RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 CTXN3Q4LDR2 81 aa12.64□□□□□ -0.39
CPNE1-221ENST00000462352 WDR44Q5JSH3 913 aa12.64□□□□□ -0.39
CPNE1-221ENST00000462352 SCARA5Q6ZMJ2 495 aa12.64□□□□□ -0.39
CPNE1-221ENST00000462352 GLYCTKQ8IVS8 523 aa12.64□□□□□ -0.39
CPNE1-221ENST00000462352 ADGRF2Q8IZF7 708 aa12.64□□□□□ -0.39
CPNE1-221ENST00000462352 ANKRD20A12PQ8NF67 263 aa12.64□□□□□ -0.39
CPNE1-221ENST00000462352 LMO3Q8TAP4 145 aa12.64□□□□□ -0.39
CPNE1-221ENST00000462352 KBTBD7Q8WVZ9 684 aa12.64□□□□□ -0.39
CPNE1-221ENST00000462352 CDCA3Q99618 268 aaPredicted RBP12.64□□□□□ -0.39
CPNE1-221ENST00000462352 RTP3Q9BQQ7 232 aa12.64□□□□□ -0.39
CPNE1-221ENST00000462352 IGFLR1Q9H665 355 aa12.64□□□□□ -0.39
CPNE1-221ENST00000462352 SMYD3Q9H7B4 428 aa12.64□□□□□ -0.39
CPNE1-221ENST00000462352 FBXL5Q9UKA1 691 aa12.64□□□□□ -0.39
CPNE1-221ENST00000462352 CDY1Q9Y6F8 540 aa12.64□□□□□ -0.39
CPNE1-221ENST00000462352 PES1O00541 588 aaKnown RBP12.63□□□□□ -0.39
CPNE1-221ENST00000462352 GABRDO14764 452 aa12.63□□□□□ -0.39
CPNE1-221ENST00000462352 ADH1AP07327 375 aa12.63□□□□□ -0.39
CPNE1-221ENST00000462352 FAM163BP0C2L3 166 aa12.63□□□□□ -0.39
CPNE1-221ENST00000462352 WARSP23381 471 aaKnown RBP12.63□□□□□ -0.39
CPNE1-221ENST00000462352 OR1D2P34982 312 aa12.63□□□□□ -0.39
CPNE1-221ENST00000462352 LHX1P48742 406 aa12.63□□□□□ -0.39
CPNE1-221ENST00000462352 COPB1P53618 953 aaKnown RBP12.63□□□□□ -0.39
CPNE1-221ENST00000462352 CDH8P55286 799 aa12.63□□□□□ -0.39
CPNE1-221ENST00000462352 LRMPQ12912 555 aa12.63□□□□□ -0.39
CPNE1-221ENST00000462352 CCDC85BQ15834 202 aaPredicted RBP12.63□□□□□ -0.39
CPNE1-221ENST00000462352 SLC8B1Q6J4K2 584 aa12.63□□□□□ -0.39
CPNE1-221ENST00000462352 OSTM1Q86WC4 334 aa12.63□□□□□ -0.39
CPNE1-221ENST00000462352 THEM5Q8N1Q8 247 aa12.63□□□□□ -0.39
CPNE1-221ENST00000462352 EHBP1Q8NDI1 1231 aa12.63□□□□□ -0.39
CPNE1-221ENST00000462352 SPATA18Q8TC71 538 aa12.63□□□□□ -0.39
CPNE1-221ENST00000462352 TATDN2Q93075 761 aa12.63□□□□□ -0.39
CPNE1-221ENST00000462352 MRPL45Q9BRJ2 306 aaKnown RBP12.63□□□□□ -0.39
CPNE1-221ENST00000462352 CRACR2AQ9BSW2 395 aa12.63□□□□□ -0.39
CPNE1-221ENST00000462352 OXCT2Q9BYC2 517 aaPredicted RBP12.63□□□□□ -0.39
CPNE1-221ENST00000462352 NIF3L1Q9GZT8 377 aa12.63□□□□□ -0.39
CPNE1-221ENST00000462352 VPS16Q9H269 839 aa12.63□□□□□ -0.39
CPNE1-221ENST00000462352 DDX43Q9NXZ2 648 aaKnown RBP12.63□□□□□ -0.39
CPNE1-221ENST00000462352 GCNT4Q9P109 453 aa12.63□□□□□ -0.39
CPNE1-221ENST00000462352 GTPBP10A4D1E9 387 aaKnown RBP12.62□□□□□ -0.39
CPNE1-221ENST00000462352 LRRC10BA6NIK2 292 aa12.62□□□□□ -0.39
CPNE1-221ENST00000462352 OR6C75A6NL08 312 aa12.62□□□□□ -0.39
CPNE1-221ENST00000462352 GOLGA6L19H0YKK7 550 aa12.62□□□□□ -0.39
CPNE1-221ENST00000462352 HCRTO43612 131 aa12.62□□□□□ -0.39
CPNE1-221ENST00000462352 TPM2P07951 284 aa12.62□□□□□ -0.39
CPNE1-221ENST00000462352 WEE2P0C1S8 567 aa12.62□□□□□ -0.39
CPNE1-221ENST00000462352 RAP1GAPP47736 663 aa12.62□□□□□ -0.39
CPNE1-221ENST00000462352 CLCN4P51793 760 aa12.62□□□□□ -0.39
CPNE1-221ENST00000462352 ARPP19P56211 112 aa12.62□□□□□ -0.39
CPNE1-221ENST00000462352 TPM4P67936 248 aa12.62□□□□□ -0.39
CPNE1-221ENST00000462352 ROR1Q01973 937 aa12.62□□□□□ -0.39
CPNE1-221ENST00000462352 EXOC3L4Q17RC7 722 aa12.62□□□□□ -0.39
CPNE1-221ENST00000462352 GBP6Q6ZN66 633 aa12.62□□□□□ -0.39
CPNE1-221ENST00000462352 APTXQ7Z2E3 356 aaKnown RBP12.62□□□□□ -0.39
CPNE1-221ENST00000462352 PPFIBP1Q86W92 1011 aa12.62□□□□□ -0.39
CPNE1-221ENST00000462352 PALB2Q86YC2 1186 aa12.62□□□□□ -0.39
CPNE1-221ENST00000462352 OR6B3Q8NGW1 331 aa12.62□□□□□ -0.39
CPNE1-221ENST00000462352 OR10T2Q8NGX3 314 aa12.62□□□□□ -0.39
CPNE1-221ENST00000462352 PPM1EQ8WY54 764 aa12.62□□□□□ -0.39
CPNE1-221ENST00000462352 FAXDC2Q96IV6 333 aa12.62□□□□□ -0.39
CPNE1-221ENST00000462352 NT5C1BQ96P26 610 aa12.62□□□□□ -0.39
CPNE1-221ENST00000462352 TMEM209Q96SK2 561 aa12.62□□□□□ -0.39
CPNE1-221ENST00000462352 ACBD6Q9BR61 282 aa12.62□□□□□ -0.39
CPNE1-221ENST00000462352 BCO2Q9BYV7 579 aa12.62□□□□□ -0.39
CPNE1-221ENST00000462352 INTS2Q9H0H0 1204 aaKnown RBP12.62□□□□□ -0.39
CPNE1-221ENST00000462352 SDCBP2Q9H190 292 aa12.62□□□□□ -0.39
CPNE1-221ENST00000462352 SNX25Q9H3E2 840 aa12.62□□□□□ -0.39
CPNE1-221ENST00000462352 HCFC2Q9Y5Z7 792 aa12.62□□□□□ -0.39
CPNE1-221ENST00000462352 FSD2A1L4K1 749 aa12.61□□□□□ -0.39
CPNE1-221ENST00000462352 WDR27A2RRH5 827 aa12.61□□□□□ -0.39
CPNE1-221ENST00000462352 LINC01565O15544 149 aa12.61□□□□□ -0.39
CPNE1-221ENST00000462352 TGM5O43548 720 aa12.61□□□□□ -0.39
CPNE1-221ENST00000462352 GLUD1P00367 558 aa12.61□□□□□ -0.39
CPNE1-221ENST00000462352 OR4Q2P0C623 313 aa12.61□□□□□ -0.39
CPNE1-221ENST00000462352 CPB1P15086 417 aa12.61□□□□□ -0.39
CPNE1-221ENST00000462352 EPCAMP16422 314 aa12.61□□□□□ -0.39
CPNE1-221ENST00000462352 SLC9A1P19634 815 aa12.61□□□□□ -0.39
CPNE1-221ENST00000462352 ACAT1P24752 427 aaKnown RBP12.61□□□□□ -0.39
CPNE1-221ENST00000462352 LMO2P25791 158 aa12.61□□□□□ -0.39
CPNE1-221ENST00000462352 GNL1P36915 607 aaPredicted RBP12.61□□□□□ -0.39
CPNE1-221ENST00000462352 RBM10P98175 930 aaKnown RBP12.61□□□□□ -0.39
CPNE1-221ENST00000462352 CUL2Q13617 745 aa12.61□□□□□ -0.39
CPNE1-221ENST00000462352 KCNC3Q14003 757 aa12.61□□□□□ -0.39
CPNE1-221ENST00000462352 RAB33AQ14088 237 aa12.61□□□□□ -0.39
CPNE1-221ENST00000462352 LLGL2Q6P1M3 1020 aa12.61□□□□□ -0.39
CPNE1-221ENST00000462352 LILRA6Q6PI73 481 aa12.61□□□□□ -0.39
CPNE1-221ENST00000462352 TRIM65Q6PJ69 517 aa12.61□□□□□ -0.39
CPNE1-221ENST00000462352 EFHBQ8N7U6 833 aa12.61□□□□□ -0.39
CPNE1-221ENST00000462352 RNF214Q8ND24 703 aa12.61□□□□□ -0.39
CPNE1-221ENST00000462352 VN1R2Q8NFZ6 395 aa12.61□□□□□ -0.39
CPNE1-221ENST00000462352 SLC22A17Q8WUG5 538 aa12.61□□□□□ -0.39
CPNE1-221ENST00000462352 ARID3AQ99856 593 aa12.61□□□□□ -0.39
CPNE1-221ENST00000462352 ZCWPW1Q9H0M4 648 aa12.61□□□□□ -0.39
CPNE1-221ENST00000462352 CYP3A43Q9HB55 503 aa12.61□□□□□ -0.39
CPNE1-221ENST00000462352 STXBP5LQ9Y2K9 1186 aa12.61□□□□□ -0.39
CPNE1-221ENST00000462352 NME7Q9Y5B8 376 aa12.61□□□□□ -0.39
CPNE1-221ENST00000462352 LGALS16A8MUM7 142 aa12.6□□□□□ -0.39
CPNE1-221ENST00000462352 A8MXQ7 604 aa12.6□□□□□ -0.39
CPNE1-221ENST00000462352 NCK2O43639 380 aa12.6□□□□□ -0.39
CPNE1-221ENST00000462352 ABLIM3O94929 683 aa12.6□□□□□ -0.39
CPNE1-221ENST00000462352 GLP2RO95838 553 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms