RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 PHLDB2Q86SQ0 1253 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 PRUNE1Q86TP1 453 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 NLRX1Q86UT6 975 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 PHF13Q86YI8 300 aaPredicted RBP3.71□□□□□ -1.82
COL8A1-204ENST00000462604 PASD1Q8IV76 773 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 TRIM42Q8IWZ5 723 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 PPIL6Q8IXY8 311 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.71□□□□□ -1.82
COL8A1-204ENST00000462604 ANKRD13AQ8IZ07 590 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 ZBED8Q8IZ13 594 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 KIRREL3Q8IZU9 778 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 ABRAQ8N0Z2 381 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 C4orf33Q8N1A6 199 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 VPS52Q8N1B4 723 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 NLGN1Q8N2Q7 840 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 OGFOD1Q8N543 542 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 TTC13Q8NBP0 860 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 RBBP8NLQ8NC74 664 aaPredicted RBP3.71□□□□□ -1.82
COL8A1-204ENST00000462604 PPFIBP2Q8ND30 876 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 ZSWIM2Q8NEG5 633 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 SUPT20HQ8NEM7 779 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 FEZF2Q8TBJ5 459 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 ASAP3Q8TDY4 903 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 DENND1AQ8TEH3 1009 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 FAM151AQ8WW52 585 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 DNAJC9Q8WXX5 260 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 ZNF75CPQ92670 426 aaPredicted RBP3.71□□□□□ -1.82
COL8A1-204ENST00000462604 STMN2Q93045 179 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 ATP6V0A1Q93050 837 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 UTP4Q969X6 686 aaKnown RBP3.71□□□□□ -1.82
COL8A1-204ENST00000462604 MCUR1Q96AQ8 359 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 CEP170P1Q96L14 293 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 FBXL18Q96ME1 805 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 PWWP2AQ96N64 755 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 SLITRK1Q96PX8 696 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 FAM118BQ9BPY3 351 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 SENP7Q9BQF6 1050 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 HERPUD2Q9BSE4 406 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 FAM167BQ9BTA0 163 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 KIFC3Q9BVG8 833 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 TMUB1Q9BVT8 246 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 TRIM55Q9BYV6 548 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 IMPG2Q9BZV3 1241 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 CRISPLD2Q9H0B8 497 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 POLR3FQ9H1D9 316 aaPredicted RBP3.71□□□□□ -1.82
COL8A1-204ENST00000462604 VCXQ9H320 206 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 TDRD3Q9H7E2 651 aaKnown RBP3.71□□□□□ -1.82
COL8A1-204ENST00000462604 TLE6Q9H808 572 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 DCLRE1BQ9H816 532 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 NPHS2Q9NP85 383 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 ACP6Q9NPH0 428 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 GPRC5CQ9NQ84 441 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.71□□□□□ -1.82
COL8A1-204ENST00000462604 EURLQ9NYK6 297 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 MAP3K20Q9NYL2 800 aaKnown RBP3.71□□□□□ -1.82
COL8A1-204ENST00000462604 FETUBQ9UGM5 382 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 LNPEPQ9UIQ6 1025 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 HAO1Q9UJM8 370 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 USP21Q9UK80 565 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 AGTPBP1Q9UPW5 1226 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 GNEQ9Y223 722 aaKnown RBP3.71□□□□□ -1.82
COL8A1-204ENST00000462604 CHKBQ9Y259 395 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 DRG1Q9Y295 367 aaKnown RBP3.71□□□□□ -1.82
COL8A1-204ENST00000462604 MTO1Q9Y2Z2 717 aaKnown RBP3.71□□□□□ -1.82
COL8A1-204ENST00000462604 LRRC42Q9Y546 428 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 PCDHB4Q9Y5E5 795 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 PCDHAC2Q9Y5I4 1007 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 IKBKGQ9Y6K9 419 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 MYH6P13533 1939 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 STRCQ7RTU9 1775 aa3.71□□□□□ -1.82
COL8A1-204ENST00000462604 ASTN2O75129 1339 aaPredicted RBP3.7□□□□□ -1.82
COL8A1-204ENST00000462604 QSER1Q2KHR3 1735 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 hCG_1818297A0A087WSY0 165 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 IQANK1A0A1B0GTG1 560 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 CCDC189A1A4V9 331 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 A6NHS1 94 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 TMEM88BA6NKF7 163 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 TCP10L2B9ZVM9 353 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 I3L4J1 428 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 NFIBO00712 420 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 WDR46O15213 610 aaKnown RBP3.7□□□□□ -1.82
COL8A1-204ENST00000462604 DHX15O43143 795 aaKnown RBP3.7□□□□□ -1.82
COL8A1-204ENST00000462604 MAP3K7O43318 606 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 AHCYL1O43865 530 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 TYROBPO43914 113 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 CCDC22O60826 627 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 DNAJC6O75061 913 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 SKAP2O75563 359 aaPredicted RBP3.7□□□□□ -1.82
COL8A1-204ENST00000462604 SPAG6O75602 509 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 CIB2O75838 187 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 DGAT1O75907 488 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 NPTXRO95502 500 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 CBX6O95503 412 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 CALCAP01258 141 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 IFNB1P01574 187 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 ITGAVP06756 1048 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 PSAPP07602 524 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 GSTA2P09210 222 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 TPBGLP0DKB5 382 aa3.7□□□□□ -1.82
COL8A1-204ENST00000462604 MYCLP12524 364 aaPredicted RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms