RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 CYP4F11Q9HBI6 524 aa17.04■□□□□ 0.32
ERCC3-206ENST00000462306 WDR6Q9NNW5 1121 aaKnown RBP17.04■□□□□ 0.32
ERCC3-206ENST00000462306 KIAA1468Q9P260 1216 aa17.04■□□□□ 0.32
ERCC3-206ENST00000462306 R3HCC1Q9Y3T6 440 aaKnown RBP17.04■□□□□ 0.32
ERCC3-206ENST00000462306 TRIM49BA6NDI0 452 aa17.03■□□□□ 0.32
ERCC3-206ENST00000462306 IKBKBO14920 756 aa17.03■□□□□ 0.32
ERCC3-206ENST00000462306 CCL16O15467 120 aa17.03■□□□□ 0.32
ERCC3-206ENST00000462306 STAU1O95793 577 aaKnown RBP17.03■□□□□ 0.32
ERCC3-206ENST00000462306 SP100P23497 879 aaPredicted RBP17.03■□□□□ 0.32
ERCC3-206ENST00000462306 CCNE1P24864 410 aa17.03■□□□□ 0.32
ERCC3-206ENST00000462306 ELF1P32519 619 aa17.03■□□□□ 0.32
ERCC3-206ENST00000462306 VAMP7P51809 220 aa17.03■□□□□ 0.32
ERCC3-206ENST00000462306 MYL6P60660 151 aa17.03■□□□□ 0.32
ERCC3-206ENST00000462306 ENPEPQ07075 957 aa17.03■□□□□ 0.32
ERCC3-206ENST00000462306 INTS8Q75QN2 995 aaKnown RBP17.03■□□□□ 0.32
ERCC3-206ENST00000462306 DPH6Q7L8W6 267 aa17.03■□□□□ 0.32
ERCC3-206ENST00000462306 THEM5Q8N1Q8 247 aa17.03■□□□□ 0.32
ERCC3-206ENST00000462306 TMEM86AQ8N2M4 240 aa17.03■□□□□ 0.32
ERCC3-206ENST00000462306 DHTKD1Q96HY7 919 aaPredicted RBP17.03■□□□□ 0.32
ERCC3-206ENST00000462306 GBP4Q96PP9 640 aa17.03■□□□□ 0.32
ERCC3-206ENST00000462306 MKNK1Q9BUB5 465 aa17.03■□□□□ 0.32
ERCC3-206ENST00000462306 XYLT2Q9H1B5 865 aa17.03■□□□□ 0.32
ERCC3-206ENST00000462306 CLSTN2Q9H4D0 955 aa17.03■□□□□ 0.32
ERCC3-206ENST00000462306 PIDD1Q9HB75 910 aa17.03■□□□□ 0.32
ERCC3-206ENST00000462306 CLUHO75153 1309 aa17.02■□□□□ 0.32
ERCC3-206ENST00000462306 C2CD4DB7Z1M9 353 aa17.02■□□□□ 0.32
ERCC3-206ENST00000462306 PRRG1O14668 218 aa17.02■□□□□ 0.32
ERCC3-206ENST00000462306 GABRDO14764 452 aa17.02■□□□□ 0.32
ERCC3-206ENST00000462306 PSMA7O14818 248 aa17.02■□□□□ 0.32
ERCC3-206ENST00000462306 CETN3O15182 167 aa17.02■□□□□ 0.32
ERCC3-206ENST00000462306 XYLBO75191 536 aa17.02■□□□□ 0.32
ERCC3-206ENST00000462306 VNN1O95497 513 aa17.02■□□□□ 0.32
ERCC3-206ENST00000462306 PPP1R2P41236 205 aa17.02■□□□□ 0.32
ERCC3-206ENST00000462306 LRRC63Q05C16 580 aa17.02■□□□□ 0.32
ERCC3-206ENST00000462306 STIM1Q13586 685 aa17.02■□□□□ 0.32
ERCC3-206ENST00000462306 ZACNQ401N2 412 aa17.02■□□□□ 0.32
ERCC3-206ENST00000462306 SV2AQ7L0J3 742 aa17.02■□□□□ 0.32
ERCC3-206ENST00000462306 LRRTM3Q86VH5 581 aa17.02■□□□□ 0.32
ERCC3-206ENST00000462306 OSTM1Q86WC4 334 aa17.02■□□□□ 0.32
ERCC3-206ENST00000462306 SPATA18Q8TC71 538 aa17.02■□□□□ 0.32
ERCC3-206ENST00000462306 PGLYRP2Q96PD5 576 aa17.02■□□□□ 0.32
ERCC3-206ENST00000462306 TSG101Q99816 390 aa17.02■□□□□ 0.32
ERCC3-206ENST00000462306 CRISPLD1Q9H336 500 aa17.02■□□□□ 0.32
ERCC3-206ENST00000462306 USTQ9Y2C2 406 aa17.02■□□□□ 0.32
ERCC3-206ENST00000462306 NR2E1Q9Y466 385 aa17.02■□□□□ 0.32
ERCC3-206ENST00000462306 INSL5Q9Y5Q6 135 aa17.02■□□□□ 0.32
ERCC3-206ENST00000462306 MTMR11A4FU01 709 aa17.01■□□□□ 0.31
ERCC3-206ENST00000462306 N4BP1O75113 896 aaKnown RBP17.01■□□□□ 0.31
ERCC3-206ENST00000462306 PHACTR2O75167 634 aa17.01■□□□□ 0.31
ERCC3-206ENST00000462306 TRIM49P0CI25 452 aa17.01■□□□□ 0.31
ERCC3-206ENST00000462306 TRIM49CP0CI26 452 aa17.01■□□□□ 0.31
ERCC3-206ENST00000462306 KRT13P13646 458 aa17.01■□□□□ 0.31
ERCC3-206ENST00000462306 ATICP31939 592 aa17.01■□□□□ 0.31
ERCC3-206ENST00000462306 NTHL1P78549 312 aa17.01■□□□□ 0.31
ERCC3-206ENST00000462306 FKBP3Q00688 224 aaKnown RBP17.01■□□□□ 0.31
ERCC3-206ENST00000462306 PPP3CAQ08209 521 aa17.01■□□□□ 0.31
ERCC3-206ENST00000462306 BIRC3Q13489 604 aa17.01■□□□□ 0.31
ERCC3-206ENST00000462306 TRPC3Q13507 836 aa17.01■□□□□ 0.31
ERCC3-206ENST00000462306 SLC39A12Q504Y0 691 aa17.01■□□□□ 0.31
ERCC3-206ENST00000462306 GRASPQ7Z6J2 395 aaPredicted RBP17.01■□□□□ 0.31
ERCC3-206ENST00000462306 RNF135Q8IUD6 432 aa17.01■□□□□ 0.31
ERCC3-206ENST00000462306 ADGRF2Q8IZF7 708 aa17.01■□□□□ 0.31
ERCC3-206ENST00000462306 TRIML1Q8N9V2 468 aa17.01■□□□□ 0.31
ERCC3-206ENST00000462306 ATAD1Q8NBU5 361 aa17.01■□□□□ 0.31
ERCC3-206ENST00000462306 KBTBD7Q8WVZ9 684 aa17.01■□□□□ 0.31
ERCC3-206ENST00000462306 ACBD6Q9BR61 282 aa17.01■□□□□ 0.31
ERCC3-206ENST00000462306 VRTNQ9H8Y1 702 aa17.01■□□□□ 0.31
ERCC3-206ENST00000462306 DDX43Q9NXZ2 648 aaKnown RBP17.01■□□□□ 0.31
ERCC3-206ENST00000462306 SLC16A3O15427 465 aaKnown RBP17■□□□□ 0.31
ERCC3-206ENST00000462306 HCRTO43612 131 aa17■□□□□ 0.31
ERCC3-206ENST00000462306 LRG1P02750 347 aa17■□□□□ 0.31
ERCC3-206ENST00000462306 LHX1P48742 406 aa17■□□□□ 0.31
ERCC3-206ENST00000462306 DUSP4Q13115 394 aa17■□□□□ 0.31
ERCC3-206ENST00000462306 NCOA4Q13772 614 aa17■□□□□ 0.31
ERCC3-206ENST00000462306 WDR72Q3MJ13 1102 aa17■□□□□ 0.31
ERCC3-206ENST00000462306 KLHL10Q6JEL2 608 aa17■□□□□ 0.31
ERCC3-206ENST00000462306 TTI2Q6NXR4 508 aa17■□□□□ 0.31
ERCC3-206ENST00000462306 FOXR2Q6PJQ5 311 aa17■□□□□ 0.31
ERCC3-206ENST00000462306 OTOP3Q7RTS5 596 aa17■□□□□ 0.31
ERCC3-206ENST00000462306 TTC9BQ8N6N2 239 aa17■□□□□ 0.31
ERCC3-206ENST00000462306 SYAP1Q96A49 352 aaPredicted RBP17■□□□□ 0.31
ERCC3-206ENST00000462306 PKMYT1Q99640 499 aa17■□□□□ 0.31
ERCC3-206ENST00000462306 DUSP9Q99956 384 aaKnown RBP17■□□□□ 0.31
ERCC3-206ENST00000462306 TMLHEQ9NVH6 421 aa17■□□□□ 0.31
ERCC3-206ENST00000462306 HCFC1R1Q9NWW0 138 aa17■□□□□ 0.31
ERCC3-206ENST00000462306 DNMT3BQ9UBC3 853 aaKnown RBP17■□□□□ 0.31
ERCC3-206ENST00000462306 POLIQ9UNA4 740 aa17■□□□□ 0.31
ERCC3-206ENST00000462306 YIPF1Q9Y548 306 aa17■□□□□ 0.31
ERCC3-206ENST00000462306 DOCK6Q96HP0 2047 aa16.99■□□□□ 0.31
ERCC3-206ENST00000462306 TACC1O75410 805 aa16.99■□□□□ 0.31
ERCC3-206ENST00000462306 FAM163BP0C2L3 166 aa16.99■□□□□ 0.31
ERCC3-206ENST00000462306 EPB41P11171 864 aaKnown RBP16.99■□□□□ 0.31
ERCC3-206ENST00000462306 WARSP23381 471 aaKnown RBP16.99■□□□□ 0.31
ERCC3-206ENST00000462306 ACAT1P24752 427 aaKnown RBP16.99■□□□□ 0.31
ERCC3-206ENST00000462306 GCLMP48507 274 aa16.99■□□□□ 0.31
ERCC3-206ENST00000462306 MYL7Q01449 175 aa16.99■□□□□ 0.31
ERCC3-206ENST00000462306 SMARCB1Q12824 385 aa16.99■□□□□ 0.31
ERCC3-206ENST00000462306 DCP1BQ8IZD4 617 aaKnown RBP16.99■□□□□ 0.31
ERCC3-206ENST00000462306 ZDHHC14Q8IZN3 488 aa16.99■□□□□ 0.31
ERCC3-206ENST00000462306 TDRD5Q8NAT2 981 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms