RNA–Protein interactions for RNA: ENST00000462968.2

CD46-210, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-210ENST00000462968 TMX2Q9Y320 296 aa3.42□□□□□ -1.86
CD46-210ENST00000462968 PCDHGA2Q9Y5H1 932 aa3.42□□□□□ -1.86
CD46-210ENST00000462968 MYH3P11055 1940 aa3.42□□□□□ -1.86
CD46-210ENST00000462968 DLG5Q8TDM6 1919 aa3.42□□□□□ -1.86
CD46-210ENST00000462968 RAD50Q92878 1312 aa3.42□□□□□ -1.86
CD46-210ENST00000462968 FRYQ5TBA9 3013 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 NPHP3-ACAD11A0A0J9YXS1 232 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 C2orf71A6NGG8 1288 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 PER2O15055 1255 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 NPHS1O60500 1241 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 IGSF3O75054 1194 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 ZBED4O75132 1171 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 CIAO1O76071 339 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 TP53P04637 393 aaPredicted RBP3.41□□□□□ -1.86
CD46-210ENST00000462968 ITGB1P05556 798 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 PAMP19021 973 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 DNAJB1P25685 340 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 ADORA1P30542 326 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 MCM4P33991 863 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 TECP42680 631 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 RFX5P48382 616 aaPredicted RBP3.41□□□□□ -1.86
CD46-210ENST00000462968 SEPHS1P49903 392 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 CNTN2Q02246 1040 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 ITIH3Q06033 890 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 APOBRQ0VD83 1088 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 TDGQ13569 410 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 PPP2R5DQ14738 602 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 MVPQ14764 893 aaKnown RBP3.41□□□□□ -1.86
CD46-210ENST00000462968 PLEKHG4Q58EX7 1191 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 SPECC1Q5M775 1068 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 TMEM63BQ5T3F8 832 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 ZNF618Q5T7W0 954 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 AGBL4Q5VU57 503 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 IL31Q6EBC2 164 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.41□□□□□ -1.86
CD46-210ENST00000462968 NAA16Q6N069 864 aaPredicted RBP3.41□□□□□ -1.86
CD46-210ENST00000462968 CES5AQ6NT32 575 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 ANKRD54Q6NXT1 300 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 SYCE2Q6PIF2 218 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 RUFY4Q6ZNE9 571 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 EEPD1Q7L9B9 569 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 CERS3Q8IU89 383 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 SLITRK4Q8IW52 837 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 FBXO16Q8IX29 292 aaPredicted RBP3.41□□□□□ -1.86
CD46-210ENST00000462968 MAML2Q8IZL2 1156 aaPredicted RBP3.41□□□□□ -1.86
CD46-210ENST00000462968 CPXCR1Q8N123 301 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 TDRD5Q8NAT2 981 aaKnown RBP3.41□□□□□ -1.86
CD46-210ENST00000462968 SPATA5Q8NB90 893 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 VN1R2Q8NFZ6 395 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 SPPL3Q8TCT6 385 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 POF1BQ8WVV4 589 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 SEPT8Q92599 483 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 ZSWIM3Q96MP5 696 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 WDR11Q9BZH6 1224 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 BARX1Q9HBU1 254 aaPredicted RBP3.41□□□□□ -1.86
CD46-210ENST00000462968 VTA1Q9NP79 307 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 HMG20BQ9P0W2 317 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 DLGAP2Q9P1A6 1054 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 WNT16Q9UBV4 365 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 FTSJ1Q9UET6 329 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 ADAMTS1Q9UHI8 967 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 FBXO4Q9UKT5 387 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 DUSP12Q9UNI6 340 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 CTDP1Q9Y5B0 961 aaPredicted RBP3.41□□□□□ -1.86
CD46-210ENST00000462968 BACE2Q9Y5Z0 518 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.41□□□□□ -1.86
CD46-210ENST00000462968 GCN1Q92616 2671 aaKnown RBP3.41□□□□□ -1.86
CD46-210ENST00000462968 CEP250Q9BV73 2442 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 ADGRA3Q8IWK6 1321 aa3.41□□□□□ -1.86
CD46-210ENST00000462968 LOC400499M0QZD8 3231 aa3.4□□□□□ -1.86
CD46-210ENST00000462968 TRBV23OR9-2A0A075B6M9 112 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.4□□□□□ -1.87
CD46-210ENST00000462968 ANKRD33BA6NCL7 494 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 RSPH10B2B2RC85 870 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 E9PSI1 815 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 NKRFO15226 690 aaKnown RBP eCLIP3.4□□□□□ -1.87
CD46-210ENST00000462968 LRP3O75074 770 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 CYP7B1O75881 506 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 DCNP07585 359 aaKnown RBP3.4□□□□□ -1.87
CD46-210ENST00000462968 MMP3P08254 477 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 RSPH10BP0C881 870 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 FBLP22087 321 aaKnown RBP3.4□□□□□ -1.87
CD46-210ENST00000462968 IL15P40933 162 aaPredicted RBP3.4□□□□□ -1.87
CD46-210ENST00000462968 MTHFRP42898 656 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 OAZ1P54368 228 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 TIMM10P62072 90 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 ICA1Q05084 483 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 GABPAQ06546 454 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 KCNC3Q14003 757 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 BTG3Q14201 252 aaPredicted RBP3.4□□□□□ -1.87
CD46-210ENST00000462968 CSRP2Q16527 193 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 DUSP6Q16828 381 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 TRIM71Q2Q1W2 868 aaKnown RBP3.4□□□□□ -1.87
CD46-210ENST00000462968 FAM83BQ5T0W9 1011 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 FNDC7Q5VTL7 733 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 MBLAC2Q68D91 279 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 SLC4A10Q6U841 1118 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 C7orf31Q8N865 590 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 PRPF38AQ8NAV1 312 aaKnown RBP3.4□□□□□ -1.87
CD46-210ENST00000462968 ZBTB44Q8NCP5 570 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms