15.3■□□□□ 0.04
COL6A1-202ENST00000463060 SNX25Q9H3E2 840 aa15.3■□□□□ 0.04
COL6A1-202ENST00000463060 KCNF1Q9H3M0 494 aa15.3■□□□□ 0.04
COL6A1-202ENST00000463060 HAUS4Q9H6D7 363 aa15.3■□□□□ 0.04
COL6A1-202ENST00000463060 AAASQ9NRG9 546 aa15.3■□□□□ 0.04
COL6A1-202ENST00000463060 KIAA1257Q9ULG3 409 aa15.3■□□□□ 0.04
COL6A1-202ENST00000463060 BZW2Q9Y6E2 419 aaKnown RBP15.3■□□□□ 0.04
COL6A1-202ENST00000463060 SSU72P8A0A1W2PR75 194 aa15.29■□□□□ 0.04
COL6A1-202ENST00000463060 C5orf67F2Z3F1 127 aa15.29■□□□□ 0.04
COL6A1-202ENST00000463060 CCDC172P0C7W6 258 aa15.29■□□□□ 0.04
COL6A1-202ENST00000463060 PPM1AP35813 382 aa15.29■□□□□ 0.04
COL6A1-202ENST00000463060 ARID5AQ03989 594 aa15.29■□□□□ 0.04
COL6A1-202ENST00000463060 KLHL30Q0D2K2 578 aa15.29■□□□□ 0.04
COL6A1-202ENST00000463060 TSR1Q2NL82 804 aaKnown RBP15.29■□□□□ 0.04
COL6A1-202ENST00000463060 ZNF394Q53GI3 561 aa15.29■□□□□ 0.04
COL6A1-202ENST00000463060 SPOUT1Q5T280 376 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms